RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 JOSD1Q15040 202 aaPredicted RBP3.67□□□□□ -1.82
RIF1-207ENST00000454583 ATP5L2Q7Z4Y8 100 aa3.67□□□□□ -1.82
RIF1-207ENST00000454583 SPATA12Q7Z6I5 190 aa3.67□□□□□ -1.82
RIF1-207ENST00000454583 NIT1Q86X76 327 aa3.67□□□□□ -1.82
RIF1-207ENST00000454583 NUDT10Q8NFP7 164 aa3.67□□□□□ -1.82
RIF1-207ENST00000454583 NUDT11Q96G61 164 aa3.67□□□□□ -1.82
RIF1-207ENST00000454583 FBXL7Q9UJT9 491 aa3.67□□□□□ -1.82
RIF1-207ENST00000454583 ACANP16112 2415 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 MUC4Q99102 2169 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 NXPH4O95158 308 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 S100A9P06702 114 aaKnown RBP3.66□□□□□ -1.82
RIF1-207ENST00000454583 OR10J3Q5JRS4 329 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 NHLRC2Q8NBF2 726 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 C22orf15Q8WYQ4 148 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 ZC2HC1AQ96GY0 325 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 CITED2Q99967 270 aaPredicted RBP3.66□□□□□ -1.82
RIF1-207ENST00000454583 SCRT2Q9NQ03 307 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 C21orf62Q9NYP8 219 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 IGHV7-4-1A0A0J9YVY3 117 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 IZUMO1RA6ND01 250 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 K7EQG2 157 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 RBMY1A1P0DJD3 496 aaKnown RBP3.66□□□□□ -1.82
RIF1-207ENST00000454583 RBMY1CP0DJD4 496 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 HIST1H1EP10412 219 aaKnown RBP3.66□□□□□ -1.82
RIF1-207ENST00000454583 HNF4GQ14541 408 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 RBMY1FQ15415 496 aaKnown RBP3.66□□□□□ -1.82
RIF1-207ENST00000454583 UFSP1Q6NVU6 142 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 TEX43Q6ZNM6 134 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 NUP35Q8NFH5 326 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 DLX4Q92988 240 aaPredicted RBP3.66□□□□□ -1.82
RIF1-207ENST00000454583 PAXXQ9BUH6 204 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 RNASE7Q9H1E1 156 aaKnown RBP3.66□□□□□ -1.82
RIF1-207ENST00000454583 LINC00527Q9UJ94 153 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 DYNC1H1Q14204 4646 aaKnown RBP3.66□□□□□ -1.82
RIF1-207ENST00000454583 IGLV2-18A0A075B6J9 118 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 TRAV30A0A087WSZ9 112 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 C2orf70A6NJV1 201 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 ZNF80P51504 273 aaPredicted RBP3.66□□□□□ -1.82
RIF1-207ENST00000454583 RAB5BP61020 215 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 SLAQ13239 276 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 KIR3DS1Q14943 382 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 Q6ZWC4 215 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 STXBP6Q8NFX7 210 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 OR4X2Q8NGF9 303 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 TSKUQ8WUA8 353 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 GRAMD2BQ96HH9 432 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 Q9H3A6 140 aa3.66□□□□□ -1.82
RIF1-207ENST00000454583 ZNF331Q9NQX6 463 aaPredicted RBP3.66□□□□□ -1.82
RIF1-207ENST00000454583 PEF1Q9UBV8 284 aaKnown RBP3.66□□□□□ -1.82
RIF1-207ENST00000454583 A0A1B0GUS0 222 aa3.65□□□□□ -1.82
RIF1-207ENST00000454583 C1orf196B1AJZ1 125 aa3.65□□□□□ -1.82
RIF1-207ENST00000454583 SUB1P53999 127 aaKnown RBP eCLIP3.65□□□□□ -1.821e-6■■■■■ 30.7
RIF1-207ENST00000454583 PSG3Q16557 428 aa3.65□□□□□ -1.82
RIF1-207ENST00000454583 UNQ5815/PRO19632Q6UWF5 114 aa3.65□□□□□ -1.82
RIF1-207ENST00000454583 OR2K2Q8NGT1 345 aa3.65□□□□□ -1.82
RIF1-207ENST00000454583 HELTA6NFD8 242 aa3.65□□□□□ -1.83
RIF1-207ENST00000454583 CLEC3BP05452 202 aa3.65□□□□□ -1.83
RIF1-207ENST00000454583 HOXD3P31249 432 aaPredicted RBP3.65□□□□□ -1.83
RIF1-207ENST00000454583 UBE2G2P60604 165 aa3.65□□□□□ -1.83
RIF1-207ENST00000454583 GNG5P63218 68 aa3.65□□□□□ -1.83
RIF1-207ENST00000454583 DEFB114Q30KQ6 69 aa3.65□□□□□ -1.83
RIF1-207ENST00000454583 C5orf17Q8NAS9 161 aa3.65□□□□□ -1.83
RIF1-207ENST00000454583 OR5T1Q8NG75 326 aa3.65□□□□□ -1.83
RIF1-207ENST00000454583 RNF125Q96EQ8 232 aa3.65□□□□□ -1.83
RIF1-207ENST00000454583 RCHY1Q96PM5 261 aa3.65□□□□□ -1.83
RIF1-207ENST00000454583 SMPXQ9UHP9 88 aa3.65□□□□□ -1.83
RIF1-207ENST00000454583 OR2T8A6NH00 312 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 KLLNB2CW77 178 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 M0R036 132 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 SLC25A5P05141 298 aaKnown RBP3.64□□□□□ -1.83
RIF1-207ENST00000454583 NBEAP1P0C6P0 100 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 CRISP2P16562 243 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 PRR9Q5T870 116 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 C9orf47Q6ZRZ4 202 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 TMEM256Q8N2U0 113 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 RNASE11Q8TAA1 199 aaKnown RBP3.64□□□□□ -1.83
RIF1-207ENST00000454583 RNF185Q96GF1 192 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 C12orf57Q99622 126 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 ALKBH7Q9BT30 221 aaPredicted RBP3.64□□□□□ -1.83
RIF1-207ENST00000454583 C11orf21Q9P2W6 132 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 TSSC4Q9Y5U2 329 aaPredicted RBP3.64□□□□□ -1.83
RIF1-207ENST00000454583 TENM3Q9P273 2699 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 ZNF324O75467 553 aaPredicted RBP3.64□□□□□ -1.83
RIF1-207ENST00000454583 IGHV3-48P01763 117 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 APELAP0DMC3 54 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 MFAP4P55083 255 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 TAS2R45P59539 299 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 SAPCD1Q5SSQ6 148 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 EEF1AKMT3Q96AZ1 226 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 GPR82Q96P67 336 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 ODF3Q96PU9 254 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 GPR61Q9BZJ8 451 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 TRBV7-9A0A0J9YWB2 115 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 SERTM2A0A1B0GWG4 89 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 SNAI2O43623 268 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 HYPMO75409 117 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 SLURP1P55000 103 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 ADIRFQ15847 76 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 C8orf86Q6ZUL3 223 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 LINC00612Q8N6U2 182 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms