RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 LGALS1P09382 135 aaKnown RBP11.96□□□□□ -0.49
SNX13-204ENST00000444712 SRIP30626 198 aa11.96□□□□□ -0.49
SNX13-204ENST00000444712 S100A12P80511 92 aa11.96□□□□□ -0.49
SNX13-204ENST00000444712 SLAQ13239 276 aa11.96□□□□□ -0.49
SNX13-204ENST00000444712 PYY3Q5JQD4 70 aa11.96□□□□□ -0.49
SNX13-204ENST00000444712 HIST2H2BCQ6DN03 193 aa11.96□□□□□ -0.49
SNX13-204ENST00000444712 Q8TAT8 98 aa11.96□□□□□ -0.49
SNX13-204ENST00000444712 UBE2E2Q96LR5 201 aa11.96□□□□□ -0.49
SNX13-204ENST00000444712 ASCL2Q99929 193 aa11.96□□□□□ -0.49
SNX13-204ENST00000444712 RHPN1-AS1Q9BWJ2 59 aa11.96□□□□□ -0.49
SNX13-204ENST00000444712 SMPXQ9UHP9 88 aa11.96□□□□□ -0.49
SNX13-204ENST00000444712 LENEPQ9Y5L5 61 aa11.96□□□□□ -0.49
SNX13-204ENST00000444712 FABP5P3A8MUU1 101 aa11.96□□□□□ -0.5
SNX13-204ENST00000444712 ZNF138P52744 262 aa11.96□□□□□ -0.5
SNX13-204ENST00000444712 Q71RC1 249 aaPredicted RBP11.96□□□□□ -0.5
SNX13-204ENST00000444712 PRAC2D3DTV9 90 aa11.95□□□□□ -0.5
SNX13-204ENST00000444712 OVOL1O14753 267 aa11.95□□□□□ -0.5
SNX13-204ENST00000444712 RPLP1P05386 114 aaKnown RBP11.95□□□□□ -0.5
SNX13-204ENST00000444712 KIAA1644Q3SXP7 199 aa11.95□□□□□ -0.5
SNX13-204ENST00000444712 TMEM256Q8N2U0 113 aa11.95□□□□□ -0.5
SNX13-204ENST00000444712 POLQO75417 2590 aa11.95□□□□□ -0.5
SNX13-204ENST00000444712 GZMBP10144 247 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 GDF5OSQ5U4N7 250 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 IL17RELQ6ZVW7 336 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 GATD1Q8NB37 220 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 ZNF738Q8NE65 137 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 CELSR2Q9HCU4 2923 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 SOCS3O14543 225 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 CD5LO43866 347 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 SERF1AO75920 110 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 HIST1H1AQ02539 215 aaPredicted RBP11.94□□□□□ -0.5
SNX13-204ENST00000444712 ERCC8Q13216 396 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 SCGB2A2Q13296 93 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 TM4SF20Q53R12 229 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 REC114Q7Z4M0 266 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 AGPAT4-IT1Q9H0P7 198 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 TP53TG3Q9ULZ0 132 aa11.94□□□□□ -0.5
SNX13-204ENST00000444712 LGALS9O00182 355 aa11.93□□□□□ -0.5
SNX13-204ENST00000444712 PRB4P10163 310 aaPredicted RBP11.93□□□□□ -0.5
SNX13-204ENST00000444712 RPL11P62913 178 aaKnown RBP11.93□□□□□ -0.5
SNX13-204ENST00000444712 KLF5Q13887 457 aaPredicted RBP11.93□□□□□ -0.5
SNX13-204ENST00000444712 JOSD1Q15040 202 aaPredicted RBP11.93□□□□□ -0.5
SNX13-204ENST00000444712 LINC00477Q96M19 166 aa11.93□□□□□ -0.5
SNX13-204ENST00000444712 C10orf99Q6UWK7 81 aa11.93□□□□□ -0.5
SNX13-204ENST00000444712 OR10J6PQ8NGY7 276 aa11.93□□□□□ -0.5
SNX13-204ENST00000444712 CSMD1Q96PZ7 3565 aa11.92□□□□□ -0.5
SNX13-204ENST00000444712 A0A1B0GUS0 222 aa11.92□□□□□ -0.5
SNX13-204ENST00000444712 ID1P41134 155 aa11.92□□□□□ -0.5
SNX13-204ENST00000444712 LINC01559Q495D7 138 aa11.92□□□□□ -0.5
SNX13-204ENST00000444712 KCNS1Q96KK3 526 aa11.92□□□□□ -0.5
SNX13-204ENST00000444712 ALKBH7Q9BT30 221 aaPredicted RBP11.92□□□□□ -0.5
SNX13-204ENST00000444712 SSBP4Q9BWG4 385 aaPredicted RBP11.92□□□□□ -0.5
SNX13-204ENST00000444712 CREBBPQ92793 2442 aa11.92□□□□□ -0.5
SNX13-204ENST00000444712 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
SNX13-204ENST00000444712 ZNF80P51504 273 aaPredicted RBP11.91□□□□□ -0.5
SNX13-204ENST00000444712 C18orf32Q8TCD1 76 aa11.91□□□□□ -0.5
SNX13-204ENST00000444712 SAMD10Q9BYL1 202 aa11.91□□□□□ -0.5
SNX13-204ENST00000444712 ABCA12Q86UK0 2595 aa11.91□□□□□ -0.5
SNX13-204ENST00000444712 PCP4L1A6NKN8 68 aa11.91□□□□□ -0.5
SNX13-204ENST00000444712 LINC00310P59036 64 aa11.91□□□□□ -0.5
SNX13-204ENST00000444712 SVEP1Q4LDE5 3571 aa11.91□□□□□ -0.5
SNX13-204ENST00000444712 TRBV7-9A0A0J9YWB2 115 aa11.9□□□□□ -0.5
SNX13-204ENST00000444712 NUPR1O60356 82 aa11.9□□□□□ -0.5
SNX13-204ENST00000444712 ORM1P02763 201 aa11.9□□□□□ -0.5
SNX13-204ENST00000444712 CTRLP40313 264 aa11.9□□□□□ -0.5
SNX13-204ENST00000444712 FER1L6-AS1Q8NA97 138 aa11.9□□□□□ -0.5
SNX13-204ENST00000444712 APCP25054 2843 aa11.9□□□□□ -0.51
SNX13-204ENST00000444712 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
SNX13-204ENST00000444712 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
SNX13-204ENST00000444712 LYZL1Q6UWQ5 148 aa11.89□□□□□ -0.51
SNX13-204ENST00000444712 ZNF493Q6ZR52 646 aa11.89□□□□□ -0.51
SNX13-204ENST00000444712 KLHDC1Q8N7A1 406 aa11.89□□□□□ -0.51
SNX13-204ENST00000444712 C20orf173Q96LM9 149 aa11.89□□□□□ -0.51
SNX13-204ENST00000444712 TPPP3Q9BW30 176 aa11.89□□□□□ -0.51
SNX13-204ENST00000444712 TMSB15BA0A087X1C1 80 aa11.89□□□□□ -0.51
SNX13-204ENST00000444712 TMEM213A2RRL7 107 aa11.89□□□□□ -0.51
SNX13-204ENST00000444712 F2Z2F3 143 aa11.89□□□□□ -0.51
SNX13-204ENST00000444712 IGLC6P0CF74 106 aa11.89□□□□□ -0.51
SNX13-204ENST00000444712 CELSR1Q9NYQ6 3014 aa11.89□□□□□ -0.51
SNX13-204ENST00000444712 CSMD2Q7Z408 3487 aa11.88□□□□□ -0.51
SNX13-204ENST00000444712 CENPEQ02224 2701 aa11.88□□□□□ -0.51
SNX13-204ENST00000444712 IGHV4OR15-8A0A075B7B6 117 aa11.87□□□□□ -0.51
SNX13-204ENST00000444712 A0A087WW49 117 aa11.87□□□□□ -0.51
SNX13-204ENST00000444712 DNAJC9-AS1A6NH13 148 aa11.87□□□□□ -0.51
SNX13-204ENST00000444712 M0QZ24 198 aa11.87□□□□□ -0.51
SNX13-204ENST00000444712 IQCJQ1A5X6 159 aa11.87□□□□□ -0.51
SNX13-204ENST00000444712 DUX5Q96PT3 197 aa11.87□□□□□ -0.51
SNX13-204ENST00000444712 YAE1D1Q9NRH1 226 aa11.87□□□□□ -0.51
SNX13-204ENST00000444712 GPX1P07203 203 aa11.87□□□□□ -0.51
SNX13-204ENST00000444712 HOXD3P31249 432 aaPredicted RBP11.87□□□□□ -0.51
SNX13-204ENST00000444712 KRTAP1-1Q07627 177 aa11.87□□□□□ -0.51
SNX13-204ENST00000444712 CHD6Q8TD26 2715 aa11.87□□□□□ -0.51
SNX13-204ENST00000444712 ZNF324O75467 553 aaPredicted RBP11.86□□□□□ -0.51
SNX13-204ENST00000444712 AMTP48728 403 aa11.86□□□□□ -0.51
SNX13-204ENST00000444712 OR8A1Q8NGG7 326 aa11.86□□□□□ -0.51
SNX13-204ENST00000444712 C4orf3Q8WVX3 66 aa11.86□□□□□ -0.51
SNX13-204ENST00000444712 WFDC12Q8WWY7 111 aa11.86□□□□□ -0.51
SNX13-204ENST00000444712 RCHY1Q96PM5 261 aa11.86□□□□□ -0.51
SNX13-204ENST00000444712 CNFNQ9BYD5 112 aa11.86□□□□□ -0.51
SNX13-204ENST00000444712 FAM181BA6NEQ2 426 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms