RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 ORMDL3Q8N138 153 aa12.34□□□□□ -0.43
SHQ1-202ENST00000444040 RNF182Q8N6D2 247 aa12.34□□□□□ -0.43
SHQ1-202ENST00000444040 OR10AG1Q8NH19 301 aa12.34□□□□□ -0.43
SHQ1-202ENST00000444040 PRELID3AQ96N28 172 aa12.34□□□□□ -0.43
SHQ1-202ENST00000444040 TRBV7-1A0A0A6YYK4 115 aa12.33□□□□□ -0.43
SHQ1-202ENST00000444040 RBAKDNA6NC62 111 aa12.33□□□□□ -0.43
SHQ1-202ENST00000444040 LOXL1Q08397 574 aaPredicted RBP12.33□□□□□ -0.43
SHQ1-202ENST00000444040 HINT1P49773 126 aaPredicted RBP12.33□□□□□ -0.44
SHQ1-202ENST00000444040 C19orf54Q5BKX5 351 aa12.33□□□□□ -0.44
SHQ1-202ENST00000444040 PIFOQ8TCI5 191 aa12.33□□□□□ -0.44
SHQ1-202ENST00000444040 SLC50A1Q9BRV3 221 aa12.33□□□□□ -0.44
SHQ1-202ENST00000444040 TP73-AS1Q9UF72 201 aa12.33□□□□□ -0.44
SHQ1-202ENST00000444040 FABP5P3A8MUU1 101 aa12.33□□□□□ -0.44
SHQ1-202ENST00000444040 TMEM219Q86XT9 240 aa12.33□□□□□ -0.44
SHQ1-202ENST00000444040 CNFNQ9BYD5 112 aa12.33□□□□□ -0.44
SHQ1-202ENST00000444040 TIMM8BQ9Y5J9 83 aaPredicted RBP12.33□□□□□ -0.44
SHQ1-202ENST00000444040 IGHV3OR16-13A0A075B7E8 117 aa12.32□□□□□ -0.44
SHQ1-202ENST00000444040 IGHV3-74A0A0B4J1X5 117 aa12.32□□□□□ -0.44
SHQ1-202ENST00000444040 NPSP0C0P6 89 aa12.32□□□□□ -0.44
SHQ1-202ENST00000444040 TWIST1Q15672 202 aa12.32□□□□□ -0.44
SHQ1-202ENST00000444040 U3KQE9 123 aa12.32□□□□□ -0.44
SHQ1-202ENST00000444040 NCOR2Q9Y618 2525 aa12.32□□□□□ -0.44
SHQ1-202ENST00000444040 TRAV8-2A0A0B4J237 113 aa12.32□□□□□ -0.44
SHQ1-202ENST00000444040 LOC389332A0A1B0GUA5 103 aa12.32□□□□□ -0.44
SHQ1-202ENST00000444040 ORM1P02763 201 aa12.32□□□□□ -0.44
SHQ1-202ENST00000444040 CHD8Q9HCK8 2581 aa12.32□□□□□ -0.44
SHQ1-202ENST00000444040 ITPR1Q14643 2758 aa12.31□□□□□ -0.44
SHQ1-202ENST00000444040 H0Y8G0 127 aa12.31□□□□□ -0.44
SHQ1-202ENST00000444040 LINC01559Q495D7 138 aa12.31□□□□□ -0.44
SHQ1-202ENST00000444040 MOB4Q9Y3A3 225 aa12.31□□□□□ -0.44
SHQ1-202ENST00000444040 IGHV3OR16-10A0A075B7F0 116 aa12.31□□□□□ -0.44
SHQ1-202ENST00000444040 IL17RELQ6ZVW7 336 aa12.31□□□□□ -0.44
SHQ1-202ENST00000444040 PMCHL2Q9BQD1 86 aa12.31□□□□□ -0.44
SHQ1-202ENST00000444040 GOLT1BQ9Y3E0 138 aa12.31□□□□□ -0.44
SHQ1-202ENST00000444040 NCR2O95944 276 aa12.3□□□□□ -0.44
SHQ1-202ENST00000444040 METTL26Q96S19 204 aa12.3□□□□□ -0.44
SHQ1-202ENST00000444040 AGPAT4-IT1Q9H0P7 198 aa12.3□□□□□ -0.44
SHQ1-202ENST00000444040 SCRT2Q9NQ03 307 aa12.3□□□□□ -0.44
SHQ1-202ENST00000444040 MSRB1Q9NZV6 116 aa12.3□□□□□ -0.44
SHQ1-202ENST00000444040 IGHV3-49A0A0A0MS15 119 aa12.3□□□□□ -0.44
SHQ1-202ENST00000444040 ZNF207O43670 478 aaKnown RBP12.3□□□□□ -0.44
SHQ1-202ENST00000444040 CRIP2P52943 208 aaPredicted RBP12.3□□□□□ -0.44
SHQ1-202ENST00000444040 ATP5G2Q06055 141 aa12.3□□□□□ -0.44
SHQ1-202ENST00000444040 TRAV41A0A0B4J266 112 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 IGHV1-69DA0A0B4J2H0 117 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 SMKR1H3BMG3 65 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 NPYP01303 97 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 IGHV1-69P01742 117 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 RNF185Q96GF1 192 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 ATP6V0BQ99437 205 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 MS4A6AQ9H2W1 248 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 ZFHX3Q15911 3703 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 HSBP1L1C9JCN9 74 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 CKS2P33552 79 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 LINC00527Q9UJ94 153 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 CACNA1BQ00975 2339 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 IGHV4-61A0A0C4DH41 118 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 BRD3OSQ6XYD6 125 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 C8orf86Q6ZUL3 223 aa12.29□□□□□ -0.44
SHQ1-202ENST00000444040 AKAP6Q13023 2319 aa12.28□□□□□ -0.44
SHQ1-202ENST00000444040 SLC25A34Q6PIV7 304 aa12.28□□□□□ -0.44
SHQ1-202ENST00000444040 MRPL53Q96EL3 112 aaKnown RBP12.28□□□□□ -0.44
SHQ1-202ENST00000444040 IGKV3D-20A0A0C4DH25 116 aa12.28□□□□□ -0.44
SHQ1-202ENST00000444040 FAM223BA6NKX1 122 aa12.28□□□□□ -0.44
SHQ1-202ENST00000444040 FAM223AQ8IWN6 122 aa12.28□□□□□ -0.44
SHQ1-202ENST00000444040 MEGF9Q9H1U4 602 aa12.28□□□□□ -0.44
SHQ1-202ENST00000444040 C11orf21Q9P2W6 132 aa12.28□□□□□ -0.44
SHQ1-202ENST00000444040 TRAV40A0A0B4J280 105 aa12.27□□□□□ -0.45
SHQ1-202ENST00000444040 ABCA2Q9BZC7 2435 aa12.27□□□□□ -0.45
SHQ1-202ENST00000444040 PRSS57Q6UWY2 283 aa12.26□□□□□ -0.45
SHQ1-202ENST00000444040 FXYD7P58549 80 aa12.26□□□□□ -0.45
SHQ1-202ENST00000444040 HIST1H1AQ02539 215 aaPredicted RBP12.26□□□□□ -0.45
SHQ1-202ENST00000444040 PIMREGQ9BSJ6 248 aa12.26□□□□□ -0.45
SHQ1-202ENST00000444040 GAS8-AS1O95177 125 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 HBDP02042 147 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 C9orf47Q6ZRZ4 202 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 OR8A1Q8NGG7 326 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 C10orf105Q8TEF2 133 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 HIF1ANQ9NWT6 349 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 TRGV3P03979 118 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 PPIFP30405 207 aaKnown RBP12.25□□□□□ -0.45
SHQ1-202ENST00000444040 MPV17L2Q567V2 206 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 TMEM78Q5T7P6 136 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 Q6ZVH6 145 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 ORAOV1Q8WV07 137 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 GLMPQ8WWB7 406 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 PPP1R14DQ9NXH3 145 aa12.25□□□□□ -0.45
SHQ1-202ENST00000444040 TCF21O43680 179 aa12.24□□□□□ -0.45
SHQ1-202ENST00000444040 PPBPP02775 128 aa12.24□□□□□ -0.45
SHQ1-202ENST00000444040 IGF1P05019 195 aa12.24□□□□□ -0.45
SHQ1-202ENST00000444040 VPS13CQ709C8 3753 aa12.24□□□□□ -0.45
SHQ1-202ENST00000444040 IGHV4-38-2P0DP08 117 aa12.24□□□□□ -0.45
SHQ1-202ENST00000444040 LINC01546A6NGU7 62 aa12.24□□□□□ -0.45
SHQ1-202ENST00000444040 ARL3P36405 182 aa12.24□□□□□ -0.45
SHQ1-202ENST00000444040 LGALS9BQ3B8N2 356 aa12.24□□□□□ -0.45
SHQ1-202ENST00000444040 LGALS9CQ6DKI2 356 aa12.24□□□□□ -0.45
SHQ1-202ENST00000444040 NPFFR1Q9GZQ6 430 aa12.24□□□□□ -0.45
SHQ1-202ENST00000444040 TRBV12-3P01733 135 aa12.23□□□□□ -0.45
SHQ1-202ENST00000444040 COX11Q9Y6N1 276 aa12.23□□□□□ -0.45
SHQ1-202ENST00000444040 COX8AP10176 69 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms