RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 A6NN06 94 aa0.3□□□□□ -2.36
PFDN4-202ENST00000441080 C5orf58C9J3I9 102 aa0.3□□□□□ -2.36
PFDN4-202ENST00000441080 SULT1C4O75897 302 aa0.3□□□□□ -2.36
PFDN4-202ENST00000441080 IGHV3-30P01768 117 aa0.3□□□□□ -2.36
PFDN4-202ENST00000441080 IGHV3-30-5P0DP03 117 aa0.3□□□□□ -2.36
PFDN4-202ENST00000441080 FABP2P12104 132 aa0.3□□□□□ -2.36
PFDN4-202ENST00000441080 OR5AK2Q8NH90 309 aa0.3□□□□□ -2.36
PFDN4-202ENST00000441080 DIRC1Q969H9 104 aa0.3□□□□□ -2.36
PFDN4-202ENST00000441080 LRTM1Q9HBL6 345 aa0.3□□□□□ -2.36
PFDN4-202ENST00000441080 BIN3Q9NQY0 253 aa0.3□□□□□ -2.36
PFDN4-202ENST00000441080 C3orf85A0A1B0GTC6 90 aa0.29□□□□□ -2.36
PFDN4-202ENST00000441080 TRACP01848 142 aa0.29□□□□□ -2.36
PFDN4-202ENST00000441080 CAV3P56539 151 aa0.29□□□□□ -2.36
PFDN4-202ENST00000441080 QRFPP83859 136 aa0.29□□□□□ -2.36
PFDN4-202ENST00000441080 CDC26Q8NHZ8 85 aa0.29□□□□□ -2.36
PFDN4-202ENST00000441080 ISOC1Q96CN7 298 aa0.29□□□□□ -2.36
PFDN4-202ENST00000441080 HOPXQ9BPY8 73 aaPredicted RBP0.29□□□□□ -2.36
PFDN4-202ENST00000441080 NAV2Q8IVL1 2488 aa0.29□□□□□ -2.36
PFDN4-202ENST00000441080 C3orf33Q6P1S2 294 aa0.28□□□□□ -2.36
PFDN4-202ENST00000441080 ANGPTL5Q86XS5 388 aa0.28□□□□□ -2.36
PFDN4-202ENST00000441080 AP1S3Q96PC3 154 aa0.28□□□□□ -2.36
PFDN4-202ENST00000441080 GID8Q9NWU2 228 aa0.28□□□□□ -2.36
PFDN4-202ENST00000441080 PTPRDP23468 1912 aa0.27□□□□□ -2.37
PFDN4-202ENST00000441080 TRDV1A0A1B0GX56 115 aa0.27□□□□□ -2.37
PFDN4-202ENST00000441080 SERPINB1P30740 379 aa0.27□□□□□ -2.37
PFDN4-202ENST00000441080 NDUFA6P56556 154 aa0.27□□□□□ -2.37
PFDN4-202ENST00000441080 OR5H6Q8NGV6 325 aa0.27□□□□□ -2.37
PFDN4-202ENST00000441080 LPAR5Q9H1C0 372 aa0.27□□□□□ -2.37
PFDN4-202ENST00000441080 BOLA2Q9H3K6 86 aa0.27□□□□□ -2.37
PFDN4-202ENST00000441080 KNTC1P50748 2209 aa0.27□□□□□ -2.37
PFDN4-202ENST00000441080 PIK3C2AO00443 1686 aa0.27□□□□□ -2.37
PFDN4-202ENST00000441080 TMEM238C9JI98 176 aa0.26□□□□□ -2.37
PFDN4-202ENST00000441080 RPS3P23396 243 aaKnown RBP eCLIP0.26□□□□□ -2.37
PFDN4-202ENST00000441080 XAF1Q6GPH4 301 aa0.26□□□□□ -2.37
PFDN4-202ENST00000441080 DCUN1D2Q6PH85 259 aa0.26□□□□□ -2.37
PFDN4-202ENST00000441080 C10orf99Q6UWK7 81 aa0.26□□□□□ -2.37
PFDN4-202ENST00000441080 CLEC2BQ92478 149 aa0.26□□□□□ -2.37
PFDN4-202ENST00000441080 CIB3Q96Q77 187 aaPredicted RBP0.26□□□□□ -2.37
PFDN4-202ENST00000441080 YTHDC2Q9H6S0 1430 aaKnown RBP0.26□□□□□ -2.37
PFDN4-202ENST00000441080 TRAPPC8Q9Y2L5 1435 aa0.26□□□□□ -2.37
PFDN4-202ENST00000441080 TNCP24821 2201 aa0.26□□□□□ -2.37
PFDN4-202ENST00000441080 TECPR2O15040 1411 aa0.25□□□□□ -2.37
PFDN4-202ENST00000441080 GABARAPH6UMI1 98 aa0.25□□□□□ -2.37
PFDN4-202ENST00000441080 GYPBP06028 91 aa0.25□□□□□ -2.37
PFDN4-202ENST00000441080 TPT1P13693 172 aaKnown RBP0.25□□□□□ -2.37
PFDN4-202ENST00000441080 CRYBA4P53673 196 aa0.25□□□□□ -2.37
PFDN4-202ENST00000441080 SNRPD3P62318 126 aaKnown RBP0.25□□□□□ -2.37
PFDN4-202ENST00000441080 PRELID3AQ96N28 172 aa0.25□□□□□ -2.37
PFDN4-202ENST00000441080 DSPPQ9NZW4 1301 aa0.24□□□□□ -2.37
PFDN4-202ENST00000441080 PPP5D1E7EU14 171 aa0.24□□□□□ -2.37
PFDN4-202ENST00000441080 H7BYZ3 331 aa0.24□□□□□ -2.37
PFDN4-202ENST00000441080 LY6G6CO95867 125 aa0.24□□□□□ -2.37
PFDN4-202ENST00000441080 SDC2P34741 201 aa0.24□□□□□ -2.37
PFDN4-202ENST00000441080 SPINK6Q6UWN8 80 aa0.24□□□□□ -2.37
PFDN4-202ENST00000441080 IZUMO2Q6UXV1 221 aa0.24□□□□□ -2.37
PFDN4-202ENST00000441080 MAP1LC3B2A6NCE7 125 aa0.23□□□□□ -2.37
PFDN4-202ENST00000441080 PRORSD1PA6NEY8 169 aa0.23□□□□□ -2.37
PFDN4-202ENST00000441080 BBIP1A8MTZ0 92 aa0.23□□□□□ -2.37
PFDN4-202ENST00000441080 BCL2P10415 239 aa0.23□□□□□ -2.37
PFDN4-202ENST00000441080 SPINK13Q1W4C9 94 aa0.23□□□□□ -2.37
PFDN4-202ENST00000441080 GLYATL3Q5SZD4 288 aa0.23□□□□□ -2.37
PFDN4-202ENST00000441080 TRIQKQ629K1 86 aa0.23□□□□□ -2.37
PFDN4-202ENST00000441080 CSAG1Q6PB30 78 aa0.23□□□□□ -2.37
PFDN4-202ENST00000441080 TMEM229BQ8NBD8 167 aa0.23□□□□□ -2.37
PFDN4-202ENST00000441080 LAMTOR2Q9Y2Q5 125 aa0.23□□□□□ -2.37
PFDN4-202ENST00000441080 LOC107984156A0A0G2JMH3 177 aa0.22□□□□□ -2.37
PFDN4-202ENST00000441080 ARL5CA6NH57 179 aa0.22□□□□□ -2.37
PFDN4-202ENST00000441080 S100A11P31949 105 aa0.22□□□□□ -2.37
PFDN4-202ENST00000441080 MAXP61244 160 aa0.22□□□□□ -2.37
PFDN4-202ENST00000441080 C3orf62Q6ZUJ4 267 aa0.22□□□□□ -2.37
PFDN4-202ENST00000441080 ARL17AQ8IVW1 177 aa0.22□□□□□ -2.37
PFDN4-202ENST00000441080 TCTEX1D1Q8N7M0 179 aa0.22□□□□□ -2.37
PFDN4-202ENST00000441080 MYH2Q9UKX2 1941 aa0.22□□□□□ -2.37
PFDN4-202ENST00000441080 A0A1W2PPB8 328 aa0.21□□□□□ -2.38
PFDN4-202ENST00000441080 A0A1W2PRS3 328 aa0.21□□□□□ -2.38
PFDN4-202ENST00000441080 KIR3DP1A8MWS1 328 aa0.21□□□□□ -2.38
PFDN4-202ENST00000441080 SAA1P0DJI8 122 aaPredicted RBP0.21□□□□□ -2.38
PFDN4-202ENST00000441080 LINC00305Q7Z4B0 112 aa0.21□□□□□ -2.38
PFDN4-202ENST00000441080 LINC00208Q96KT6 92 aa0.21□□□□□ -2.38
PFDN4-202ENST00000441080 NABP2Q9BQ15 211 aa0.21□□□□□ -2.38
PFDN4-202ENST00000441080 CCDC32Q9BV29 185 aa0.21□□□□□ -2.38
PFDN4-202ENST00000441080 FKBP11Q9NYL4 201 aa0.21□□□□□ -2.38
PFDN4-202ENST00000441080 LOC285556D6RIA3 1793 aa0.2□□□□□ -2.38
PFDN4-202ENST00000441080 TRBV27A0A0K0K1C4 114 aa0.2□□□□□ -2.38
PFDN4-202ENST00000441080 E5RI56 91 aa0.2□□□□□ -2.38
PFDN4-202ENST00000441080 EVI2AP22794 236 aa0.2□□□□□ -2.38
PFDN4-202ENST00000441080 G0S2P27469 103 aa0.2□□□□□ -2.38
PFDN4-202ENST00000441080 STX12Q86Y82 276 aa0.2□□□□□ -2.38
PFDN4-202ENST00000441080 FAT4Q6V0I7 4981 aa0.2□□□□□ -2.38
PFDN4-202ENST00000441080 MEGF8Q7Z7M0 2845 aa0.19□□□□□ -2.38
PFDN4-202ENST00000441080 ADGBQ8N7X0 1667 aa0.19□□□□□ -2.38
PFDN4-202ENST00000441080 PFDN1O60925 122 aa0.19□□□□□ -2.38
PFDN4-202ENST00000441080 DNAJB13P59910 316 aa0.19□□□□□ -2.38
PFDN4-202ENST00000441080 TMEM78Q5T7P6 136 aa0.19□□□□□ -2.38
PFDN4-202ENST00000441080 TEX29Q8N6K0 151 aa0.19□□□□□ -2.38
PFDN4-202ENST00000441080 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.19□□□□□ -2.38
PFDN4-202ENST00000441080 MPC1Q9Y5U8 109 aa0.19□□□□□ -2.38
PFDN4-202ENST00000441080 LOC107986453A0A1B0GWG9 222 aa0.18□□□□□ -2.38
PFDN4-202ENST00000441080 GNG10P50151 68 aa0.18□□□□□ -2.38
PFDN4-202ENST00000441080 ZNF56Q15929 161 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms