RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 SPANXN5Q5MJ07 72 aa6.24□□□□□ -1.41
SMPD4-208ENST00000439029 LINC00305Q7Z4B0 112 aa6.24□□□□□ -1.41
SMPD4-208ENST00000439029 SH2D6Q7Z4S9 175 aa6.24□□□□□ -1.41
SMPD4-208ENST00000439029 OR4C5Q8NGB2 326 aa6.24□□□□□ -1.41
SMPD4-208ENST00000439029 LINC01600Q96MT4 127 aa6.24□□□□□ -1.41
SMPD4-208ENST00000439029 AGPAT4-IT1Q9H0P7 198 aa6.24□□□□□ -1.41
SMPD4-208ENST00000439029 A0A0B4J2A0 478 aa6.23□□□□□ -1.41
SMPD4-208ENST00000439029 HPGDSO60760 199 aa6.23□□□□□ -1.41
SMPD4-208ENST00000439029 PLP1P60201 277 aa6.23□□□□□ -1.41
SMPD4-208ENST00000439029 SAT2Q96F10 170 aaPredicted RBP6.23□□□□□ -1.41
SMPD4-208ENST00000439029 FAM19A4Q96LR4 140 aa6.23□□□□□ -1.41
SMPD4-208ENST00000439029 SHPKQ9UHJ6 478 aa6.23□□□□□ -1.41
SMPD4-208ENST00000439029 PXMP4Q9Y6I8 212 aa6.23□□□□□ -1.41
SMPD4-208ENST00000439029 TRAV4A0A0B4J268 109 aa6.22□□□□□ -1.41
SMPD4-208ENST00000439029 A0A0D9SG52 128 aa6.22□□□□□ -1.41
SMPD4-208ENST00000439029 PFN1P07737 140 aaKnown RBP6.22□□□□□ -1.41
SMPD4-208ENST00000439029 IGLC2P0DOY2 106 aa6.22□□□□□ -1.41
SMPD4-208ENST00000439029 RRAS2P62070 204 aaPredicted RBP6.22□□□□□ -1.41
SMPD4-208ENST00000439029 SLC38A11Q08AI6 406 aa6.22□□□□□ -1.41
SMPD4-208ENST00000439029 TMEM183BQ1AE95 376 aa6.22□□□□□ -1.41
SMPD4-208ENST00000439029 BPIFA4PQ86YQ2 179 aa6.22□□□□□ -1.41
SMPD4-208ENST00000439029 CROCCP3Q8IVE0 287 aa6.22□□□□□ -1.41
SMPD4-208ENST00000439029 TMEM183AQ8IXX5 376 aa6.22□□□□□ -1.41
SMPD4-208ENST00000439029 ZFAND2AQ8N6M9 145 aa6.22□□□□□ -1.41
SMPD4-208ENST00000439029 RASL10AQ92737 203 aa6.22□□□□□ -1.41
SMPD4-208ENST00000439029 GPR132Q9UNW8 380 aa6.22□□□□□ -1.41
SMPD4-208ENST00000439029 IGKV2-40A0A087WW87 121 aaPredicted RBP6.21□□□□□ -1.42
SMPD4-208ENST00000439029 IGHV3-73A0A0B4J1V6 119 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 GGTLC3B5MD39 225 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 TMEM127O75204 238 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 PITX3O75364 302 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 IGKV2D-40P01614 121 aaPredicted RBP6.21□□□□□ -1.42
SMPD4-208ENST00000439029 APOA1P02647 267 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 GATA1P15976 413 aaPredicted RBP6.21□□□□□ -1.42
SMPD4-208ENST00000439029 GABARAPL2P60520 117 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 NEDD8Q15843 81 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 FFAR4Q5NUL3 377 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 FAM122CQ6P4D5 195 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 HSD17B11Q8NBQ5 300 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 MTFP1Q9UDX5 166 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 KCNIP3Q9Y2W7 256 aa6.21□□□□□ -1.42
SMPD4-208ENST00000439029 TRAV8-1A0A0A6YYK1 113 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 FAM25AB3EWG3 89 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 FAM25CB3EWG5 89 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 FAM25GB3EWG6 89 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 CRISP2P16562 243 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 TBPP20226 339 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 TAS2R19P59542 299 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 SELENOTP62341 195 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 RPP30P78346 268 aaKnown RBP6.2□□□□□ -1.42
SMPD4-208ENST00000439029 VWC2Q2TAL6 325 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 TOR2AQ5JU69 321 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 S100A7AQ86SG5 101 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 SLC25A29Q8N8R3 303 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 TMEM229BQ8NBD8 167 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 RAB2BQ8WUD1 216 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 RMI2Q96E14 147 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 GTSF1LQ9H1H1 148 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 COX11Q9Y6N1 276 aa6.2□□□□□ -1.42
SMPD4-208ENST00000439029 A0A0J9YXV3 536 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 FABP12A6NFH5 140 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 SYNGR2O43760 224 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 COX7A2P2O60397 106 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
SMPD4-208ENST00000439029 EXOC3-AS1Q8N2X6 119 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 OR51S1Q8NGJ8 323 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 Q8TAT8 98 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 UBE2WQ96B02 151 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 DPH3Q96FX2 82 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 SOSTQ9BQB4 213 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 SRRQ9GZT4 340 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 NAGKQ9UJ70 344 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 KLK12Q9UKR0 248 aa6.19□□□□□ -1.42
SMPD4-208ENST00000439029 STRAPQ9Y3F4 350 aaKnown RBP6.19□□□□□ -1.42
SMPD4-208ENST00000439029 A0A0U1RQV1 116 aa6.18□□□□□ -1.42
SMPD4-208ENST00000439029 DISC1C4P0D8 188 aa6.18□□□□□ -1.42
SMPD4-208ENST00000439029 GOSR2O14653 212 aa6.18□□□□□ -1.42
SMPD4-208ENST00000439029 AGPAT2O15120 278 aa6.18□□□□□ -1.42
SMPD4-208ENST00000439029 MED6O75586 246 aa6.18□□□□□ -1.42
SMPD4-208ENST00000439029 UBE2MP61081 183 aaKnown RBP6.18□□□□□ -1.42
SMPD4-208ENST00000439029 SURF2Q15527 256 aaPredicted RBP6.18□□□□□ -1.42
SMPD4-208ENST00000439029 IZUMO2Q6UXV1 221 aa6.18□□□□□ -1.42
SMPD4-208ENST00000439029 CIB3Q96Q77 187 aaPredicted RBP6.18□□□□□ -1.42
SMPD4-208ENST00000439029 PRADC1Q9BSG0 188 aa6.18□□□□□ -1.42
SMPD4-208ENST00000439029 SPXQ9BT56 116 aa6.18□□□□□ -1.42
SMPD4-208ENST00000439029 C5orf51A6NDU8 294 aa6.17□□□□□ -1.42
SMPD4-208ENST00000439029 FBLL1A6NHQ2 334 aaKnown RBP6.17□□□□□ -1.42
SMPD4-208ENST00000439029 PHOX2AO14813 284 aa6.17□□□□□ -1.42
SMPD4-208ENST00000439029 GNRH2O43555 120 aa6.17□□□□□ -1.42
SMPD4-208ENST00000439029 BAK1Q16611 211 aa6.17□□□□□ -1.42
SMPD4-208ENST00000439029 C10orf113Q5VZT2 155 aa6.17□□□□□ -1.42
SMPD4-208ENST00000439029 ZC2HC1AQ96GY0 325 aa6.17□□□□□ -1.42
SMPD4-208ENST00000439029 CCDC59Q9P031 241 aaKnown RBP6.17□□□□□ -1.42
SMPD4-208ENST00000439029 EXTL2Q9UBQ6 330 aa6.17□□□□□ -1.42
SMPD4-208ENST00000439029 RNF24Q9Y225 148 aa6.17□□□□□ -1.42
SMPD4-208ENST00000439029 KIF25-AS1Q9Y6Z4 181 aa6.17□□□□□ -1.42
SMPD4-208ENST00000439029 GAGE12JA6NER3 117 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 USP17L23D6RBM5 183 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 M0R2P5 195 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms