RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 EXOC3-AS1Q8N2X6 119 aa12.51□□□□□ -0.41
GTF3A-204ENST00000438571 TMEM252Q8N6L7 170 aa12.51□□□□□ -0.41
GTF3A-204ENST00000438571 FAM19A4Q96LR4 140 aa12.51□□□□□ -0.41
GTF3A-204ENST00000438571 C2orf50Q96LR7 162 aa12.51□□□□□ -0.41
GTF3A-204ENST00000438571 PFDN5Q99471 154 aa12.51□□□□□ -0.41
GTF3A-204ENST00000438571 LYRM2Q9NU23 88 aaPredicted RBP12.51□□□□□ -0.41
GTF3A-204ENST00000438571 KLLNB2CW77 178 aa12.5□□□□□ -0.41
GTF3A-204ENST00000438571 ZNF253O75346 499 aa12.5□□□□□ -0.41
GTF3A-204ENST00000438571 FGF7P21781 194 aa12.5□□□□□ -0.41
GTF3A-204ENST00000438571 SULT1A1P50225 295 aa12.5□□□□□ -0.41
GTF3A-204ENST00000438571 IL15RAQ13261 267 aa12.5□□□□□ -0.41
GTF3A-204ENST00000438571 RAB31Q13636 194 aa12.5□□□□□ -0.41
GTF3A-204ENST00000438571 C12orf45Q8N5I9 185 aaPredicted RBP12.5□□□□□ -0.41
GTF3A-204ENST00000438571 MRPL53Q96EL3 112 aaKnown RBP12.5□□□□□ -0.41
GTF3A-204ENST00000438571 AGPAT4-IT1Q9H0P7 198 aa12.5□□□□□ -0.41
GTF3A-204ENST00000438571 KLF12Q9Y4X4 402 aa12.5□□□□□ -0.41
GTF3A-204ENST00000438571 IGKV2-40A0A087WW87 121 aaPredicted RBP12.49□□□□□ -0.41
GTF3A-204ENST00000438571 H3BNG1 76 aa12.49□□□□□ -0.41
GTF3A-204ENST00000438571 ZNF324O75467 553 aaPredicted RBP12.49□□□□□ -0.41
GTF3A-204ENST00000438571 IGKV2D-40P01614 121 aaPredicted RBP12.49□□□□□ -0.41
GTF3A-204ENST00000438571 SLC25A5P05141 298 aaKnown RBP12.49□□□□□ -0.41
GTF3A-204ENST00000438571 BLNKQ8WV28 456 aa12.49□□□□□ -0.41
GTF3A-204ENST00000438571 TP53TG3Q9ULZ0 132 aa12.49□□□□□ -0.41
GTF3A-204ENST00000438571 TRGV1A0A0A0MS02 117 aa12.48□□□□□ -0.41
GTF3A-204ENST00000438571 FUSP35637 526 aaKnown RBP eCLIP12.48□□□□□ -0.41
GTF3A-204ENST00000438571 SLC25A2Q9BXI2 301 aa12.48□□□□□ -0.41
GTF3A-204ENST00000438571 TMEM14CQ9P0S9 112 aa12.48□□□□□ -0.41
GTF3A-204ENST00000438571 TRGV2A0A075B6R0 118 aa12.47□□□□□ -0.41
GTF3A-204ENST00000438571 HIST1H1EP10412 219 aaKnown RBP12.47□□□□□ -0.41
GTF3A-204ENST00000438571 PVALBP20472 110 aaPredicted RBP12.47□□□□□ -0.41
GTF3A-204ENST00000438571 LINC00315P59091 139 aa12.47□□□□□ -0.41
GTF3A-204ENST00000438571 Q6ZRN7 208 aaPredicted RBP12.47□□□□□ -0.41
GTF3A-204ENST00000438571 GPN1Q9HCN4 374 aaPredicted RBP12.47□□□□□ -0.41
GTF3A-204ENST00000438571 FUT9Q9Y231 359 aa12.47□□□□□ -0.41
GTF3A-204ENST00000438571 A0A1W2PPQ1 181 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 SPINK4O60575 86 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 IGHV3-53P01767 116 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 H2AFB2P0C5Z0 115 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 S100A11P31949 105 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 RNASE4P34096 147 aaKnown RBP12.46□□□□□ -0.41
GTF3A-204ENST00000438571 TCL1AP56279 114 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 ICAM4Q14773 271 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 FAM122CQ6P4D5 195 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 MIR17HGQ75NE6 70 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 Q8N1X5 172 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 EIF4E3Q8N5X7 224 aaKnown RBP12.46□□□□□ -0.41
GTF3A-204ENST00000438571 ZFAND2AQ8N6M9 145 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 ZNF680Q8NEM1 530 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 THAP6Q8TBB0 222 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 FAM167A-AS1Q96KT0 104 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 C18orf15Q96N68 181 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 VGLL1Q99990 258 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 NPCDR1Q9BY65 106 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 MRPL16Q9NX20 251 aaKnown RBP12.46□□□□□ -0.41
GTF3A-204ENST00000438571 TIMM9Q9Y5J7 89 aa12.46□□□□□ -0.41
GTF3A-204ENST00000438571 CRISP2P16562 243 aa12.45□□□□□ -0.42
GTF3A-204ENST00000438571 ANXA2RQ3ZCQ2 193 aa12.45□□□□□ -0.42
GTF3A-204ENST00000438571 STX12Q86Y82 276 aa12.45□□□□□ -0.42
GTF3A-204ENST00000438571 CHAC2Q8WUX2 184 aa12.45□□□□□ -0.42
GTF3A-204ENST00000438571 LINC00467Q9BRT7 94 aa12.45□□□□□ -0.42
GTF3A-204ENST00000438571 PRELID1Q9Y255 219 aa12.45□□□□□ -0.42
GTF3A-204ENST00000438571 BTF3P20290 206 aaKnown RBP12.44□□□□□ -0.42
GTF3A-204ENST00000438571 HBG1P69891 147 aa12.44□□□□□ -0.42
GTF3A-204ENST00000438571 HBG2P69892 147 aa12.44□□□□□ -0.42
GTF3A-204ENST00000438571 NHLH2Q02577 135 aa12.44□□□□□ -0.42
GTF3A-204ENST00000438571 PDE6HQ13956 83 aa12.44□□□□□ -0.42
GTF3A-204ENST00000438571 C9orf47Q6ZRZ4 202 aa12.44□□□□□ -0.42
GTF3A-204ENST00000438571 Q8TAT8 98 aa12.44□□□□□ -0.42
GTF3A-204ENST00000438571 LINC00477Q96M19 166 aa12.44□□□□□ -0.42
GTF3A-204ENST00000438571 SCRT2Q9NQ03 307 aa12.44□□□□□ -0.42
GTF3A-204ENST00000438571 TNFRSF18Q9Y5U5 241 aa12.44□□□□□ -0.42
GTF3A-204ENST00000438571 FAT1Q14517 4588 aa12.44□□□□□ -0.42
GTF3A-204ENST00000438571 MPDU1O75352 247 aa12.43□□□□□ -0.42
GTF3A-204ENST00000438571 SIX6O95475 246 aa12.43□□□□□ -0.42
GTF3A-204ENST00000438571 GPX1P07203 203 aa12.43□□□□□ -0.42
GTF3A-204ENST00000438571 PHYHIPLQ96FC7 376 aa12.43□□□□□ -0.42
GTF3A-204ENST00000438571 OR10J4P0C629 311 aa12.42□□□□□ -0.42
GTF3A-204ENST00000438571 ATP6V1FQ16864 119 aa12.42□□□□□ -0.42
GTF3A-204ENST00000438571 OR5C1Q8NGR4 320 aa12.42□□□□□ -0.42
GTF3A-204ENST00000438571 AAMDCQ9H7C9 122 aa12.42□□□□□ -0.42
GTF3A-204ENST00000438571 OR5AC2Q9NZP5 309 aa12.42□□□□□ -0.42
GTF3A-204ENST00000438571 ZNF492Q9P255 531 aa12.42□□□□□ -0.42
GTF3A-204ENST00000438571 IGHV1OR15-1A0A075B7D0 117 aa12.41□□□□□ -0.42
GTF3A-204ENST00000438571 RGS13O14921 159 aa12.41□□□□□ -0.42
GTF3A-204ENST00000438571 PAX4O43316 350 aa12.41□□□□□ -0.42
GTF3A-204ENST00000438571 NXPH4O95158 308 aa12.41□□□□□ -0.42
GTF3A-204ENST00000438571 IBA57Q5T440 356 aaKnown RBP12.41□□□□□ -0.42
GTF3A-204ENST00000438571 FXYD5Q96DB9 178 aa12.41□□□□□ -0.42
GTF3A-204ENST00000438571 ST6GAL2Q96JF0 529 aa12.41□□□□□ -0.42
GTF3A-204ENST00000438571 FAM240BA0A1B0GVZ2 78 aa12.4□□□□□ -0.42
GTF3A-204ENST00000438571 H0YIZ8 118 aa12.4□□□□□ -0.42
GTF3A-204ENST00000438571 SIVA1O15304 175 aa12.4□□□□□ -0.42
GTF3A-204ENST00000438571 TMEM78Q5T7P6 136 aa12.4□□□□□ -0.42
GTF3A-204ENST00000438571 LINC00299Q6ZSB3 139 aa12.4□□□□□ -0.42
GTF3A-204ENST00000438571 OR51M1Q9H341 326 aa12.4□□□□□ -0.42
GTF3A-204ENST00000438571 ICOSQ9Y6W8 199 aa12.4□□□□□ -0.42
GTF3A-204ENST00000438571 NBEAP1P0C6P0 100 aa12.39□□□□□ -0.43
GTF3A-204ENST00000438571 CRYBA4P53673 196 aa12.39□□□□□ -0.43
GTF3A-204ENST00000438571 FHL2Q14192 279 aa12.39□□□□□ -0.43
GTF3A-204ENST00000438571 LRRC37A5PQ49AS3 106 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms