RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 SCO2A0A1W2PP80 73 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 A0A1W2PPV4 95 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 RNF222A6NCQ9 220 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 STAG3L2P0CL84 134 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 STAG3L3P0CL85 134 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 CSN1S1P47710 185 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 FAM3BP58499 235 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-203ENST00000428014 DEFB1P60022 68 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 DAZ2Q13117 558 aaKnown RBP6.52□□□□□ -1.37
SMC1A-203ENST00000428014 ANXA2RQ3ZCQ2 193 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 ZFP69Q49AA0 526 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 GCSAMLQ5JQS6 135 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 IBA57Q5T440 356 aaKnown RBP6.52□□□□□ -1.37
SMC1A-203ENST00000428014 Q6ZTC4 211 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 MIR17HGQ75NE6 70 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 RPP25LQ8N5L8 163 aaKnown RBP6.52□□□□□ -1.37
SMC1A-203ENST00000428014 ZNF680Q8NEM1 530 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 RNASE8Q8TDE3 154 aaKnown RBP6.52□□□□□ -1.37
SMC1A-203ENST00000428014 ZNF503Q96F45 646 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 NKX6-2Q9C056 277 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-203ENST00000428014 OTORQ9NRC9 128 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 APLNQ9ULZ1 77 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 TIMM8BQ9Y5J9 83 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-203ENST00000428014 DNAH1Q9P2D7 4330 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 DEFB131BA0A096LNP1 70 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 PLAC8L1A1L4L8 177 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 H3BNG1 76 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 M0R2Z0 102 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 OR7C2O60412 319 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 IGKV3-20P01619 116 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 PYYP10082 97 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 UBE2L3P68036 154 aaKnown RBP6.51□□□□□ -1.37
SMC1A-203ENST00000428014 PMS2P11Q13670 270 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 Q5BKY6 102 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 TMEM78Q5T7P6 136 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 FAM222AQ5U5X8 452 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 IGFL4Q6B9Z1 124 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 C15orf53Q8NAA6 179 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 TCEAL7Q9BRU2 100 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 NDUFAF3Q9BU61 184 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 WFDC1Q9HC57 220 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 TMEM167BQ9NRX6 74 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 ZNF492Q9P255 531 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 YTHDF2Q9Y5A9 579 aaKnown RBP6.51□□□□□ -1.37
SMC1A-203ENST00000428014 ARL2-SNX15V9GYD0 113 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 SACSQ9NZJ4 4579 aa6.51□□□□□ -1.37
SMC1A-203ENST00000428014 A0A0D9SG52 128 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 CBY3A6NI87 242 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 PRAC2D3DTV9 90 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 SMLR1H3BR10 107 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 M0R3E3 92 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 ZNF324O75467 553 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-203ENST00000428014 P0DMU3 169 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 FAM231AP0DMU4 169 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 FAM231CP0DMU5 169 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 CT45A10P0DMU9 189 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 ATP6V0CP27449 155 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 ZNF138P52744 262 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 ICAM4Q14773 271 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 RNF212Q495C1 297 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 GFI1BQ5VTD9 330 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 CCDC28AQ8IWP9 274 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 OR11H4Q8NGC9 324 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 OR10G4Q8NGN3 311 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 OR10G9Q8NGN4 311 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 OR10G7Q8NGN6 311 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 LINC01587Q99440 93 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 AGPAT4-IT1Q9H0P7 198 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 CELA1Q9UNI1 258 aa6.5□□□□□ -1.37
SMC1A-203ENST00000428014 RYR3Q15413 4870 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 IGHV4-4A0A075B6R2 117 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 A0A1W2PRE2 83 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 C7orf71A4D174 169 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 H3BS24 57 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 DEFB4AO15263 64 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 ARPC5O15511 151 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 CXorf1O96002 111 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 CDC34P49427 236 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-203ENST00000428014 DAD1P61803 113 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 CD300CQ08708 224 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 LGALS9BQ3B8N2 356 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 TDRG1Q3Y452 100 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 Q6AWC8 147 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 BAP18Q8IXM2 172 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 ZFAND2AQ8N6M9 145 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 Q9H3A6 140 aa6.49□□□□□ -1.37
SMC1A-203ENST00000428014 PLECQ15149 4684 aaKnown RBP6.48□□□□□ -1.37
SMC1A-203ENST00000428014 IGHV3OR16-12A0A075B7B8 117 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 UMAD1C9J7I0 102 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 DIRC3C9JPN6 131 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 ATP5G1P05496 136 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 ATP5G3P48201 142 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 FXYD7P58549 80 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 EIF5AP63241 154 aaKnown RBP6.48□□□□□ -1.37
SMC1A-203ENST00000428014 EXOC3-AS1Q8N2X6 119 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 KCNRGQ8N5I3 272 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 EIF4E3Q8N5X7 224 aaKnown RBP6.48□□□□□ -1.37
SMC1A-203ENST00000428014 C5orf17Q8NAS9 161 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 CMTM2Q8TAZ6 248 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 BLNKQ8WV28 456 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms