RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TM4SF20Q53R12 229 aa16.6■□□□□ 0.25
CNEP1R1-202ENST00000427478 COX8CQ7Z4L0 72 aa16.6■□□□□ 0.25
CNEP1R1-202ENST00000427478 TMEM89A2RUT3 159 aa16.6■□□□□ 0.25
CNEP1R1-202ENST00000427478 SERF1AO75920 110 aa16.6■□□□□ 0.25
CNEP1R1-202ENST00000427478 Q0VG73 95 aa16.6■□□□□ 0.25
CNEP1R1-202ENST00000427478 NDFIP1Q9BT67 221 aa16.6■□□□□ 0.25
CNEP1R1-202ENST00000427478 A0A1W2PS18 150 aa16.59■□□□□ 0.25
CNEP1R1-202ENST00000427478 RBAKDNA6NC62 111 aa16.59■□□□□ 0.25
CNEP1R1-202ENST00000427478 ZNF80P51504 273 aaPredicted RBP16.59■□□□□ 0.25
CNEP1R1-202ENST00000427478 CDPF1Q6NVV7 123 aa16.58■□□□□ 0.25
CNEP1R1-202ENST00000427478 MRPL53Q96EL3 112 aaKnown RBP16.58■□□□□ 0.25
CNEP1R1-202ENST00000427478 TMSB15BA0A087X1C1 80 aa16.58■□□□□ 0.24
CNEP1R1-202ENST00000427478 IGHV7-4-1A0A0J9YVY3 117 aa16.58■□□□□ 0.24
CNEP1R1-202ENST00000427478 GPHB5Q86YW7 130 aa16.58■□□□□ 0.24
CNEP1R1-202ENST00000427478 DAZ1Q9NQZ3 744 aaKnown RBP16.58■□□□□ 0.24
CNEP1R1-202ENST00000427478 ITPR3Q14573 2671 aa16.58■□□□□ 0.24
CNEP1R1-202ENST00000427478 MXRA5Q9NR99 2828 aa16.57■□□□□ 0.24
CNEP1R1-202ENST00000427478 FOXA3P55318 350 aaPredicted RBP16.57■□□□□ 0.24
CNEP1R1-202ENST00000427478 RHPN1-AS1Q9BWJ2 59 aa16.57■□□□□ 0.24
CNEP1R1-202ENST00000427478 SELENOKQ9Y6D0 94 aa16.57■□□□□ 0.24
CNEP1R1-202ENST00000427478 TMEM189A5PLL7 270 aa16.57■□□□□ 0.24
CNEP1R1-202ENST00000427478 EDN2P20800 178 aa16.57■□□□□ 0.24
CNEP1R1-202ENST00000427478 RPL11P62913 178 aaKnown RBP16.57■□□□□ 0.24
CNEP1R1-202ENST00000427478 TPPP3Q9BW30 176 aa16.57■□□□□ 0.24
CNEP1R1-202ENST00000427478 A8MWP6 167 aa16.56■□□□□ 0.24
CNEP1R1-202ENST00000427478 FAM106AQ4KMX7 169 aa16.56■□□□□ 0.24
CNEP1R1-202ENST00000427478 OR10J3Q5JRS4 329 aa16.56■□□□□ 0.24
CNEP1R1-202ENST00000427478 C20orf173Q96LM9 149 aa16.56■□□□□ 0.24
CNEP1R1-202ENST00000427478 AGPAT4-IT1Q9H0P7 198 aa16.56■□□□□ 0.24
CNEP1R1-202ENST00000427478 FOXE3Q13461 319 aa16.55■□□□□ 0.24
CNEP1R1-202ENST00000427478 IGKV3-7A0A075B6H7 116 aa16.55■□□□□ 0.24
CNEP1R1-202ENST00000427478 ARMS2P0C7Q2 107 aa16.55■□□□□ 0.24
CNEP1R1-202ENST00000427478 HAX1O00165 279 aa16.54■□□□□ 0.24
CNEP1R1-202ENST00000427478 ELANEP08246 267 aa16.54■□□□□ 0.24
CNEP1R1-202ENST00000427478 BMI1P35226 326 aa16.54■□□□□ 0.24
CNEP1R1-202ENST00000427478 TMEM78Q5T7P6 136 aa16.54■□□□□ 0.24
CNEP1R1-202ENST00000427478 ZNF738Q8NE65 137 aa16.54■□□□□ 0.24
CNEP1R1-202ENST00000427478 CLEC5AQ9NY25 188 aa16.54■□□□□ 0.24
CNEP1R1-202ENST00000427478 A0A1B0GUT8 65 aa16.54■□□□□ 0.24
CNEP1R1-202ENST00000427478 SOCS3O14543 225 aa16.54■□□□□ 0.24
CNEP1R1-202ENST00000427478 ESDP10768 282 aa16.54■□□□□ 0.24
CNEP1R1-202ENST00000427478 RCHY1Q96PM5 261 aa16.54■□□□□ 0.24
CNEP1R1-202ENST00000427478 SMPXQ9UHP9 88 aa16.54■□□□□ 0.24
CNEP1R1-202ENST00000427478 PDZD2O15018 2839 aa16.53■□□□□ 0.24
CNEP1R1-202ENST00000427478 K7EMT4 169 aa16.53■□□□□ 0.24
CNEP1R1-202ENST00000427478 IQCJQ1A5X6 159 aa16.53■□□□□ 0.24
CNEP1R1-202ENST00000427478 Q6AWC8 147 aa16.53■□□□□ 0.24
CNEP1R1-202ENST00000427478 NRN1Q9NPD7 142 aa16.53■□□□□ 0.24
CNEP1R1-202ENST00000427478 ZNF138P52744 262 aa16.52■□□□□ 0.24
CNEP1R1-202ENST00000427478 C18orf32Q8TCD1 76 aa16.52■□□□□ 0.24
CNEP1R1-202ENST00000427478 MYOZ3Q8TDC0 251 aa16.52■□□□□ 0.24
CNEP1R1-202ENST00000427478 LGALS1P09382 135 aaKnown RBP16.52■□□□□ 0.23
CNEP1R1-202ENST00000427478 ZNF705DP0CH99 300 aaPredicted RBP16.52■□□□□ 0.23
CNEP1R1-202ENST00000427478 ZNF705BP0CI00 300 aaPredicted RBP16.52■□□□□ 0.23
CNEP1R1-202ENST00000427478 C9orf47Q6ZRZ4 202 aa16.52■□□□□ 0.23
CNEP1R1-202ENST00000427478 TEX29Q8N6K0 151 aa16.52■□□□□ 0.23
CNEP1R1-202ENST00000427478 FAM181BA6NEQ2 426 aa16.51■□□□□ 0.23
CNEP1R1-202ENST00000427478 RIGQ13278 110 aa16.51■□□□□ 0.23
CNEP1R1-202ENST00000427478 JOSD1Q15040 202 aaPredicted RBP16.51■□□□□ 0.23
CNEP1R1-202ENST00000427478 ALKBH7Q9BT30 221 aaPredicted RBP16.51■□□□□ 0.23
CNEP1R1-202ENST00000427478 UFC1Q9Y3C8 167 aa16.51■□□□□ 0.23
CNEP1R1-202ENST00000427478 FABP5P3A8MUU1 101 aa16.51■□□□□ 0.23
CNEP1R1-202ENST00000427478 Q8N2B8 174 aa16.51■□□□□ 0.23
CNEP1R1-202ENST00000427478 BORCS7Q96B45 105 aa16.51■□□□□ 0.23
CNEP1R1-202ENST00000427478 ORM1P02763 201 aa16.5■□□□□ 0.23
CNEP1R1-202ENST00000427478 SRD5A1P18405 259 aa16.5■□□□□ 0.23
CNEP1R1-202ENST00000427478 LYZL1Q6UWQ5 148 aa16.5■□□□□ 0.23
CNEP1R1-202ENST00000427478 FOXC2Q99958 501 aa16.5■□□□□ 0.23
CNEP1R1-202ENST00000427478 KCNS1Q96KK3 526 aa16.49■□□□□ 0.23
CNEP1R1-202ENST00000427478 SAMD10Q9BYL1 202 aa16.49■□□□□ 0.23
CNEP1R1-202ENST00000427478 IGHV4OR15-8A0A075B7B6 117 aa16.49■□□□□ 0.23
CNEP1R1-202ENST00000427478 A0A087WW49 117 aa16.49■□□□□ 0.23
CNEP1R1-202ENST00000427478 RPS20P60866 119 aaKnown RBP16.49■□□□□ 0.23
CNEP1R1-202ENST00000427478 SSTP61278 116 aa16.49■□□□□ 0.23
CNEP1R1-202ENST00000427478 PAFAH1B2P68402 229 aa16.49■□□□□ 0.23
CNEP1R1-202ENST00000427478 UBE2E2Q96LR5 201 aa16.49■□□□□ 0.23
CNEP1R1-202ENST00000427478 GSN-AS1Q9NRJ2 163 aa16.49■□□□□ 0.23
CNEP1R1-202ENST00000427478 HELZ2Q9BYK8 2649 aaKnown RBP16.49■□□□□ 0.23
CNEP1R1-202ENST00000427478 TMEM213A2RRL7 107 aa16.48■□□□□ 0.23
CNEP1R1-202ENST00000427478 DEFB1P60022 68 aa16.48■□□□□ 0.23
CNEP1R1-202ENST00000427478 KRTAP1-1Q07627 177 aa16.48■□□□□ 0.23
CNEP1R1-202ENST00000427478 RNF152Q8N8N0 203 aa16.48■□□□□ 0.23
CNEP1R1-202ENST00000427478 KLF5Q13887 457 aaPredicted RBP16.48■□□□□ 0.23
CNEP1R1-202ENST00000427478 TMEM86BQ8N661 226 aa16.47■□□□□ 0.23
CNEP1R1-202ENST00000427478 LOC102724200A0A096LPH7 203 aaPredicted RBP16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 MUC21A0A0G2JKD1 596 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 MUC21A0A140T8X8 626 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 SYNJ2BPP57105 145 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 SRSF2Q01130 221 aaKnown RBP16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 MUC21Q5SSG8 566 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 ZNF575Q86XF7 245 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 FLNAP21333 2647 aaKnown RBP16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 CCDC168Q8NDH2 2452 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 A0A1B0GW15 77 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 DNAJC9-AS1A6NH13 148 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 OVOL1O14753 267 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 KLHDC1Q8N7A1 406 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 FER1L6-AS1Q8NA97 138 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 OR10J6PQ8NGY7 276 aa16.46■□□□□ 0.23
CNEP1R1-202ENST00000427478 PMCHP20382 165 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms