RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 ZC2HC1AQ96GY0 325 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 PRR25Q96S07 402 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 C12orf57Q99622 126 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 NDFIP1Q9BT67 221 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 IGHV3OR16-13A0A075B7E8 117 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 IGHV3-74A0A0B4J1X5 117 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 IFITM10A6NMD0 228 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 A8MWP6 167 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 TRBV12-3P01733 135 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 APCSP02743 223 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 Q0VG73 95 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 OXLD1Q5BKU9 147 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 FAM162BQ5T6X4 162 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 GFI1BQ5VTD9 330 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 Q6AWC8 147 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 MRPL54Q6P161 138 aaKnown RBP4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 UNQ9165/PRO28630Q6UXU0 137 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 C8orf86Q6ZUL3 223 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 Q8N2B8 174 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 C16orf92Q96LL3 132 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 DAZ1Q9NQZ3 744 aaKnown RBP4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 UFC1Q9Y3C8 167 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 HECTD1Q9ULT8 2610 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 VPS13CQ709C8 3753 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 PRRC2AP48634 2157 aaKnown RBP4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 APCP25054 2843 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 IGKV2-40A0A087WW87 121 aaPredicted RBP4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 IGHV3-49A0A0A0MS15 119 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 IGHV7-4-1A0A0J9YVY3 117 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 A0A1B0GW15 77 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 TMEM189A5PLL7 270 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 FABP5P3A8MUU1 101 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 ZNF705FA8MVS1 300 aaPredicted RBP4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 IGKV2D-40P01614 121 aaPredicted RBP4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 FRMD6-AS1P0C7T7 363 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 FABP4P15090 132 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 CRIP1P50238 77 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 RPS20P60866 119 aaKnown RBP4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 HBBP68871 147 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 SAMD13Q5VXD3 122 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 IGFL4Q6B9Z1 124 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 LCNL1Q6ZST4 164 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 TCF24Q7RTU0 167 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 SIGLECL1Q8N7X8 197 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 RNF152Q8N8N0 203 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 OR10D4PQ8NGN7 298 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 GTSF1Q8WW33 167 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 TMEM18Q96B42 140 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 UBE2E2Q96LR5 201 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 HIST1H2BLQ99880 126 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 VGLL1Q99990 258 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 RHPN1-AS1Q9BWJ2 59 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 ZNF702PQ9H963 129 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 SMPXQ9UHP9 88 aa4.79□□□□□ -1.64
GTF3C3-202ENST00000409364 TRAV8-2A0A0B4J237 113 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 A0A1B0GUT8 65 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 A0A1B0GXF2 115 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 OVOL1O14753 267 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 HLA-DMBP28068 263 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 CAMPP49913 170 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 SRSF2Q01130 221 aaKnown RBP4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 RIGQ13278 110 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 SCGB2A2Q13296 93 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 PDZD11Q5EBL8 140 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 OR10J3Q5JRS4 329 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 TMEM78Q5T7P6 136 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 C9orf47Q6ZRZ4 202 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 BAGE3Q86Y29 109 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 MYOZ3Q8TDC0 251 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 PGLYRP4Q96LB8 373 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 LINC00477Q96M19 166 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 PACRGQ96M98 296 aaPredicted RBP4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 C8orf49Q96NF6 230 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 ASCL2Q99929 193 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 NRN1Q9NPD7 142 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 LENEPQ9Y5L5 61 aa4.78□□□□□ -1.64
GTF3C3-202ENST00000409364 PRAC2D3DTV9 90 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 LGALS9O00182 355 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 CD5LO43866 347 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 AMBPP02760 352 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 RPLP1P05386 114 aaKnown RBP4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 LGALS1P09382 135 aaKnown RBP4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 ESDP10768 282 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 ZNF138P52744 262 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 RPL11P62913 178 aaKnown RBP4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 PAFAH1B2P68402 229 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 DNLZQ5SXM8 178 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 RNF182Q8N6D2 247 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 BORCS7Q96B45 105 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 AGPAT4-IT1Q9H0P7 198 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 CELSR1Q9NYQ6 3014 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 SH2D1AO60880 128 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 ID1P41134 155 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 HIST1H1AQ02539 215 aaPredicted RBP4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 ERCC8Q13216 396 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 KIAA1644Q3SXP7 199 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 C10orf99Q6UWK7 81 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 TMEM256Q8N2U0 113 aa4.77□□□□□ -1.65
GTF3C3-202ENST00000409364 ZNF738Q8NE65 137 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms