RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 IGKV2D-40P01614 121 aaPredicted RBP15.86■□□□□ 0.13
TPM1-208ENST00000404484 OR5I1Q13606 314 aa15.86■□□□□ 0.13
TPM1-208ENST00000404484 NHLRC2Q8NBF2 726 aa15.86■□□□□ 0.13
TPM1-208ENST00000404484 IMMP2LQ96T52 175 aa15.86■□□□□ 0.13
TPM1-208ENST00000404484 SAPCD1Q5SSQ6 148 aa15.85■□□□□ 0.13
TPM1-208ENST00000404484 IBA57Q5T440 356 aaKnown RBP15.85■□□□□ 0.13
TPM1-208ENST00000404484 FAM231DQ6ZW35 169 aa15.85■□□□□ 0.13
TPM1-208ENST00000404484 NDUFA11Q86Y39 141 aa15.85■□□□□ 0.13
TPM1-208ENST00000404484 NDFIP1Q9BT67 221 aa15.85■□□□□ 0.13
TPM1-208ENST00000404484 ZNF705FA8MVS1 300 aaPredicted RBP15.84■□□□□ 0.13
TPM1-208ENST00000404484 PAFAH1B2P68402 229 aa15.84■□□□□ 0.13
TPM1-208ENST00000404484 KCNIP4Q6PIL6 250 aa15.84■□□□□ 0.13
TPM1-208ENST00000404484 ZNF738Q8NE65 137 aa15.84■□□□□ 0.13
TPM1-208ENST00000404484 ZNF492Q9P255 531 aa15.84■□□□□ 0.13
TPM1-208ENST00000404484 CMYA5Q8N3K9 4069 aa15.84■□□□□ 0.13
TPM1-208ENST00000404484 IGKV3-7A0A075B6H7 116 aa15.83■□□□□ 0.13
TPM1-208ENST00000404484 OVOL1O14753 267 aa15.83■□□□□ 0.13
TPM1-208ENST00000404484 MS4A6AQ9H2W1 248 aa15.83■□□□□ 0.13
TPM1-208ENST00000404484 COLCA2A8K830 154 aa15.83■□□□□ 0.12
TPM1-208ENST00000404484 FAM24BQ8N5W8 94 aa15.83■□□□□ 0.12
TPM1-208ENST00000404484 DYNLRB2Q8TF09 96 aa15.83■□□□□ 0.12
TPM1-208ENST00000404484 DCANP1Q8TF63 244 aa15.83■□□□□ 0.12
TPM1-208ENST00000404484 CSN3P07498 182 aa15.82■□□□□ 0.12
TPM1-208ENST00000404484 CT45A10P0DMU9 189 aa15.82■□□□□ 0.12
TPM1-208ENST00000404484 ELOBQ15370 118 aa15.82■□□□□ 0.12
TPM1-208ENST00000404484 TMEM78Q5T7P6 136 aa15.82■□□□□ 0.12
TPM1-208ENST00000404484 PRR27Q6MZM9 219 aa15.82■□□□□ 0.12
TPM1-208ENST00000404484 GBGT1Q8N5D6 347 aa15.82■□□□□ 0.12
TPM1-208ENST00000404484 BTF3L4Q96K17 158 aa15.82■□□□□ 0.12
TPM1-208ENST00000404484 YPEL4Q96NS1 127 aa15.82■□□□□ 0.12
TPM1-208ENST00000404484 URGCP-MRPS24S4R325 110 aa15.82■□□□□ 0.12
TPM1-208ENST00000404484 PRAC2D3DTV9 90 aa15.81■□□□□ 0.12
TPM1-208ENST00000404484 SNRPD3P62318 126 aaKnown RBP15.81■□□□□ 0.12
TPM1-208ENST00000404484 ADAMTSL5Q6ZMM2 481 aa15.81■□□□□ 0.12
TPM1-208ENST00000404484 DAZAP1Q96EP5 407 aaKnown RBP15.81■□□□□ 0.12
TPM1-208ENST00000404484 VGLL1Q99990 258 aa15.81■□□□□ 0.12
TPM1-208ENST00000404484 RNASE7Q9H1E1 156 aaKnown RBP15.81■□□□□ 0.12
TPM1-208ENST00000404484 TRAV2A0A0B4J234 112 aa15.8■□□□□ 0.12
TPM1-208ENST00000404484 ADARB2-AS1A8MUL3 147 aa15.8■□□□□ 0.12
TPM1-208ENST00000404484 GATCO43716 136 aaKnown RBP15.8■□□□□ 0.12
TPM1-208ENST00000404484 NSUN5P1Q3KNT7 163 aa15.8■□□□□ 0.12
TPM1-208ENST00000404484 C9orf47Q6ZRZ4 202 aa15.8■□□□□ 0.12
TPM1-208ENST00000404484 COX8CQ7Z4L0 72 aa15.8■□□□□ 0.12
TPM1-208ENST00000404484 OR10J6PQ8NGY7 276 aa15.8■□□□□ 0.12
TPM1-208ENST00000404484 C20orf173Q96LM9 149 aa15.8■□□□□ 0.12
TPM1-208ENST00000404484 PRR25Q96S07 402 aa15.8■□□□□ 0.12
TPM1-208ENST00000404484 SIGLEC8Q9NYZ4 499 aa15.8■□□□□ 0.12
TPM1-208ENST00000404484 IL36BQ9NZH7 164 aa15.8■□□□□ 0.12
TPM1-208ENST00000404484 V9GYV3 84 aa15.8■□□□□ 0.12
TPM1-208ENST00000404484 ZNF705GA8MUZ8 300 aaPredicted RBP15.79■□□□□ 0.12
TPM1-208ENST00000404484 K7EQG2 157 aa15.79■□□□□ 0.12
TPM1-208ENST00000404484 PFN1P07737 140 aaKnown RBP15.79■□□□□ 0.12
TPM1-208ENST00000404484 RBPMS2Q6ZRY4 209 aaKnown RBP15.79■□□□□ 0.12
TPM1-208ENST00000404484 PPP1R14DQ9NXH3 145 aa15.79■□□□□ 0.12
TPM1-208ENST00000404484 TRBV24-1A0A075B6N3 115 aa15.79■□□□□ 0.12
TPM1-208ENST00000404484 ZNF138P52744 262 aa15.79■□□□□ 0.12
TPM1-208ENST00000404484 WFDC3Q8IUB2 231 aa15.79■□□□□ 0.12
TPM1-208ENST00000404484 NUDT10Q8NFP7 164 aa15.79■□□□□ 0.12
TPM1-208ENST00000404484 NUDT11Q96G61 164 aa15.79■□□□□ 0.12
TPM1-208ENST00000404484 TRAV9-1A0A075B6T8 112 aa15.78■□□□□ 0.12
TPM1-208ENST00000404484 P01737 135 aa15.78■□□□□ 0.12
TPM1-208ENST00000404484 ZC2HC1AQ96GY0 325 aa15.78■□□□□ 0.12
TPM1-208ENST00000404484 LENEPQ9Y5L5 61 aa15.78■□□□□ 0.12
TPM1-208ENST00000404484 C19orf71A6NCJ1 209 aa15.77■□□□□ 0.11
TPM1-208ENST00000404484 CT83Q5H943 113 aa15.77■□□□□ 0.11
TPM1-208ENST00000404484 OR4B1Q8NGF8 309 aa15.77■□□□□ 0.11
TPM1-208ENST00000404484 LINC00477Q96M19 166 aa15.77■□□□□ 0.11
TPM1-208ENST00000404484 AGPAT4-IT1Q9H0P7 198 aa15.77■□□□□ 0.11
TPM1-208ENST00000404484 SELENOKQ9Y6D0 94 aa15.77■□□□□ 0.11
TPM1-208ENST00000404484 TRAV25A0A0B4J276 109 aa15.76■□□□□ 0.11
TPM1-208ENST00000404484 NPIPB6E9PJ23 425 aa15.76■□□□□ 0.11
TPM1-208ENST00000404484 PRB4P10163 310 aaPredicted RBP15.76■□□□□ 0.11
TPM1-208ENST00000404484 RAB5AP20339 215 aa15.76■□□□□ 0.11
TPM1-208ENST00000404484 TFPI2P48307 235 aa15.76■□□□□ 0.11
TPM1-208ENST00000404484 ERCC8Q13216 396 aa15.76■□□□□ 0.11
TPM1-208ENST00000404484 SMUG1Q53HV7 270 aa15.76■□□□□ 0.11
TPM1-208ENST00000404484 Q8TAT8 98 aa15.76■□□□□ 0.11
TPM1-208ENST00000404484 RPP21Q9H633 154 aaKnown RBP15.76■□□□□ 0.11
TPM1-208ENST00000404484 NOTCH3Q9UM47 2321 aa15.76■□□□□ 0.11
TPM1-208ENST00000404484 RPL19P84098 196 aaKnown RBP15.75■□□□□ 0.11
TPM1-208ENST00000404484 DEFB114Q30KQ6 69 aa15.75■□□□□ 0.11
TPM1-208ENST00000404484 OR8A1Q8NGG7 326 aa15.75■□□□□ 0.11
TPM1-208ENST00000404484 FAM210BQ96KR6 192 aa15.75■□□□□ 0.11
TPM1-208ENST00000404484 TGIF2-C20orf24A0A0A6YYL0 155 aa15.75■□□□□ 0.11
TPM1-208ENST00000404484 A0A1W2PPQ1 181 aa15.75■□□□□ 0.11
TPM1-208ENST00000404484 FAM162BQ5T6X4 162 aa15.75■□□□□ 0.11
TPM1-208ENST00000404484 C8orf49Q96NF6 230 aa15.75■□□□□ 0.11
TPM1-208ENST00000404484 PYGO2Q9BRQ0 406 aa15.75■□□□□ 0.11
TPM1-208ENST00000404484 TRBV7-9A0A0J9YWB2 115 aa15.73■□□□□ 0.11
TPM1-208ENST00000404484 A8MWL6 223 aa15.73■□□□□ 0.11
TPM1-208ENST00000404484 PF4P02776 101 aa15.73■□□□□ 0.11
TPM1-208ENST00000404484 CXCL1P09341 107 aa15.73■□□□□ 0.11
TPM1-208ENST00000404484 ZNF688P0C7X2 276 aa15.73■□□□□ 0.11
TPM1-208ENST00000404484 HIST1H1AQ02539 215 aaPredicted RBP15.73■□□□□ 0.11
TPM1-208ENST00000404484 PSMG4Q5JS54 123 aa15.73■□□□□ 0.11
TPM1-208ENST00000404484 LINC00322Q6ZN03 302 aaPredicted RBP15.73■□□□□ 0.11
TPM1-208ENST00000404484 TMEM61Q8N0U2 210 aa15.73■□□□□ 0.11
TPM1-208ENST00000404484 SPAG8Q99932 426 aaPredicted RBP15.73■□□□□ 0.11
TPM1-208ENST00000404484 GPR61Q9BZJ8 451 aa15.73■□□□□ 0.11
TPM1-208ENST00000404484 OR4C46A6NHA9 309 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 972.9 ms