RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 DKK2Q9UBU2 259 aa13.74□□□□□ -0.21
RTN4-207ENST00000402434 LCE6AA0A183 80 aa13.74□□□□□ -0.21
RTN4-207ENST00000402434 RBAKDNA6NC62 111 aa13.74□□□□□ -0.21
RTN4-207ENST00000402434 SLC25A5P05141 298 aaKnown RBP13.74□□□□□ -0.21
RTN4-207ENST00000402434 NMBP08949 121 aa13.74□□□□□ -0.21
RTN4-207ENST00000402434 Q6ZTC4 211 aa13.74□□□□□ -0.21
RTN4-207ENST00000402434 ARL6IP6Q8N6S5 226 aa13.74□□□□□ -0.21
RTN4-207ENST00000402434 RXFP4Q8TDU9 374 aa13.74□□□□□ -0.21
RTN4-207ENST00000402434 OTORQ9NRC9 128 aa13.74□□□□□ -0.21
RTN4-207ENST00000402434 PGPA6NDG6 321 aa13.73□□□□□ -0.21
RTN4-207ENST00000402434 KLLNB2CW77 178 aa13.73□□□□□ -0.21
RTN4-207ENST00000402434 H7BYZ3 331 aa13.73□□□□□ -0.21
RTN4-207ENST00000402434 CRISP2P16562 243 aa13.73□□□□□ -0.21
RTN4-207ENST00000402434 AZU1P20160 251 aa13.73□□□□□ -0.21
RTN4-207ENST00000402434 GCHFRP30047 84 aa13.73□□□□□ -0.21
RTN4-207ENST00000402434 TMEM78Q5T7P6 136 aa13.73□□□□□ -0.21
RTN4-207ENST00000402434 YTHDF2Q9Y5A9 579 aaKnown RBP13.73□□□□□ -0.21
RTN4-207ENST00000402434 TRBV7-9A0A0J9YWB2 115 aa13.72□□□□□ -0.21
RTN4-207ENST00000402434 TEX48A0A1B0GUV7 120 aa13.72□□□□□ -0.21
RTN4-207ENST00000402434 DIRC3C9JPN6 131 aa13.72□□□□□ -0.21
RTN4-207ENST00000402434 CXorf1O96002 111 aa13.72□□□□□ -0.21
RTN4-207ENST00000402434 ZNF726P1Q15940 193 aa13.72□□□□□ -0.21
RTN4-207ENST00000402434 FAM74A1Q5RGS3 127 aa13.72□□□□□ -0.21
RTN4-207ENST00000402434 FAM222AQ5U5X8 452 aa13.72□□□□□ -0.21
RTN4-207ENST00000402434 SSX7Q7RTT5 188 aa13.72□□□□□ -0.21
RTN4-207ENST00000402434 TCTE3Q8IZS6 198 aa13.72□□□□□ -0.21
RTN4-207ENST00000402434 ZNF492Q9P255 531 aa13.72□□□□□ -0.21
RTN4-207ENST00000402434 PLAC8L1A1L4L8 177 aa13.71□□□□□ -0.21
RTN4-207ENST00000402434 ZNF138P52744 262 aa13.71□□□□□ -0.21
RTN4-207ENST00000402434 HYLS1Q96M11 299 aa13.71□□□□□ -0.21
RTN4-207ENST00000402434 TRAV10A0A0B4J240 114 aa13.7□□□□□ -0.22
RTN4-207ENST00000402434 CTXND1A0A1B0GTU2 59 aa13.7□□□□□ -0.22
RTN4-207ENST00000402434 AKR1C8PQ5T2L2 129 aa13.7□□□□□ -0.22
RTN4-207ENST00000402434 ZFAND2AQ8N6M9 145 aa13.7□□□□□ -0.22
RTN4-207ENST00000402434 TMEM167BQ9NRX6 74 aa13.7□□□□□ -0.22
RTN4-207ENST00000402434 LYSTQ99698 3801 aa13.7□□□□□ -0.22
RTN4-207ENST00000402434 TRAV12-3A0A0B4J271 114 aa13.69□□□□□ -0.22
RTN4-207ENST00000402434 J3KRW8 73 aa13.69□□□□□ -0.22
RTN4-207ENST00000402434 BCL2L11O43521 198 aa13.69□□□□□ -0.22
RTN4-207ENST00000402434 ZNF493Q6ZR52 646 aa13.69□□□□□ -0.22
RTN4-207ENST00000402434 ZNF767PQ75MW2 155 aa13.69□□□□□ -0.22
RTN4-207ENST00000402434 CMTM2Q8TAZ6 248 aa13.69□□□□□ -0.22
RTN4-207ENST00000402434 C2CD4CQ8TF44 421 aa13.69□□□□□ -0.22
RTN4-207ENST00000402434 NIPSNAP3BQ9BS92 247 aa13.69□□□□□ -0.22
RTN4-207ENST00000402434 KANTRA0A1W2PQU2 76 aa13.68□□□□□ -0.22
RTN4-207ENST00000402434 C7orf71A4D174 169 aa13.68□□□□□ -0.22
RTN4-207ENST00000402434 ZNF324O75467 553 aaPredicted RBP13.68□□□□□ -0.22
RTN4-207ENST00000402434 GPX1P07203 203 aa13.68□□□□□ -0.22
RTN4-207ENST00000402434 SEC11BP0C7V7 166 aa13.68□□□□□ -0.22
RTN4-207ENST00000402434 HTN1P15515 57 aa13.68□□□□□ -0.22
RTN4-207ENST00000402434 CD300CQ08708 224 aa13.68□□□□□ -0.22
RTN4-207ENST00000402434 RNASE8Q8TDE3 154 aaKnown RBP13.68□□□□□ -0.22
RTN4-207ENST00000402434 TMEM263Q8WUH6 116 aaKnown RBP13.68□□□□□ -0.22
RTN4-207ENST00000402434 TMED6Q8WW62 240 aa13.68□□□□□ -0.22
RTN4-207ENST00000402434 C16orf74Q96GX8 76 aa13.68□□□□□ -0.22
RTN4-207ENST00000402434 PYGO2Q9BRQ0 406 aa13.68□□□□□ -0.22
RTN4-207ENST00000402434 LENEPQ9Y5L5 61 aa13.68□□□□□ -0.22
RTN4-207ENST00000402434 LYRM9A8MSI8 78 aa13.67□□□□□ -0.22
RTN4-207ENST00000402434 TMUB2Q71RG4 321 aa13.67□□□□□ -0.22
RTN4-207ENST00000402434 Q8TAT8 98 aa13.67□□□□□ -0.22
RTN4-207ENST00000402434 ZNF471Q9BX82 626 aaPredicted RBP13.67□□□□□ -0.22
RTN4-207ENST00000402434 PLA2G2EQ9NZK7 142 aa13.67□□□□□ -0.22
RTN4-207ENST00000402434 RNASE4P34096 147 aaKnown RBP13.67□□□□□ -0.22
RTN4-207ENST00000402434 TCTAP57738 103 aa13.67□□□□□ -0.22
RTN4-207ENST00000402434 LINC00467Q9BRT7 94 aa13.67□□□□□ -0.22
RTN4-207ENST00000402434 DYNC2H1Q8NCM8 4307 aaKnown RBP13.66□□□□□ -0.22
RTN4-207ENST00000402434 DEFB131BA0A096LNP1 70 aa13.66□□□□□ -0.22
RTN4-207ENST00000402434 BTN1A1Q13410 526 aa13.66□□□□□ -0.22
RTN4-207ENST00000402434 PRR9Q5T870 116 aa13.66□□□□□ -0.22
RTN4-207ENST00000402434 GOLT1AQ6ZVE7 132 aa13.66□□□□□ -0.22
RTN4-207ENST00000402434 C5orf17Q8NAS9 161 aa13.66□□□□□ -0.22
RTN4-207ENST00000402434 TIMM8BQ9Y5J9 83 aaPredicted RBP13.66□□□□□ -0.22
RTN4-207ENST00000402434 A0A1W2PRE2 83 aa13.65□□□□□ -0.22
RTN4-207ENST00000402434 GGTLC3B5MD39 225 aa13.65□□□□□ -0.22
RTN4-207ENST00000402434 C1QBP02746 253 aa13.65□□□□□ -0.22
RTN4-207ENST00000402434 SUMO1P63165 101 aaKnown RBP13.65□□□□□ -0.22
RTN4-207ENST00000402434 EIF5AP63241 154 aaKnown RBP13.65□□□□□ -0.22
RTN4-207ENST00000402434 LGALSLQ3ZCW2 172 aaPredicted RBP13.65□□□□□ -0.22
RTN4-207ENST00000402434 CCDC28AQ8IWP9 274 aa13.65□□□□□ -0.22
RTN4-207ENST00000402434 SERTM2A0A1B0GWG4 89 aa13.64□□□□□ -0.23
RTN4-207ENST00000402434 IGLL5B9A064 214 aa13.64□□□□□ -0.23
RTN4-207ENST00000402434 UMAD1C9J7I0 102 aa13.64□□□□□ -0.23
RTN4-207ENST00000402434 PFDN1O60925 122 aa13.64□□□□□ -0.23
RTN4-207ENST00000402434 FHITP49789 147 aa13.64□□□□□ -0.23
RTN4-207ENST00000402434 DAD1P61803 113 aa13.64□□□□□ -0.23
RTN4-207ENST00000402434 GNG5P63218 68 aa13.64□□□□□ -0.23
RTN4-207ENST00000402434 LINC00476Q8WZB0 136 aa13.64□□□□□ -0.23
RTN4-207ENST00000402434 TMPRSS5Q9H3S3 457 aa13.64□□□□□ -0.23
RTN4-207ENST00000402434 RPH3ALQ9UNE2 315 aa13.64□□□□□ -0.23
RTN4-207ENST00000402434 hCG_2014768A0A024R1R8 64 aa13.63□□□□□ -0.23
RTN4-207ENST00000402434 TCRAP04437 139 aa13.63□□□□□ -0.23
RTN4-207ENST00000402434 FGF8P55075 233 aaPredicted RBP13.63□□□□□ -0.23
RTN4-207ENST00000402434 IQCF2Q8IXL9 164 aa13.63□□□□□ -0.23
RTN4-207ENST00000402434 STOML3Q8TAV4 291 aa13.63□□□□□ -0.23
RTN4-207ENST00000402434 APLNQ9ULZ1 77 aa13.63□□□□□ -0.23
RTN4-207ENST00000402434 MAP1LC3B2A6NCE7 125 aa13.62□□□□□ -0.23
RTN4-207ENST00000402434 TPT1P13693 172 aaKnown RBP13.62□□□□□ -0.23
RTN4-207ENST00000402434 ANXA2RQ3ZCQ2 193 aa13.62□□□□□ -0.23
RTN4-207ENST00000402434 AKAP14Q86UN6 197 aa13.62□□□□□ -0.23
RTN4-207ENST00000402434 MAP1LC3BQ9GZQ8 125 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms