RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 UBE2BP63146 152 aa11.03□□□□□ -0.64
VAPA-202ENST00000400000 GAGE2BQ13066 116 aa11.03□□□□□ -0.64
VAPA-202ENST00000400000 KLF5Q13887 457 aaPredicted RBP11.03□□□□□ -0.64
VAPA-202ENST00000400000 Q86TA4 180 aa11.03□□□□□ -0.64
VAPA-202ENST00000400000 HIST3H2BBQ8N257 126 aa11.03□□□□□ -0.64
VAPA-202ENST00000400000 TINCRA0A1B0GVN0 87 aa11.03□□□□□ -0.64
VAPA-202ENST00000400000 REG4Q9BYZ8 158 aa11.03□□□□□ -0.64
VAPA-202ENST00000400000 RPL18AQ02543 176 aaKnown RBP11.03□□□□□ -0.64
VAPA-202ENST00000400000 RBMY1FQ15415 496 aaKnown RBP11.03□□□□□ -0.64
VAPA-202ENST00000400000 C8orf86Q6ZUL3 223 aa11.03□□□□□ -0.64
VAPA-202ENST00000400000 TRPT1Q86TN4 253 aaKnown RBP11.03□□□□□ -0.64
VAPA-202ENST00000400000 PRSS33Q8NF86 280 aa11.03□□□□□ -0.64
VAPA-202ENST00000400000 CLPSL1A2RUU4 121 aa11.03□□□□□ -0.64
VAPA-202ENST00000400000 NMSQ5H8A3 153 aa11.03□□□□□ -0.64
VAPA-202ENST00000400000 LY6G5BQ8NDX9 201 aa11.03□□□□□ -0.64
VAPA-202ENST00000400000 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.64
VAPA-202ENST00000400000 COX11Q9Y6N1 276 aa11.02□□□□□ -0.64
VAPA-202ENST00000400000 IGHV2-70DA0A0C4DH43 119 aa11.02□□□□□ -0.65
VAPA-202ENST00000400000 ZNF503-AS2A6NEH8 195 aa11.02□□□□□ -0.65
VAPA-202ENST00000400000 WIPF3A6NGB9 483 aa11.02□□□□□ -0.65
VAPA-202ENST00000400000 HAMPP81172 84 aa11.02□□□□□ -0.65
VAPA-202ENST00000400000 CRIPAKQ8N1N5 446 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 ACACAQ13085 2346 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 IGHV4-28A0A0C4DH34 117 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 SYS1-DBNDD2H3BUS1 97 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 IGHV4-59P01825 116 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 HLA-DRB4P13762 266 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 HLA-DRB4X5D2U9 266 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 APOC4P55056 127 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 IGLV10-54A0A075B6I4 117 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 DEFB4AO15263 64 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 SHANK2-AS3Q9BTD1 123 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 MYLKQ15746 1914 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 MMP23AO75900 390 aa11.01□□□□□ -0.65
VAPA-202ENST00000400000 WDR81Q562E7 1941 aa11□□□□□ -0.65
VAPA-202ENST00000400000 NDUFAF3Q9BU61 184 aa11□□□□□ -0.65
VAPA-202ENST00000400000 TMEM75Q8N9X5 138 aa11□□□□□ -0.65
VAPA-202ENST00000400000 VWA8A3KMH1 1905 aa11□□□□□ -0.65
VAPA-202ENST00000400000 FNDC1Q4ZHG4 1894 aaPredicted RBP10.99□□□□□ -0.65
VAPA-202ENST00000400000 TMEM14EPQ6UXP3 125 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 ZNF407Q9C0G0 2248 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 IGHV3-30P01768 117 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 IGHV3-33P01772 117 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 IGHV3-30-3P0DP02 117 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 IGHV3-30-5P0DP03 117 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 TMEM243Q9BU79 118 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 DEFB112Q30KQ8 113 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 C17orf77Q96MU5 243 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 I3L3M4 83 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
VAPA-202ENST00000400000 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
VAPA-202ENST00000400000 OOSP1A8MZH6 123 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 GNRH2O43555 120 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 SLURP1P55000 103 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 LHFPL1Q86WI0 220 aa10.99□□□□□ -0.65
VAPA-202ENST00000400000 CD5P06127 495 aa10.98□□□□□ -0.65
VAPA-202ENST00000400000 ADAMTSL5Q6ZMM2 481 aa10.98□□□□□ -0.65
VAPA-202ENST00000400000 Q6ZR03 302 aa10.98□□□□□ -0.65
VAPA-202ENST00000400000 NCOR1O75376 2440 aa10.98□□□□□ -0.65
VAPA-202ENST00000400000 IGHV1OR15-1A0A075B7D0 117 aa10.98□□□□□ -0.65
VAPA-202ENST00000400000 CD5LO43866 347 aa10.98□□□□□ -0.65
VAPA-202ENST00000400000 ROS1P08922 2347 aa10.98□□□□□ -0.65
VAPA-202ENST00000400000 H3BMM0 161 aa10.98□□□□□ -0.65
VAPA-202ENST00000400000 UBE2WQ96B02 151 aa10.98□□□□□ -0.65
VAPA-202ENST00000400000 TIMM17AQ99595 171 aa10.98□□□□□ -0.65
VAPA-202ENST00000400000 NDUFS8O00217 210 aa10.97□□□□□ -0.65
VAPA-202ENST00000400000 UBE2CO00762 179 aa10.97□□□□□ -0.65
VAPA-202ENST00000400000 CRLF1O75462 422 aa10.97□□□□□ -0.65
VAPA-202ENST00000400000 IGHG3P01860 377 aa10.97□□□□□ -0.65
VAPA-202ENST00000400000 CRYGCP07315 174 aa10.97□□□□□ -0.65
VAPA-202ENST00000400000 IGKV1-6A0A0C4DH72 117 aa10.97□□□□□ -0.65
VAPA-202ENST00000400000 C17orf58Q2M2W7 97 aa10.97□□□□□ -0.65
VAPA-202ENST00000400000 SMPXQ9UHP9 88 aa10.97□□□□□ -0.65
VAPA-202ENST00000400000 FRMPD3Q5JV73 1810 aa10.97□□□□□ -0.65
VAPA-202ENST00000400000 WDR86Q86TI4 376 aa10.97□□□□□ -0.65
VAPA-202ENST00000400000 FGF16O43320 207 aa10.97□□□□□ -0.65
VAPA-202ENST00000400000 RNF5Q99942 180 aa10.96□□□□□ -0.65
VAPA-202ENST00000400000 MPZP25189 248 aa10.96□□□□□ -0.65
VAPA-202ENST00000400000 SPRNQ5BIV9 151 aa10.96□□□□□ -0.65
VAPA-202ENST00000400000 SEC11AP67812 179 aa10.96□□□□□ -0.65
VAPA-202ENST00000400000 COLCA2A8K830 154 aa10.96□□□□□ -0.66
VAPA-202ENST00000400000 PKDREJQ9NTG1 2253 aa10.96□□□□□ -0.66
VAPA-202ENST00000400000 CDKN1BP46527 198 aa10.95□□□□□ -0.66
VAPA-202ENST00000400000 SDHAF1A6NFY7 115 aa10.95□□□□□ -0.66
VAPA-202ENST00000400000 C2orf66Q6UXQ4 117 aa10.95□□□□□ -0.66
VAPA-202ENST00000400000 FBLN5Q9UBX5 448 aa10.95□□□□□ -0.66
VAPA-202ENST00000400000 PFN1P07737 140 aaKnown RBP10.95□□□□□ -0.66
VAPA-202ENST00000400000 MRPL51Q4U2R6 128 aaKnown RBP10.95□□□□□ -0.66
VAPA-202ENST00000400000 DNAJC30Q96LL9 226 aa10.95□□□□□ -0.66
VAPA-202ENST00000400000 WFDC11Q8NEX6 87 aa10.95□□□□□ -0.66
VAPA-202ENST00000400000 CCL24O00175 119 aa10.95□□□□□ -0.66
VAPA-202ENST00000400000 C17orf82Q86X59 251 aaPredicted RBP10.95□□□□□ -0.66
VAPA-202ENST00000400000 K7ERJ3 54 aa10.94□□□□□ -0.66
VAPA-202ENST00000400000 QRFPP83859 136 aa10.94□□□□□ -0.66
VAPA-202ENST00000400000 MGAMO43451 1857 aa10.94□□□□□ -0.66
VAPA-202ENST00000400000 IGLV3-9A0A075B6K5 115 aa10.94□□□□□ -0.66
VAPA-202ENST00000400000 K7EMI3 77 aa10.94□□□□□ -0.66
VAPA-202ENST00000400000 IGHV4-38-2P0DP08 117 aa10.94□□□□□ -0.66
VAPA-202ENST00000400000 U3KQE9 123 aa10.94□□□□□ -0.66
VAPA-202ENST00000400000 HOXB4P17483 251 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms