RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 RRN3P1Q2M238 152 aa17.73■□□□□ 0.43
RARA-202ENST00000394081 GOSR1O95249 250 aa17.72■□□□□ 0.43
RARA-202ENST00000394081 CCDC144NLQ6NUI1 221 aa17.72■□□□□ 0.43
RARA-202ENST00000394081 GFRALQ6UXV0 394 aa17.72■□□□□ 0.43
RARA-202ENST00000394081 PRO0461Q9UI25 63 aa17.72■□□□□ 0.43
RARA-202ENST00000394081 RALYQ9UKM9 306 aaKnown RBP17.72■□□□□ 0.43
RARA-202ENST00000394081 MYOZ3Q8TDC0 251 aa17.72■□□□□ 0.43
RARA-202ENST00000394081 MSRB1Q9NZV6 116 aa17.72■□□□□ 0.43
RARA-202ENST00000394081 PRRC2CQ9Y520 2896 aaKnown RBP17.71■□□□□ 0.43
RARA-202ENST00000394081 LY6LH3BQJ8 138 aa17.71■□□□□ 0.43
RARA-202ENST00000394081 A0A087WX48 190 aa17.7■□□□□ 0.42
RARA-202ENST00000394081 H3BMG7 143 aa17.7■□□□□ 0.42
RARA-202ENST00000394081 ORM1P02763 201 aa17.7■□□□□ 0.42
RARA-202ENST00000394081 ETDBQ3ZM63 59 aa17.7■□□□□ 0.42
RARA-202ENST00000394081 IGFBPL1Q8WX77 278 aa17.7■□□□□ 0.42
RARA-202ENST00000394081 TRAV40A0A0B4J280 105 aa17.7■□□□□ 0.42
RARA-202ENST00000394081 ZNF672Q499Z4 452 aaPredicted RBP17.7■□□□□ 0.42
RARA-202ENST00000394081 TMEM160Q9NX00 188 aa17.7■□□□□ 0.42
RARA-202ENST00000394081 DTX2Q86UW9 622 aa17.69■□□□□ 0.42
RARA-202ENST00000394081 RNASE6Q93091 150 aaKnown RBP17.69■□□□□ 0.42
RARA-202ENST00000394081 MRPL35Q9NZE8 188 aaKnown RBP17.69■□□□□ 0.42
RARA-202ENST00000394081 ABCA1O95477 2261 aa17.69■□□□□ 0.42
RARA-202ENST00000394081 NCBP2LA6PVI3 153 aaKnown RBP17.69■□□□□ 0.42
RARA-202ENST00000394081 C16orf97H3BN30 126 aa17.69■□□□□ 0.42
RARA-202ENST00000394081 PRB4P10163 310 aaPredicted RBP17.69■□□□□ 0.42
RARA-202ENST00000394081 ATP6V0E2Q8NHE4 81 aa17.69■□□□□ 0.42
RARA-202ENST00000394081 SVILO95425 2214 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 IGLV11-55A0A075B6I3 123 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 TRBV7-3A0A075B6L6 115 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 SCGB2A1O75556 95 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 BSPH1Q075Z2 132 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 LAGE3Q14657 143 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 IGFL3Q6UXB1 125 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 MAPKAPK5-AS1Q8N8E1 139 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 HIST1H4GQ99525 98 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 GAS8-AS1O95177 125 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 IL17RELQ6ZVW7 336 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 Q8TAT8 98 aa17.68■□□□□ 0.42
RARA-202ENST00000394081 TRAV12-1A0A0B4J245 112 aa17.67■□□□□ 0.42
RARA-202ENST00000394081 NBR2O15453 112 aa17.67■□□□□ 0.42
RARA-202ENST00000394081 IGHG4P01861 327 aa17.67■□□□□ 0.42
RARA-202ENST00000394081 SH2D6Q7Z4S9 175 aa17.67■□□□□ 0.42
RARA-202ENST00000394081 NPBQ8NG41 125 aa17.67■□□□□ 0.42
RARA-202ENST00000394081 RBAKDNA6NC62 111 aa17.67■□□□□ 0.42
RARA-202ENST00000394081 NDUFA3O95167 84 aa17.67■□□□□ 0.42
RARA-202ENST00000394081 MUC6Q6W4X9 2439 aa17.66■□□□□ 0.42
RARA-202ENST00000394081 MTURNQ8N3F0 131 aa17.66■□□□□ 0.42
RARA-202ENST00000394081 FANCD2OSQ96PS1 177 aa17.66■□□□□ 0.42
RARA-202ENST00000394081 F8W735 103 aaPredicted RBP17.65■□□□□ 0.42
RARA-202ENST00000394081 DEFB109BQ30KR1 87 aa17.65■□□□□ 0.42
RARA-202ENST00000394081 LCNL1Q6ZST4 164 aa17.65■□□□□ 0.42
RARA-202ENST00000394081 MRAP2Q96G30 205 aa17.65■□□□□ 0.42
RARA-202ENST00000394081 CKS1BP61024 79 aa17.64■□□□□ 0.41
RARA-202ENST00000394081 FAM57AQ8TBR7 257 aa17.64■□□□□ 0.41
RARA-202ENST00000394081 C21orf62Q9NYP8 219 aa17.64■□□□□ 0.41
RARA-202ENST00000394081 ZDBF2Q9HCK1 2354 aa17.64■□□□□ 0.41
RARA-202ENST00000394081 TIMM23O14925 209 aa17.63■□□□□ 0.41
RARA-202ENST00000394081 RAB9AP51151 201 aa17.63■□□□□ 0.41
RARA-202ENST00000394081 NRACQ8N912 160 aa17.63■□□□□ 0.41
RARA-202ENST00000394081 DYNLRB1Q9NP97 96 aa17.63■□□□□ 0.41
RARA-202ENST00000394081 SMAD5-AS1Q9Y6J3 95 aa17.63■□□□□ 0.41
RARA-202ENST00000394081 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.63■□□□□ 0.41
RARA-202ENST00000394081 GATA1P15976 413 aaPredicted RBP17.63■□□□□ 0.41
RARA-202ENST00000394081 F8VRH5 84 aa17.62■□□□□ 0.41
RARA-202ENST00000394081 H7C1H1 209 aa17.62■□□□□ 0.41
RARA-202ENST00000394081 COX7A1P24310 79 aa17.62■□□□□ 0.41
RARA-202ENST00000394081 MYMXA0A1B0GTQ4 84 aa17.61■□□□□ 0.41
RARA-202ENST00000394081 PRRG2O14669 202 aa17.61■□□□□ 0.41
RARA-202ENST00000394081 DLX1P56177 255 aa17.61■□□□□ 0.41
RARA-202ENST00000394081 MRPL16Q9NX20 251 aaKnown RBP17.61■□□□□ 0.41
RARA-202ENST00000394081 IGHV4-4A0A075B6R2 117 aa17.6■□□□□ 0.41
RARA-202ENST00000394081 OR11H12B2RN74 326 aa17.6■□□□□ 0.41
RARA-202ENST00000394081 AMTNQ6UX39 209 aa17.6■□□□□ 0.41
RARA-202ENST00000394081 OR11H1Q8NG94 326 aa17.6■□□□□ 0.41
RARA-202ENST00000394081 OR11H2Q8NH07 326 aa17.6■□□□□ 0.41
RARA-202ENST00000394081 C1QTNF4Q9BXJ3 329 aa17.6■□□□□ 0.41
RARA-202ENST00000394081 APOMO95445 188 aa17.6■□□□□ 0.41
RARA-202ENST00000394081 SCGB2A2Q13296 93 aa17.6■□□□□ 0.41
RARA-202ENST00000394081 HOXA3O43365 443 aaPredicted RBP17.59■□□□□ 0.41
RARA-202ENST00000394081 KLRD1Q13241 179 aa17.59■□□□□ 0.41
RARA-202ENST00000394081 DYNAPQ8N1N2 210 aa17.59■□□□□ 0.41
RARA-202ENST00000394081 SLC25A16P16260 332 aa17.59■□□□□ 0.41
RARA-202ENST00000394081 FOXI1Q12951 378 aa17.59■□□□□ 0.41
RARA-202ENST00000394081 C5orf64Q2M2E5 130 aa17.59■□□□□ 0.41
RARA-202ENST00000394081 CFHR4Q92496 578 aa17.59■□□□□ 0.41
RARA-202ENST00000394081 TMEM238LA0A1B0GVL6 79 aa17.58■□□□□ 0.4
RARA-202ENST00000394081 A6NJY4 79 aa17.58■□□□□ 0.4
RARA-202ENST00000394081 MORN3Q6PF18 240 aaPredicted RBP17.58■□□□□ 0.4
RARA-202ENST00000394081 S4R3C0 116 aa17.58■□□□□ 0.4
RARA-202ENST00000394081 K7EMI3 77 aa17.58■□□□□ 0.4
RARA-202ENST00000394081 CFAP126Q5VTH2 177 aa17.58■□□□□ 0.4
RARA-202ENST00000394081 DPM3Q9P2X0 92 aa17.58■□□□□ 0.4
RARA-202ENST00000394081 DLX4Q92988 240 aaPredicted RBP17.57■□□□□ 0.4
RARA-202ENST00000394081 CYSLTR1Q9Y271 337 aa17.57■□□□□ 0.4
RARA-202ENST00000394081 ZNF318Q5VUA4 2279 aa17.57■□□□□ 0.4
RARA-202ENST00000394081 GPR179Q6PRD1 2367 aa17.56■□□□□ 0.4
RARA-202ENST00000394081 IGKV3D-20A0A0C4DH25 116 aa17.56■□□□□ 0.4
RARA-202ENST00000394081 SLC50A1Q9BRV3 221 aa17.56■□□□□ 0.4
RARA-202ENST00000394081 AGRNO00468 2067 aa17.56■□□□□ 0.4
RARA-202ENST00000394081 CTSGP08311 255 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms