RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 MC5RP33032 325 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 NMUP48645 174 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 FABP6P51161 128 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 TCTAP57738 103 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 RPL24P83731 157 aaKnown RBP2.68□□□□□ -1.98
TRAV39-201ENST00000390466 MZT1Q08AG7 82 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 SCGB2A2Q13296 93 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 C3orf36Q3SXR2 165 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 LINC01559Q495D7 138 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 KLF17Q5JT82 389 aaPredicted RBP2.68□□□□□ -1.98
TRAV39-201ENST00000390466 HES3Q5TGS1 186 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 LYZL1Q6UWQ5 148 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 DHRS13Q6UX07 377 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 AMTNQ6UX39 209 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 C6orf15Q6UXA7 325 aaPredicted RBP2.68□□□□□ -1.98
TRAV39-201ENST00000390466 Q6ZUT4 128 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 SEM1Q6ZVN7 128 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 IL17RELQ6ZVW7 336 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 LYPD1Q8N2G4 141 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 MTURNQ8N3F0 131 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 OR11H1Q8NG94 326 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 OR11H2Q8NH07 326 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 PRSS3P2Q8NHM4 247 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 FLYWCH2Q96CP2 140 aaKnown RBP2.68□□□□□ -1.98
TRAV39-201ENST00000390466 AP1S3Q96PC3 154 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 NGBQ9NPG2 151 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 MRPL16Q9NX20 251 aaKnown RBP2.68□□□□□ -1.98
TRAV39-201ENST00000390466 NHP2Q9NX24 153 aaKnown RBP2.68□□□□□ -1.98
TRAV39-201ENST00000390466 HIGD1AQ9Y241 93 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 SIT1Q9Y3P8 196 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 ACACBO00763 2458 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 CFAP47Q6ZTR5 3102 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 APC2O95996 2303 aa2.68□□□□□ -1.98
TRAV39-201ENST00000390466 EPG5Q9HCE0 2579 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 GPR179Q6PRD1 2367 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 FREM2Q5SZK8 3169 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 A0A087WX48 190 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 LOC389332A0A1B0GUA5 103 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 K7EQM0 130 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 M0QXV9 152 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 SLC25A17O43808 307 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 DPM2O94777 84 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 IGHV1-46P01743 117 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 IGKCP01834 107 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 LGALS1P09382 135 aaKnown RBP2.67□□□□□ -1.98
TRAV39-201ENST00000390466 GATA1P15976 413 aaPredicted RBP2.67□□□□□ -1.98
TRAV39-201ENST00000390466 ORM2P19652 201 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 LORP23490 312 aaPredicted RBP2.67□□□□□ -1.98
TRAV39-201ENST00000390466 CNTFRP26992 372 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 LOXP28300 417 aaPredicted RBP2.67□□□□□ -1.98
TRAV39-201ENST00000390466 PPIFP30405 207 aaKnown RBP2.67□□□□□ -1.98
TRAV39-201ENST00000390466 GLRXP35754 106 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 RPL27AP46776 148 aaKnown RBP2.67□□□□□ -1.98
TRAV39-201ENST00000390466 CXCL12P48061 93 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 FOXI1Q12951 378 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 PDE6HQ13956 83 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 TMEM155Q4W5P6 130 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 ZC2HC1BQ5TFG8 222 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 WFDC3Q8IUB2 231 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 C1orf210Q8IVY1 113 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 RBMXL3Q8N7X1 1067 aaKnown RBP2.67□□□□□ -1.98
TRAV39-201ENST00000390466 ZNF491Q8N8L2 437 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 Q8N8P6 123 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 TMEM178AQ8NBL3 297 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 OR4C13Q8NGP0 309 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 RNF183Q96D59 192 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 DAZAP1Q96EP5 407 aaKnown RBP2.67□□□□□ -1.98
TRAV39-201ENST00000390466 PRR25Q96S07 402 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 AMELXQ99217 191 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 CCL13Q99616 98 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 SCNM1Q9BWG6 230 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 DEFB127Q9H1M4 99 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 GEMIN7Q9H840 131 aaKnown RBP2.67□□□□□ -1.98
TRAV39-201ENST00000390466 MRPL35Q9NZE8 188 aaKnown RBP2.67□□□□□ -1.98
TRAV39-201ENST00000390466 MSRB1Q9NZV6 116 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 C11orf21Q9P2W6 132 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 RNF7Q9UBF6 113 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 CTSZQ9UBR2 303 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 ERG28Q9UKR5 140 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 CHD6Q8TD26 2715 aa2.67□□□□□ -1.98
TRAV39-201ENST00000390466 WDFY3Q8IZQ1 3526 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 FAM208BQ5VWN6 2430 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 IGHV4-4A0A075B6R2 117 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 IGKV2-40A0A087WW87 121 aaPredicted RBP2.66□□□□□ -1.98
TRAV39-201ENST00000390466 TRAV12-1A0A0B4J245 112 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 IGHV7-4-1A0A0J9YVY3 117 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 SERTM2A0A1B0GWG4 89 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 TMEM8BA6NDV4 472 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 ATP5LO75964 103 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 TNFRSF6BO95407 300 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 BRI3O95415 125 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 IGKV2D-40P01614 121 aaPredicted RBP2.66□□□□□ -1.98
TRAV39-201ENST00000390466 IGLV1-47P01700 117 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 PRB4P10163 310 aaPredicted RBP2.66□□□□□ -1.98
TRAV39-201ENST00000390466 CD59P13987 128 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 SRD5A1P18405 259 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 TNFRSF1AP19438 455 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 LEPP41159 167 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 SUB1P53999 127 aaKnown RBP eCLIP2.66□□□□□ -1.98
TRAV39-201ENST00000390466 LYZP61626 148 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms