RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 TRAV9-1A0A075B6T8 112 aa11.52□□□□□ -0.56
PSME4-201ENST00000389993 A0A1B0GW64 132 aa11.52□□□□□ -0.56
PSME4-201ENST00000389993 LINC01619G3V211 115 aa11.52□□□□□ -0.56
PSME4-201ENST00000389993 DPM2O94777 84 aa11.52□□□□□ -0.56
PSME4-201ENST00000389993 BCL6BQ8N143 479 aaPredicted RBP11.52□□□□□ -0.57
PSME4-201ENST00000389993 ZC2HC1AQ96GY0 325 aa11.52□□□□□ -0.57
PSME4-201ENST00000389993 ZNF815PA8K554 130 aa11.52□□□□□ -0.57
PSME4-201ENST00000389993 RNASE13Q5GAN3 156 aaKnown RBP11.52□□□□□ -0.57
PSME4-201ENST00000389993 TRAV13-1A0A0B4J241 112 aa11.52□□□□□ -0.57
PSME4-201ENST00000389993 COX6CP09669 75 aa11.52□□□□□ -0.57
PSME4-201ENST00000389993 CENPVL3A0A0U1RRI6 287 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 A0A1B0GW15 77 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 COTL1Q14019 142 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 STPG4Q8N801 248 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 C1orf159Q96HA4 380 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 PLCE1Q9P212 2302 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 C3orf79P0CE67 100 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 MRAPQ8TCY5 172 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 IGLC7A0M8Q6 106 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 SLURP1P55000 103 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 APRG1Q8IVJ8 170 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 TTC9CQ8N5M4 171 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 PYY3Q5JQD4 70 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 IGLC1P0CG04 106 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 K7EN84 100 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 ITGB1BP1O14713 200 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 SLAQ13239 276 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 FXYD5Q96DB9 178 aa11.51□□□□□ -0.57
PSME4-201ENST00000389993 IGLV2-14P01704 120 aa11.5□□□□□ -0.57
PSME4-201ENST00000389993 ANXA2RQ3ZCQ2 193 aa11.5□□□□□ -0.57
PSME4-201ENST00000389993 LBHQ53QV2 105 aaPredicted RBP11.5□□□□□ -0.57
PSME4-201ENST00000389993 ZNF625Q96I27 306 aaPredicted RBP11.5□□□□□ -0.57
PSME4-201ENST00000389993 ALKBH7Q9BT30 221 aaPredicted RBP11.5□□□□□ -0.57
PSME4-201ENST00000389993 LAMTOR2Q9Y2Q5 125 aa11.5□□□□□ -0.57
PSME4-201ENST00000389993 TMEM242Q9NWH2 141 aa11.5□□□□□ -0.57
PSME4-201ENST00000389993 NXT2Q9NPJ8 142 aaKnown RBP11.49□□□□□ -0.57
PSME4-201ENST00000389993 FOXE3Q13461 319 aa11.49□□□□□ -0.57
PSME4-201ENST00000389993 TRAV9-2A0A087WT02 112 aa11.49□□□□□ -0.57
PSME4-201ENST00000389993 CFAP161Q6P656 301 aa11.49□□□□□ -0.57
PSME4-201ENST00000389993 PRSS57Q6UWY2 283 aa11.49□□□□□ -0.57
PSME4-201ENST00000389993 GAGE12JA6NER3 117 aa11.49□□□□□ -0.57
PSME4-201ENST00000389993 GNRH2O43555 120 aa11.49□□□□□ -0.57
PSME4-201ENST00000389993 GAGE1Q13065 139 aa11.49□□□□□ -0.57
PSME4-201ENST00000389993 GAGE4Q13068 117 aa11.49□□□□□ -0.57
PSME4-201ENST00000389993 GAGE5Q13069 117 aa11.49□□□□□ -0.57
PSME4-201ENST00000389993 GAGE13Q4V321 117 aa11.49□□□□□ -0.57
PSME4-201ENST00000389993 PAPPA-AS1Q5QFB9 102 aa11.49□□□□□ -0.57
PSME4-201ENST00000389993 H3BRN7 92 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 GUSBP1Q15486 140 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 ATP5L2Q7Z4Y8 100 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 LAMA3Q16787 3333 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 GAGE12BA1L429 117 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 GAGE7O76087 117 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 GAGE12FP0CL80 117 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 GAGE12GP0CL81 117 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 GAGE12IP0CL82 117 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 WIPF2Q8TF74 440 aaPredicted RBP11.48□□□□□ -0.57
PSME4-201ENST00000389993 TRBV7-9A0A0J9YWB2 115 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 Q6ZPA2 131 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 SPXQ9BT56 116 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 DPH3P1Q9H4G8 78 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 MS4A6AQ9H2W1 248 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 LYPD6Q86Y78 171 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 LINC00311Q8N616 119 aa11.48□□□□□ -0.57
PSME4-201ENST00000389993 H3BRM9 83 aa11.47□□□□□ -0.57
PSME4-201ENST00000389993 DYNAPQ8N1N2 210 aa11.47□□□□□ -0.57
PSME4-201ENST00000389993 CLPSL2Q6UWE3 100 aa11.47□□□□□ -0.57
PSME4-201ENST00000389993 ZNF491Q8N8L2 437 aa11.47□□□□□ -0.57
PSME4-201ENST00000389993 INSP01308 110 aa11.47□□□□□ -0.57
PSME4-201ENST00000389993 KIAA1549Q9HCM3 1950 aa11.47□□□□□ -0.57
PSME4-201ENST00000389993 OR2K2Q8NGT1 345 aa11.47□□□□□ -0.57
PSME4-201ENST00000389993 CHCHD1Q96BP2 118 aaKnown RBP11.47□□□□□ -0.57
PSME4-201ENST00000389993 TNFRSF6BO95407 300 aa11.47□□□□□ -0.57
PSME4-201ENST00000389993 SRSF2Q01130 221 aaKnown RBP11.46□□□□□ -0.57
PSME4-201ENST00000389993 KAAG1Q9UBP8 84 aa11.46□□□□□ -0.57
PSME4-201ENST00000389993 Q8N7P7 452 aa11.46□□□□□ -0.57
PSME4-201ENST00000389993 DEFB113Q30KQ7 82 aa11.46□□□□□ -0.57
PSME4-201ENST00000389993 V9GYV3 84 aa11.46□□□□□ -0.57
PSME4-201ENST00000389993 LINC00158P58513 81 aa11.46□□□□□ -0.58
PSME4-201ENST00000389993 ORMDL2Q53FV1 153 aa11.46□□□□□ -0.58
PSME4-201ENST00000389993 MRPL36Q9P0J6 103 aaKnown RBP11.46□□□□□ -0.58
PSME4-201ENST00000389993 SPCS1Q9Y6A9 102 aa11.46□□□□□ -0.58
PSME4-201ENST00000389993 PTPN13Q12923 2485 aa11.46□□□□□ -0.58
PSME4-201ENST00000389993 IL15RAQ13261 267 aa11.45□□□□□ -0.58
PSME4-201ENST00000389993 IGHV7-81A0A0B4J1V7 117 aa11.45□□□□□ -0.58
PSME4-201ENST00000389993 YPEL3P61236 119 aaPredicted RBP11.45□□□□□ -0.58
PSME4-201ENST00000389993 C1orf229Q6ZS94 237 aaPredicted RBP11.45□□□□□ -0.58
PSME4-201ENST00000389993 ODF3L1Q8IXM7 274 aa11.45□□□□□ -0.58
PSME4-201ENST00000389993 CRPP02741 224 aa11.45□□□□□ -0.58
PSME4-201ENST00000389993 IGLV2-23P01705 113 aa11.45□□□□□ -0.58
PSME4-201ENST00000389993 A0A087WX48 190 aa11.44□□□□□ -0.58
PSME4-201ENST00000389993 A0A1B0GWB2 263 aa11.44□□□□□ -0.58
PSME4-201ENST00000389993 SAMD13Q5VXD3 122 aa11.44□□□□□ -0.58
PSME4-201ENST00000389993 Q8NFD4 153 aa11.44□□□□□ -0.58
PSME4-201ENST00000389993 PRR25Q96S07 402 aa11.44□□□□□ -0.58
PSME4-201ENST00000389993 PFN1P07737 140 aaKnown RBP11.44□□□□□ -0.58
PSME4-201ENST00000389993 DNAL4O96015 105 aa11.44□□□□□ -0.58
PSME4-201ENST00000389993 PRADC1Q9BSG0 188 aa11.44□□□□□ -0.58
PSME4-201ENST00000389993 ARHGAP32A7KAX9 2087 aa11.43□□□□□ -0.58
PSME4-201ENST00000389993 LINC01548A6NM66 108 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms