RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 NUP210LQ5VU65 1888 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 IGKV1OR2-108A0A075B7D4 117 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 G3V318 75 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 BRWD1-AS2P59051 145 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 IGF2BP2-AS1Q96M15 143 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 C17orf77Q96MU5 243 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 FCN3O75636 299 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 GAGE13Q4V321 117 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 PRSS57Q6UWY2 283 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 MTURNQ8N3F0 131 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 CHAC1Q9BUX1 264 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 CSTL1Q9H114 145 aa12.79□□□□□ -0.36
PTPRN2-201ENST00000389413 TMEM8BA6NDV4 472 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 B4DSR2 109 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 MSMPQ1L6U9 139 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 IGKV3OR2-268A0A0C4DH90 116 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 COX8AP10176 69 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 LGALS9BQ3B8N2 356 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 LGALS9CQ6DKI2 356 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 TRAV12-3A0A0B4J271 114 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 C22orf46C9J442 243 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 RIPPLY3P57055 190 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 TMEM101Q96IK0 257 aa12.78□□□□□ -0.36
PTPRN2-201ENST00000389413 NOTCH3Q9UM47 2321 aa12.77□□□□□ -0.36
PTPRN2-201ENST00000389413 A0A1B0GV72 72 aa12.77□□□□□ -0.36
PTPRN2-201ENST00000389413 PROP1O75360 226 aa12.77□□□□□ -0.36
PTPRN2-201ENST00000389413 IGF2-ASQ6U949 168 aa12.77□□□□□ -0.36
PTPRN2-201ENST00000389413 WISP2O76076 250 aa12.77□□□□□ -0.36
PTPRN2-201ENST00000389413 MAJINQ3KP22 176 aa12.77□□□□□ -0.36
PTPRN2-201ENST00000389413 TTC32Q5I0X7 151 aa12.77□□□□□ -0.36
PTPRN2-201ENST00000389413 Q8N8P6 123 aa12.77□□□□□ -0.36
PTPRN2-201ENST00000389413 GP9P14770 177 aa12.77□□□□□ -0.37
PTPRN2-201ENST00000389413 DSCR9P59020 149 aa12.77□□□□□ -0.37
PTPRN2-201ENST00000389413 IGHV2-70DA0A0C4DH43 119 aa12.77□□□□□ -0.37
PTPRN2-201ENST00000389413 CD28P10747 220 aa12.77□□□□□ -0.37
PTPRN2-201ENST00000389413 GNLYP22749 145 aa12.77□□□□□ -0.37
PTPRN2-201ENST00000389413 DAZ1Q9NQZ3 744 aaKnown RBP12.77□□□□□ -0.37
PTPRN2-201ENST00000389413 PRR14LQ5THK1 2151 aa12.76□□□□□ -0.37
PTPRN2-201ENST00000389413 TRAV2A0A0B4J234 112 aa12.76□□□□□ -0.37
PTPRN2-201ENST00000389413 INS-IGF2F8WCM5 200 aa12.76□□□□□ -0.37
PTPRN2-201ENST00000389413 SPOCK3Q9BQ16 436 aa12.76□□□□□ -0.37
PTPRN2-201ENST00000389413 OVOL3O00110 214 aa12.76□□□□□ -0.37
PTPRN2-201ENST00000389413 TDRG1Q3Y452 100 aa12.76□□□□□ -0.37
PTPRN2-201ENST00000389413 C8orf86Q6ZUL3 223 aa12.76□□□□□ -0.37
PTPRN2-201ENST00000389413 PRSS33Q8NF86 280 aa12.76□□□□□ -0.37
PTPRN2-201ENST00000389413 VGLL1Q99990 258 aa12.76□□□□□ -0.37
PTPRN2-201ENST00000389413 NPYP01303 97 aa12.75□□□□□ -0.37
PTPRN2-201ENST00000389413 RITA1Q96K30 269 aa12.75□□□□□ -0.37
PTPRN2-201ENST00000389413 DOPEY2Q9Y3R5 2298 aa12.75□□□□□ -0.37
PTPRN2-201ENST00000389413 BDP1A6H8Y1 2624 aa12.74□□□□□ -0.37
PTPRN2-201ENST00000389413 IGKV1-17P01599 117 aa12.74□□□□□ -0.37
PTPRN2-201ENST00000389413 ZNF876PQ49A33 203 aa12.74□□□□□ -0.37
PTPRN2-201ENST00000389413 RUSC1-AS1Q66K80 236 aa12.74□□□□□ -0.37
PTPRN2-201ENST00000389413 I3L2K1 104 aa12.74□□□□□ -0.37
PTPRN2-201ENST00000389413 DEFB104AQ8WTQ1 72 aa12.74□□□□□ -0.37
PTPRN2-201ENST00000389413 SIGMAR1Q99720 223 aa12.74□□□□□ -0.37
PTPRN2-201ENST00000389413 PLA2G5P39877 138 aa12.73□□□□□ -0.37
PTPRN2-201ENST00000389413 FAM120AOSQ5T036 256 aa12.73□□□□□ -0.37
PTPRN2-201ENST00000389413 ZNF747Q9BV97 191 aa12.73□□□□□ -0.37
PTPRN2-201ENST00000389413 C1orf122Q6ZSJ8 110 aa12.73□□□□□ -0.37
PTPRN2-201ENST00000389413 PTPRSQ13332 1948 aa12.73□□□□□ -0.37
PTPRN2-201ENST00000389413 OR11H6Q8NGC7 330 aa12.73□□□□□ -0.37
PTPRN2-201ENST00000389413 WDR87Q6ZQQ6 2873 aa12.73□□□□□ -0.37
PTPRN2-201ENST00000389413 CGB3P0DN86 165 aa12.73□□□□□ -0.37
PTPRN2-201ENST00000389413 CGB7P0DN87 165 aa12.73□□□□□ -0.37
PTPRN2-201ENST00000389413 STHQ8IWL8 128 aa12.73□□□□□ -0.37
PTPRN2-201ENST00000389413 YPEL4Q96NS1 127 aa12.73□□□□□ -0.37
PTPRN2-201ENST00000389413 IGHV3-64A0A075B6Q5 118 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 IGHV1-69DA0A0B4J2H0 117 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 K7EIM0 57 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 DNAL4O96015 105 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 IGLV2-23P01705 113 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 IGHV1-69P01742 117 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 NCKAP5O14513 1909 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 A8MWV9 139 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 E7EUB6 86 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 ESDP10768 282 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 EIF4EBP1Q13541 118 aaPredicted RBP12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 DTX2Q86UW9 622 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 TNCP24821 2201 aa12.72□□□□□ -0.37
PTPRN2-201ENST00000389413 FRMD6-AS1P0C7T7 363 aa12.71□□□□□ -0.37
PTPRN2-201ENST00000389413 KLF12Q9Y4X4 402 aa12.71□□□□□ -0.37
PTPRN2-201ENST00000389413 A0A087WWL8 130 aa12.71□□□□□ -0.37
PTPRN2-201ENST00000389413 BVES-AS1Q5T3Y7 98 aa12.71□□□□□ -0.37
PTPRN2-201ENST00000389413 CST9LQ9H4G1 147 aa12.71□□□□□ -0.37
PTPRN2-201ENST00000389413 TRGV2A0A075B6R0 118 aa12.71□□□□□ -0.37
PTPRN2-201ENST00000389413 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
PTPRN2-201ENST00000389413 ANKHD1Q8IWZ3 2542 aaKnown RBP12.71□□□□□ -0.38
PTPRN2-201ENST00000389413 TMEM238C9JI98 176 aa12.71□□□□□ -0.38
PTPRN2-201ENST00000389413 C2orf66Q6UXQ4 117 aa12.71□□□□□ -0.38
PTPRN2-201ENST00000389413 ERG28Q9UKR5 140 aa12.71□□□□□ -0.38
PTPRN2-201ENST00000389413 A0A1W2PRX2 142 aa12.7□□□□□ -0.38
PTPRN2-201ENST00000389413 C9orf118A6NHY6 69 aa12.7□□□□□ -0.38
PTPRN2-201ENST00000389413 EGR2P11161 476 aaPredicted RBP12.7□□□□□ -0.38
PTPRN2-201ENST00000389413 PLEKHB2Q96CS7 222 aa12.7□□□□□ -0.38
PTPRN2-201ENST00000389413 YAE1D1Q9NRH1 226 aa12.7□□□□□ -0.38
PTPRN2-201ENST00000389413 ARFGEF3Q5TH69 2177 aa12.7□□□□□ -0.38
PTPRN2-201ENST00000389413 IGKV3D-20A0A0C4DH25 116 aa12.7□□□□□ -0.38
PTPRN2-201ENST00000389413 NDUFS8O00217 210 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms