RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 KCNIP2Q9NS61 270 aa18.43■□□□□ 0.54
NPHP3-202ENST00000383282 TNFSF18Q9UNG2 199 aa18.43■□□□□ 0.54
NPHP3-202ENST00000383282 C17orf112F2Z3M2 114 aa18.42■□□□□ 0.54
NPHP3-202ENST00000383282 MORN5Q5VZ52 161 aa18.42■□□□□ 0.54
NPHP3-202ENST00000383282 DNAJC4Q9NNZ3 241 aa18.42■□□□□ 0.54
NPHP3-202ENST00000383282 TRAV26-1A0A087WT03 109 aa18.41■□□□□ 0.54
NPHP3-202ENST00000383282 PRAC2D3DTV9 90 aa18.41■□□□□ 0.54
NPHP3-202ENST00000383282 G3V3Q6 166 aa18.41■□□□□ 0.54
NPHP3-202ENST00000383282 ARPC5O15511 151 aa18.41■□□□□ 0.54
NPHP3-202ENST00000383282 IGLC2P0DOY2 106 aa18.41■□□□□ 0.54
NPHP3-202ENST00000383282 M6PRP20645 277 aa18.41■□□□□ 0.54
NPHP3-202ENST00000383282 LEPP41159 167 aa18.41■□□□□ 0.54
NPHP3-202ENST00000383282 RPL29P47914 159 aaKnown RBP18.41■□□□□ 0.54
NPHP3-202ENST00000383282 ZNF266Q14584 549 aa18.41■□□□□ 0.54
NPHP3-202ENST00000383282 GUK1Q16774 197 aa18.41■□□□□ 0.54
NPHP3-202ENST00000383282 OR1L4Q8NGR5 311 aa18.41■□□□□ 0.54
NPHP3-202ENST00000383282 Q9H8V8 135 aa18.41■□□□□ 0.54
NPHP3-202ENST00000383282 J3KRW8 73 aa18.4■□□□□ 0.54
NPHP3-202ENST00000383282 LINC00612Q8N6U2 182 aa18.4■□□□□ 0.54
NPHP3-202ENST00000383282 RXFP4Q8TDU9 374 aa18.4■□□□□ 0.54
NPHP3-202ENST00000383282 SAT2Q96F10 170 aaPredicted RBP18.4■□□□□ 0.54
NPHP3-202ENST00000383282 ZNF503Q96F45 646 aa18.4■□□□□ 0.54
NPHP3-202ENST00000383282 SLC39A9Q9NUM3 307 aa18.4■□□□□ 0.54
NPHP3-202ENST00000383282 ABCA13Q86UQ4 5058 aa18.4■□□□□ 0.54
NPHP3-202ENST00000383282 GAGE12BA1L429 117 aa18.39■□□□□ 0.53
NPHP3-202ENST00000383282 RNF222A6NCQ9 220 aa18.39■□□□□ 0.53
NPHP3-202ENST00000383282 GAGE7O76087 117 aa18.39■□□□□ 0.53
NPHP3-202ENST00000383282 GAGE12FP0CL80 117 aa18.39■□□□□ 0.53
NPHP3-202ENST00000383282 GAGE12GP0CL81 117 aa18.39■□□□□ 0.53
NPHP3-202ENST00000383282 GAGE12IP0CL82 117 aa18.39■□□□□ 0.53
NPHP3-202ENST00000383282 TTC32Q5I0X7 151 aa18.39■□□□□ 0.53
NPHP3-202ENST00000383282 ODF3Q96PU9 254 aa18.39■□□□□ 0.53
NPHP3-202ENST00000383282 PFDN5Q99471 154 aa18.39■□□□□ 0.53
NPHP3-202ENST00000383282 A0A0J9YY99 117 aa18.38■□□□□ 0.53
NPHP3-202ENST00000383282 H3BQ15 152 aa18.38■□□□□ 0.53
NPHP3-202ENST00000383282 AKAP14Q86UN6 197 aa18.38■□□□□ 0.53
NPHP3-202ENST00000383282 ST6GAL2Q96JF0 529 aa18.38■□□□□ 0.53
NPHP3-202ENST00000383282 WFDC1Q9HC57 220 aa18.38■□□□□ 0.53
NPHP3-202ENST00000383282 PYGO2Q9BRQ0 406 aa18.37■□□□□ 0.53
NPHP3-202ENST00000383282 TRAV12-3A0A0B4J271 114 aa18.36■□□□□ 0.53
NPHP3-202ENST00000383282 NPIPB6E9PJ23 425 aa18.36■□□□□ 0.53
NPHP3-202ENST00000383282 CDK2AP2O75956 126 aa18.36■□□□□ 0.53
NPHP3-202ENST00000383282 CT45A10P0DMU9 189 aa18.36■□□□□ 0.53
NPHP3-202ENST00000383282 BORCS7-ASMTA0A0B4J1R7 106 aa18.35■□□□□ 0.53
NPHP3-202ENST00000383282 TRAV5A0A0B4J249 113 aa18.35■□□□□ 0.53
NPHP3-202ENST00000383282 ZNF253O75346 499 aa18.35■□□□□ 0.53
NPHP3-202ENST00000383282 TCTE3Q8IZS6 198 aa18.35■□□□□ 0.53
NPHP3-202ENST00000383282 A0A1B0GVG6 124 aa18.34■□□□□ 0.53
NPHP3-202ENST00000383282 HMSDA8MTL9 139 aa18.34■□□□□ 0.53
NPHP3-202ENST00000383282 H3BNG1 76 aa18.34■□□□□ 0.53
NPHP3-202ENST00000383282 HOXA5P20719 270 aa18.34■□□□□ 0.53
NPHP3-202ENST00000383282 HSPG2P98160 4391 aa18.33■□□□□ 0.53
NPHP3-202ENST00000383282 DAZ2Q13117 558 aaKnown RBP18.33■□□□□ 0.52
NPHP3-202ENST00000383282 MRPL53Q96EL3 112 aaKnown RBP18.33■□□□□ 0.52
NPHP3-202ENST00000383282 UPK3BQ9BT76 320 aa18.33■□□□□ 0.52
NPHP3-202ENST00000383282 ZNF586Q9NXT0 402 aa18.33■□□□□ 0.52
NPHP3-202ENST00000383282 LRP1BQ9NZR2 4599 aa18.32■□□□□ 0.52
NPHP3-202ENST00000383282 TAAR5O14804 337 aa18.32■□□□□ 0.52
NPHP3-202ENST00000383282 SLC25A5P05141 298 aaKnown RBP18.32■□□□□ 0.52
NPHP3-202ENST00000383282 ZNF345Q14585 488 aa18.32■□□□□ 0.52
NPHP3-202ENST00000383282 FFAR4Q5NUL3 377 aa18.32■□□□□ 0.52
NPHP3-202ENST00000383282 HSD17B11Q8NBQ5 300 aa18.32■□□□□ 0.52
NPHP3-202ENST00000383282 OR11H4Q8NGC9 324 aa18.32■□□□□ 0.52
NPHP3-202ENST00000383282 KRTAP4-5Q9BYR2 181 aa18.32■□□□□ 0.52
NPHP3-202ENST00000383282 Q9H3A6 140 aa18.32■□□□□ 0.52
NPHP3-202ENST00000383282 ZNF680Q8NEM1 530 aa18.31■□□□□ 0.52
NPHP3-202ENST00000383282 TRBV19A0A075B6N1 114 aa18.3■□□□□ 0.52
NPHP3-202ENST00000383282 A0A0D9SG52 128 aa18.3■□□□□ 0.52
NPHP3-202ENST00000383282 A0A1W2PPQ1 181 aa18.3■□□□□ 0.52
NPHP3-202ENST00000383282 C7orf71A4D174 169 aa18.3■□□□□ 0.52
NPHP3-202ENST00000383282 ESRGQ1W209 222 aa18.3■□□□□ 0.52
NPHP3-202ENST00000383282 Q6ZTI0 123 aa18.3■□□□□ 0.52
NPHP3-202ENST00000383282 TMPRSS5Q9H3S3 457 aa18.3■□□□□ 0.52
NPHP3-202ENST00000383282 PRELID1Q9Y255 219 aa18.3■□□□□ 0.52
NPHP3-202ENST00000383282 MRPS16Q9Y3D3 137 aaKnown RBP18.3■□□□□ 0.52
NPHP3-202ENST00000383282 TIMM9Q9Y5J7 89 aa18.3■□□□□ 0.52
NPHP3-202ENST00000383282 TRGV2A0A075B6R0 118 aa18.29■□□□□ 0.52
NPHP3-202ENST00000383282 RPL7L1Q6DKI1 246 aaKnown RBP18.29■□□□□ 0.52
NPHP3-202ENST00000383282 SPATA12Q7Z6I5 190 aa18.29■□□□□ 0.52
NPHP3-202ENST00000383282 KCNRGQ8N5I3 272 aa18.29■□□□□ 0.52
NPHP3-202ENST00000383282 MAPKAPK5-AS1Q8N8E1 139 aa18.29■□□□□ 0.52
NPHP3-202ENST00000383282 ARPC5LQ9BPX5 153 aa18.29■□□□□ 0.52
NPHP3-202ENST00000383282 M0R3E3 92 aa18.28■□□□□ 0.52
NPHP3-202ENST00000383282 C1QBP02746 253 aa18.28■□□□□ 0.52
NPHP3-202ENST00000383282 HIST1H1EP10412 219 aaKnown RBP18.28■□□□□ 0.52
NPHP3-202ENST00000383282 PDE6HQ13956 83 aa18.28■□□□□ 0.52
NPHP3-202ENST00000383282 GCSAMLQ5JQS6 135 aa18.28■□□□□ 0.52
NPHP3-202ENST00000383282 LINC00477Q96M19 166 aa18.28■□□□□ 0.52
NPHP3-202ENST00000383282 KRTAP1-5Q9BYS1 174 aa18.28■□□□□ 0.52
NPHP3-202ENST00000383282 TMEM14CQ9P0S9 112 aa18.28■□□□□ 0.52
NPHP3-202ENST00000383282 KANTRA0A1W2PQU2 76 aa18.27■□□□□ 0.52
NPHP3-202ENST00000383282 BTF3P20290 206 aaKnown RBP18.27■□□□□ 0.52
NPHP3-202ENST00000383282 ERCC8Q13216 396 aa18.27■□□□□ 0.52
NPHP3-202ENST00000383282 ACOT6Q3I5F7 207 aaPredicted RBP18.27■□□□□ 0.52
NPHP3-202ENST00000383282 GSN-AS1Q9NRJ2 163 aa18.27■□□□□ 0.52
NPHP3-202ENST00000383282 PFDN1O60925 122 aa18.26■□□□□ 0.51
NPHP3-202ENST00000383282 ATP6V0CP27449 155 aa18.26■□□□□ 0.51
NPHP3-202ENST00000383282 PSMG3Q9BT73 122 aaPredicted RBP18.26■□□□□ 0.51
NPHP3-202ENST00000383282 MRPL32Q9BYC8 188 aaKnown RBP18.26■□□□□ 0.51
NPHP3-202ENST00000383282 AAMDCQ9H7C9 122 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms