RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 IGHV4-59P01825 116 aa11.22□□□□□ -0.61
SHROOM1-203ENST00000378679 ORMDL3Q8N138 153 aa11.22□□□□□ -0.61
SHROOM1-203ENST00000378679 PDE6HQ13956 83 aa11.22□□□□□ -0.61
SHROOM1-203ENST00000378679 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
SHROOM1-203ENST00000378679 KLHL30-AS1Q8NEE0 82 aa11.22□□□□□ -0.61
SHROOM1-203ENST00000378679 A0A1B0GW15 77 aa11.22□□□□□ -0.61
SHROOM1-203ENST00000378679 PSG3Q16557 428 aa11.22□□□□□ -0.61
SHROOM1-203ENST00000378679 DUX3Q96PT4 197 aa11.22□□□□□ -0.61
SHROOM1-203ENST00000378679 GNB1LQ9BYB4 327 aa11.22□□□□□ -0.61
SHROOM1-203ENST00000378679 TRBV19A0A075B6N1 114 aa11.21□□□□□ -0.61
SHROOM1-203ENST00000378679 NSUN5P1Q3KNT7 163 aa11.21□□□□□ -0.61
SHROOM1-203ENST00000378679 ZNF491Q8N8L2 437 aa11.21□□□□□ -0.61
SHROOM1-203ENST00000378679 TRAV9-2A0A087WT02 112 aa11.21□□□□□ -0.61
SHROOM1-203ENST00000378679 IGHV7-81A0A0B4J1V7 117 aa11.21□□□□□ -0.61
SHROOM1-203ENST00000378679 H3BVH4 76 aa11.21□□□□□ -0.61
SHROOM1-203ENST00000378679 FCN3O75636 299 aa11.21□□□□□ -0.61
SHROOM1-203ENST00000378679 DEFB113Q30KQ7 82 aa11.21□□□□□ -0.61
SHROOM1-203ENST00000378679 LINC00574Q9H8X3 128 aa11.21□□□□□ -0.61
SHROOM1-203ENST00000378679 DMDP11532 3685 aa11.21□□□□□ -0.61
SHROOM1-203ENST00000378679 PAX1P15863 534 aa11.21□□□□□ -0.62
SHROOM1-203ENST00000378679 C7orf71A4D174 169 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 LINC00614P0C842 121 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 FABP2P12104 132 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 Q1RN00 199 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 SCGB1D4Q6XE38 83 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 C1orf229Q6ZS94 237 aaPredicted RBP11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 LINC01587Q99440 93 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 BLCAPP62952 87 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 TMEM249Q2WGJ8 235 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 TTC9CQ8N5M4 171 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 ASPMQ8IZT6 3477 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 CIDEAO60543 219 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 P0C879 139 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 LMO4P61968 165 aa11.2□□□□□ -0.62
SHROOM1-203ENST00000378679 IGKV1-17P01599 117 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 TMEM97Q5BJF2 176 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 RNF182Q8N6D2 247 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 NUP35Q8NFH5 326 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 TRAV8-6A0A0B4J262 113 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 LOC107984156A0A0G2JMH3 177 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 IGLV2-23P01705 113 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 Q86TA4 180 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 ARL17AQ8IVW1 177 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 KIR2DL4Q99706 377 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 FRMD6-AS1P0C7T7 363 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 C11orf1Q9H5F2 150 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 K7EIM0 57 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 Q8N9W7 124 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 FXYD5Q96DB9 178 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 RCHY1Q96PM5 261 aa11.19□□□□□ -0.62
SHROOM1-203ENST00000378679 DOPEY1Q5JWR5 2465 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 IGKV1OR2-108A0A075B7D4 117 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 NPIPB6E9PJ23 425 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 ERCC8Q13216 396 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 DNLZQ5SXM8 178 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 NPBQ8NG41 125 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 ZC2HC1AQ96GY0 325 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 EXPH5Q8NEV8 1989 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 H7C2G1 150 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 HOXA3O43365 443 aaPredicted RBP11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 UBE2V1Q13404 147 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 TMEM190Q8WZ59 177 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 SMAGPQ0VAQ4 97 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 LYZL1Q6UWQ5 148 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 STHQ8IWL8 128 aa11.18□□□□□ -0.62
SHROOM1-203ENST00000378679 SH2D1AO60880 128 aa11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 Q71RC1 249 aaPredicted RBP11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 ATP5L2Q7Z4Y8 100 aa11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 ZNF502Q8TBZ5 544 aa11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 LOC400499M0QZD8 3231 aa11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 TYMSP04818 313 aa11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 SIRPDQ9H106 197 aa11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 MRPL36Q9P0J6 103 aaKnown RBP11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 SPCS1Q9Y6A9 102 aa11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 H3BRN7 92 aa11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 SRSF9Q13242 221 aaKnown RBP eCLIP11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 TMEM95Q3KNT9 176 aa11.17□□□□□ -0.62
SHROOM1-203ENST00000378679 DSCAML1Q8TD84 2053 aa11.16□□□□□ -0.62
SHROOM1-203ENST00000378679 I3L2K1 104 aa11.16□□□□□ -0.62
SHROOM1-203ENST00000378679 HERVK_113P61574 105 aa11.16□□□□□ -0.62
SHROOM1-203ENST00000378679 LINC00477Q96M19 166 aa11.16□□□□□ -0.62
SHROOM1-203ENST00000378679 ACANP16112 2415 aa11.16□□□□□ -0.62
SHROOM1-203ENST00000378679 SAP30O75446 220 aa11.16□□□□□ -0.62
SHROOM1-203ENST00000378679 MORN5Q5VZ52 161 aa11.16□□□□□ -0.62
SHROOM1-203ENST00000378679 LY6G5BQ8NDX9 201 aa11.16□□□□□ -0.62
SHROOM1-203ENST00000378679 RNASE8Q8TDE3 154 aaKnown RBP11.16□□□□□ -0.62
SHROOM1-203ENST00000378679 C17orf77Q96MU5 243 aa11.16□□□□□ -0.62
SHROOM1-203ENST00000378679 C11orf52Q96A22 123 aa11.16□□□□□ -0.62
SHROOM1-203ENST00000378679 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
SHROOM1-203ENST00000378679 TEX22C9J3V5 150 aa11.15□□□□□ -0.62
SHROOM1-203ENST00000378679 IGLC2P0DOY2 106 aa11.15□□□□□ -0.62
SHROOM1-203ENST00000378679 IGLC3P0DOY3 106 aa11.15□□□□□ -0.62
SHROOM1-203ENST00000378679 PATE2Q6UY27 113 aa11.15□□□□□ -0.62
SHROOM1-203ENST00000378679 C20orf144Q9BQM9 153 aa11.15□□□□□ -0.62
SHROOM1-203ENST00000378679 TMEM14CQ9P0S9 112 aa11.15□□□□□ -0.62
SHROOM1-203ENST00000378679 FLNBO75369 2602 aaKnown RBP11.15□□□□□ -0.62
SHROOM1-203ENST00000378679 LEPP41159 167 aa11.15□□□□□ -0.62
SHROOM1-203ENST00000378679 ZNF295-AS1Q8N0V1 137 aa11.15□□□□□ -0.62
SHROOM1-203ENST00000378679 IGLV11-55A0A075B6I3 123 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms