RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 WT1-ASQ06250 92 aa19.1■□□□□ 0.65
RAPGEF1-203ENST00000372195 UBE2E1P51965 193 aa19.1■□□□□ 0.65
RAPGEF1-203ENST00000372195 ANAPC10Q9UM13 185 aa19.1■□□□□ 0.65
RAPGEF1-203ENST00000372195 IGLC2P0DOY2 106 aa19.09■□□□□ 0.65
RAPGEF1-203ENST00000372195 IGLC3P0DOY3 106 aa19.09■□□□□ 0.65
RAPGEF1-203ENST00000372195 GAGE7O76087 117 aa19.09■□□□□ 0.65
RAPGEF1-203ENST00000372195 GAGE12FP0CL80 117 aa19.09■□□□□ 0.65
RAPGEF1-203ENST00000372195 GAGE12GP0CL81 117 aa19.09■□□□□ 0.65
RAPGEF1-203ENST00000372195 GAGE12IP0CL82 117 aa19.09■□□□□ 0.65
RAPGEF1-203ENST00000372195 VWC2Q2TAL6 325 aa19.09■□□□□ 0.65
RAPGEF1-203ENST00000372195 SP5Q6BEB4 398 aaPredicted RBP19.09■□□□□ 0.65
RAPGEF1-203ENST00000372195 DTX1Q86Y01 620 aa19.09■□□□□ 0.65
RAPGEF1-203ENST00000372195 LINC01619G3V211 115 aa19.08■□□□□ 0.65
RAPGEF1-203ENST00000372195 GAGE6Q13070 117 aa19.08■□□□□ 0.65
RAPGEF1-203ENST00000372195 I3L3M4 83 aa19.08■□□□□ 0.65
RAPGEF1-203ENST00000372195 SPRY2O43597 315 aa19.08■□□□□ 0.65
RAPGEF1-203ENST00000372195 CFPP27918 469 aa19.08■□□□□ 0.65
RAPGEF1-203ENST00000372195 HLA-DMBP28068 263 aa19.08■□□□□ 0.65
RAPGEF1-203ENST00000372195 F5H768 121 aa19.08■□□□□ 0.64
RAPGEF1-203ENST00000372195 RSPO1Q2MKA7 263 aaPredicted RBP19.08■□□□□ 0.64
RAPGEF1-203ENST00000372195 SRSF8Q9BRL6 282 aaKnown RBP19.08■□□□□ 0.64
RAPGEF1-203ENST00000372195 SIGLEC8Q9NYZ4 499 aa19.08■□□□□ 0.64
RAPGEF1-203ENST00000372195 NXPH4O95158 308 aa19.08■□□□□ 0.64
RAPGEF1-203ENST00000372195 LOXP28300 417 aaPredicted RBP19.08■□□□□ 0.64
RAPGEF1-203ENST00000372195 RNF166Q96A37 237 aaPredicted RBP19.07■□□□□ 0.64
RAPGEF1-203ENST00000372195 IGHV1-69DA0A0B4J2H0 117 aa19.07■□□□□ 0.64
RAPGEF1-203ENST00000372195 IGHV1-69P01742 117 aa19.07■□□□□ 0.64
RAPGEF1-203ENST00000372195 C15orf65H3BRN8 121 aa19.07■□□□□ 0.64
RAPGEF1-203ENST00000372195 C9orf153Q5TBE3 101 aa19.07■□□□□ 0.64
RAPGEF1-203ENST00000372195 H3BRN7 92 aa19.07■□□□□ 0.64
RAPGEF1-203ENST00000372195 ZNRF2Q8NHG8 242 aa19.07■□□□□ 0.64
RAPGEF1-203ENST00000372195 Q96MF0 132 aa19.07■□□□□ 0.64
RAPGEF1-203ENST00000372195 WDR81Q562E7 1941 aa19.07■□□□□ 0.64
RAPGEF1-203ENST00000372195 CLPSL2Q6UWE3 100 aa19.07■□□□□ 0.64
RAPGEF1-203ENST00000372195 NPYP01303 97 aa19.06■□□□□ 0.64
RAPGEF1-203ENST00000372195 Q6ZVH6 145 aa19.06■□□□□ 0.64
RAPGEF1-203ENST00000372195 DOCK11Q5JSL3 2073 aa19.06■□□□□ 0.64
RAPGEF1-203ENST00000372195 YPEL3P61236 119 aaPredicted RBP19.06■□□□□ 0.64
RAPGEF1-203ENST00000372195 F8WEM9 126 aa19.06■□□□□ 0.64
RAPGEF1-203ENST00000372195 K7EN84 100 aa19.05■□□□□ 0.64
RAPGEF1-203ENST00000372195 C1QTNF4Q9BXJ3 329 aa19.05■□□□□ 0.64
RAPGEF1-203ENST00000372195 PRR25Q96S07 402 aa19.05■□□□□ 0.64
RAPGEF1-203ENST00000372195 MYO7BQ6PIF6 2116 aa19.05■□□□□ 0.64
RAPGEF1-203ENST00000372195 TMEM190Q8WZ59 177 aa19.05■□□□□ 0.64
RAPGEF1-203ENST00000372195 SDHAF1A6NFY7 115 aa19.04■□□□□ 0.64
RAPGEF1-203ENST00000372195 POLEQ07864 2286 aa19.04■□□□□ 0.64
RAPGEF1-203ENST00000372195 IGHV2-70DA0A0C4DH43 119 aa19.04■□□□□ 0.64
RAPGEF1-203ENST00000372195 Q8TCH9 128 aa19.04■□□□□ 0.64
RAPGEF1-203ENST00000372195 IGHV2-5P01817 119 aa19.04■□□□□ 0.64
RAPGEF1-203ENST00000372195 ETDBQ3ZM63 59 aa19.03■□□□□ 0.64
RAPGEF1-203ENST00000372195 C10orf91Q5T1B1 145 aa19.03■□□□□ 0.64
RAPGEF1-203ENST00000372195 IGLV3-9A0A075B6K5 115 aa19.03■□□□□ 0.64
RAPGEF1-203ENST00000372195 BVES-AS1Q5T3Y7 98 aa19.03■□□□□ 0.64
RAPGEF1-203ENST00000372195 RLFQ13129 1914 aa19.03■□□□□ 0.64
RAPGEF1-203ENST00000372195 IGHV1OR15-1A0A075B7D0 117 aa19.03■□□□□ 0.64
RAPGEF1-203ENST00000372195 FXYD5Q96DB9 178 aa19.03■□□□□ 0.64
RAPGEF1-203ENST00000372195 TMEM141Q96I45 108 aa19.02■□□□□ 0.64
RAPGEF1-203ENST00000372195 MRPL35Q9NZE8 188 aaKnown RBP19.02■□□□□ 0.64
RAPGEF1-203ENST00000372195 ZDBF2Q9HCK1 2354 aa19.02■□□□□ 0.64
RAPGEF1-203ENST00000372195 FGF6P10767 208 aa19.02■□□□□ 0.64
RAPGEF1-203ENST00000372195 AKAP6Q13023 2319 aa19.02■□□□□ 0.64
RAPGEF1-203ENST00000372195 TCTEX1D4Q5JR98 221 aa19.02■□□□□ 0.64
RAPGEF1-203ENST00000372195 CEND1Q8N111 149 aa19.02■□□□□ 0.64
RAPGEF1-203ENST00000372195 SPRNQ5BIV9 151 aa19.02■□□□□ 0.63
RAPGEF1-203ENST00000372195 TRBV25-1A0A075B6N4 114 aa19.01■□□□□ 0.63
RAPGEF1-203ENST00000372195 SSC4DQ8WTU2 575 aa19.01■□□□□ 0.63
RAPGEF1-203ENST00000372195 DKK2Q9UBU2 259 aa19.01■□□□□ 0.63
RAPGEF1-203ENST00000372195 CEP250Q9BV73 2442 aa19.01■□□□□ 0.63
RAPGEF1-203ENST00000372195 COX8AP10176 69 aa19.01■□□□□ 0.63
RAPGEF1-203ENST00000372195 OVOL2Q9BRP0 275 aa19.01■□□□□ 0.63
RAPGEF1-203ENST00000372195 K7EP34 96 aa19.01■□□□□ 0.63
RAPGEF1-203ENST00000372195 TSC2P49815 1807 aa19.01■□□□□ 0.63
RAPGEF1-203ENST00000372195 K7EP13 123 aa19.01■□□□□ 0.63
RAPGEF1-203ENST00000372195 HLA-DRB4P13762 266 aa19.01■□□□□ 0.63
RAPGEF1-203ENST00000372195 HLA-DRB4X5D2U9 266 aa19.01■□□□□ 0.63
RAPGEF1-203ENST00000372195 F6UB75 175 aa19■□□□□ 0.63
RAPGEF1-203ENST00000372195 DNAJC30Q96LL9 226 aa19■□□□□ 0.63
RAPGEF1-203ENST00000372195 H3BMG7 143 aa19■□□□□ 0.63
RAPGEF1-203ENST00000372195 GATA4P43694 442 aa19■□□□□ 0.63
RAPGEF1-203ENST00000372195 DOCK9Q9BZ29 2069 aa19■□□□□ 0.63
RAPGEF1-203ENST00000372195 MGAMO43451 1857 aa19■□□□□ 0.63
RAPGEF1-203ENST00000372195 DAD1P61803 113 aa19■□□□□ 0.63
RAPGEF1-203ENST00000372195 RS1O15537 224 aa18.99■□□□□ 0.63
RAPGEF1-203ENST00000372195 ZNF561-AS1K7EIQ3 104 aa18.99■□□□□ 0.63
RAPGEF1-203ENST00000372195 ATP6V0BQ99437 205 aa18.99■□□□□ 0.63
RAPGEF1-203ENST00000372195 K7ENP7 123 aa18.98■□□□□ 0.63
RAPGEF1-203ENST00000372195 AMTNQ6UX39 209 aa18.98■□□□□ 0.63
RAPGEF1-203ENST00000372195 A0A1W2PPM0 123 aa18.98■□□□□ 0.63
RAPGEF1-203ENST00000372195 E9PQ18 207 aa18.98■□□□□ 0.63
RAPGEF1-203ENST00000372195 PLXNA4Q9HCM2 1894 aa18.98■□□□□ 0.63
RAPGEF1-203ENST00000372195 SPTA1P02549 2419 aa18.98■□□□□ 0.63
RAPGEF1-203ENST00000372195 PI4KAP42356 2102 aa18.98■□□□□ 0.63
RAPGEF1-203ENST00000372195 GNRH2O43555 120 aa18.98■□□□□ 0.63
RAPGEF1-203ENST00000372195 CT83Q5H943 113 aa18.98■□□□□ 0.63
RAPGEF1-203ENST00000372195 SUMO4Q6EEV6 95 aa18.98■□□□□ 0.63
RAPGEF1-203ENST00000372195 TRAV12-1A0A0B4J245 112 aa18.97■□□□□ 0.63
RAPGEF1-203ENST00000372195 KLF2Q9Y5W3 355 aaPredicted RBP18.97■□□□□ 0.63
RAPGEF1-203ENST00000372195 SOCS3O14543 225 aa18.96■□□□□ 0.63
RAPGEF1-203ENST00000372195 CDKN1BP46527 198 aa18.96■□□□□ 0.63
RAPGEF1-203ENST00000372195 TRAV25A0A0B4J276 109 aa18.96■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1512.5 ms