RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 IBA57Q5T440 356 aaKnown RBP17.42■□□□□ 0.38
SDF4-202ENST00000360001 FAM24BQ8N5W8 94 aa17.42■□□□□ 0.38
SDF4-202ENST00000360001 Q8TAT8 98 aa17.42■□□□□ 0.38
SDF4-202ENST00000360001 ID1P41134 155 aa17.41■□□□□ 0.38
SDF4-202ENST00000360001 ELOBQ15370 118 aa17.41■□□□□ 0.38
SDF4-202ENST00000360001 LINC00322Q6ZN03 302 aaPredicted RBP17.41■□□□□ 0.38
SDF4-202ENST00000360001 FAM231DQ6ZW35 169 aa17.41■□□□□ 0.38
SDF4-202ENST00000360001 V9GYV3 84 aa17.41■□□□□ 0.38
SDF4-202ENST00000360001 TENM1Q9UKZ4 2725 aa17.41■□□□□ 0.38
SDF4-202ENST00000360001 ZC2HC1AQ96GY0 325 aa17.4■□□□□ 0.38
SDF4-202ENST00000360001 PRR25Q96S07 402 aa17.4■□□□□ 0.38
SDF4-202ENST00000360001 AGPAT4-IT1Q9H0P7 198 aa17.4■□□□□ 0.38
SDF4-202ENST00000360001 PFN1P07737 140 aaKnown RBP17.4■□□□□ 0.38
SDF4-202ENST00000360001 DEFB114Q30KQ6 69 aa17.4■□□□□ 0.38
SDF4-202ENST00000360001 DYNLRB2Q8TF09 96 aa17.4■□□□□ 0.38
SDF4-202ENST00000360001 C8orf49Q96NF6 230 aa17.4■□□□□ 0.38
SDF4-202ENST00000360001 DEFB1P60022 68 aa17.39■□□□□ 0.37
SDF4-202ENST00000360001 C9orf47Q6ZRZ4 202 aa17.39■□□□□ 0.37
SDF4-202ENST00000360001 NUDT10Q8NFP7 164 aa17.39■□□□□ 0.37
SDF4-202ENST00000360001 NUDT11Q96G61 164 aa17.39■□□□□ 0.37
SDF4-202ENST00000360001 GPR61Q9BZJ8 451 aa17.39■□□□□ 0.37
SDF4-202ENST00000360001 BIN3Q9NQY0 253 aa17.39■□□□□ 0.37
SDF4-202ENST00000360001 SIGLEC8Q9NYZ4 499 aa17.39■□□□□ 0.37
SDF4-202ENST00000360001 ZNF492Q9P255 531 aa17.39■□□□□ 0.37
SDF4-202ENST00000360001 SAPCD1Q5SSQ6 148 aa17.39■□□□□ 0.37
SDF4-202ENST00000360001 TMEM61Q8N0U2 210 aa17.39■□□□□ 0.37
SDF4-202ENST00000360001 C19orf71A6NCJ1 209 aa17.38■□□□□ 0.37
SDF4-202ENST00000360001 ZNF705DP0CH99 300 aaPredicted RBP17.38■□□□□ 0.37
SDF4-202ENST00000360001 ZNF705BP0CI00 300 aaPredicted RBP17.38■□□□□ 0.37
SDF4-202ENST00000360001 PAFAH1B2P68402 229 aa17.38■□□□□ 0.37
SDF4-202ENST00000360001 COX8CQ7Z4L0 72 aa17.38■□□□□ 0.37
SDF4-202ENST00000360001 ATRQ13535 2644 aa17.37■□□□□ 0.37
SDF4-202ENST00000360001 ZNF688P0C7X2 276 aa17.37■□□□□ 0.37
SDF4-202ENST00000360001 TMEM78Q5T7P6 136 aa17.37■□□□□ 0.37
SDF4-202ENST00000360001 RBPMS2Q6ZRY4 209 aaKnown RBP17.37■□□□□ 0.37
SDF4-202ENST00000360001 IMMP2LQ96T52 175 aa17.37■□□□□ 0.37
SDF4-202ENST00000360001 F6UB75 175 aa17.36■□□□□ 0.37
SDF4-202ENST00000360001 CRIP1P50238 77 aa17.36■□□□□ 0.37
SDF4-202ENST00000360001 ZNF138P52744 262 aa17.36■□□□□ 0.37
SDF4-202ENST00000360001 SNRPD3P62318 126 aaKnown RBP17.36■□□□□ 0.37
SDF4-202ENST00000360001 CITED1Q99966 193 aa17.36■□□□□ 0.37
SDF4-202ENST00000360001 PPP1R14DQ9NXH3 145 aa17.36■□□□□ 0.37
SDF4-202ENST00000360001 TGIF2-C20orf24A0A0A6YYL0 155 aa17.35■□□□□ 0.37
SDF4-202ENST00000360001 NPIPB6E9PJ23 425 aa17.35■□□□□ 0.37
SDF4-202ENST00000360001 CXCL1P09341 107 aa17.35■□□□□ 0.37
SDF4-202ENST00000360001 CD300EQ496F6 205 aaPredicted RBP17.35■□□□□ 0.37
SDF4-202ENST00000360001 OR8A1Q8NGG7 326 aa17.35■□□□□ 0.37
SDF4-202ENST00000360001 OR10J6PQ8NGY7 276 aa17.35■□□□□ 0.37
SDF4-202ENST00000360001 IL36BQ9NZH7 164 aa17.35■□□□□ 0.37
SDF4-202ENST00000360001 TRAV2A0A0B4J234 112 aa17.35■□□□□ 0.37
SDF4-202ENST00000360001 ZNF705GA8MUZ8 300 aaPredicted RBP17.35■□□□□ 0.37
SDF4-202ENST00000360001 GATCO43716 136 aaKnown RBP17.35■□□□□ 0.37
SDF4-202ENST00000360001 S100PP25815 95 aa17.35■□□□□ 0.37
SDF4-202ENST00000360001 PSMG4Q5JS54 123 aa17.35■□□□□ 0.37
SDF4-202ENST00000360001 NDFIP1Q9BT67 221 aa17.35■□□□□ 0.37
SDF4-202ENST00000360001 KRTAP24-1Q3LI83 254 aa17.34■□□□□ 0.37
SDF4-202ENST00000360001 FAM3BP58499 235 aaPredicted RBP17.33■□□□□ 0.37
SDF4-202ENST00000360001 CA1P00915 261 aaPredicted RBP17.33■□□□□ 0.36
SDF4-202ENST00000360001 CT45A10P0DMU9 189 aa17.33■□□□□ 0.36
SDF4-202ENST00000360001 KCNIP4Q6PIL6 250 aa17.33■□□□□ 0.36
SDF4-202ENST00000360001 DAZAP1Q96EP5 407 aaKnown RBP17.33■□□□□ 0.36
SDF4-202ENST00000360001 LINC00477Q96M19 166 aa17.33■□□□□ 0.36
SDF4-202ENST00000360001 TRBV24-1A0A075B6N3 115 aa17.32■□□□□ 0.36
SDF4-202ENST00000360001 P01737 135 aa17.32■□□□□ 0.36
SDF4-202ENST00000360001 HIST1H1AQ02539 215 aaPredicted RBP17.32■□□□□ 0.36
SDF4-202ENST00000360001 PYGO2Q9BRQ0 406 aa17.32■□□□□ 0.36
SDF4-202ENST00000360001 SORL1Q92673 2214 aa17.32■□□□□ 0.36
SDF4-202ENST00000360001 ZNF80P51504 273 aaPredicted RBP17.31■□□□□ 0.36
SDF4-202ENST00000360001 SMUG1Q53HV7 270 aa17.31■□□□□ 0.36
SDF4-202ENST00000360001 LINC00482Q8N8I6 264 aa17.31■□□□□ 0.36
SDF4-202ENST00000360001 RPP21Q9H633 154 aaKnown RBP17.31■□□□□ 0.36
SDF4-202ENST00000360001 TRAV25A0A0B4J276 109 aa17.31■□□□□ 0.36
SDF4-202ENST00000360001 A0A1W2PPQ1 181 aa17.31■□□□□ 0.36
SDF4-202ENST00000360001 IZUMO1RA6ND01 250 aa17.31■□□□□ 0.36
SDF4-202ENST00000360001 PF4P02776 101 aa17.31■□□□□ 0.36
SDF4-202ENST00000360001 RAB5AP20339 215 aa17.31■□□□□ 0.36
SDF4-202ENST00000360001 PRIMA1Q86XR5 153 aa17.31■□□□□ 0.36
SDF4-202ENST00000360001 LENEPQ9Y5L5 61 aa17.31■□□□□ 0.36
SDF4-202ENST00000360001 GDF5OSQ5U4N7 250 aa17.3■□□□□ 0.36
SDF4-202ENST00000360001 SPAG8Q99932 426 aaPredicted RBP17.3■□□□□ 0.36
SDF4-202ENST00000360001 SAP30O75446 220 aa17.29■□□□□ 0.36
SDF4-202ENST00000360001 FAM162BQ5T6X4 162 aa17.29■□□□□ 0.36
SDF4-202ENST00000360001 FAM210BQ96KR6 192 aa17.29■□□□□ 0.36
SDF4-202ENST00000360001 TMA7Q9Y2S6 64 aaKnown RBP17.29■□□□□ 0.36
SDF4-202ENST00000360001 SMIM27A0A1W2PRY6 76 aa17.29■□□□□ 0.36
SDF4-202ENST00000360001 SH2D1AO60880 128 aa17.29■□□□□ 0.36
SDF4-202ENST00000360001 CT83Q5H943 113 aa17.29■□□□□ 0.36
SDF4-202ENST00000360001 ZNF256Q9Y2P7 627 aaPredicted RBP17.29■□□□□ 0.36
SDF4-202ENST00000360001 OR4B1Q8NGF8 309 aa17.28■□□□□ 0.36
SDF4-202ENST00000360001 FAM19A4Q96LR4 140 aa17.28■□□□□ 0.36
SDF4-202ENST00000360001 A0A0J9YX75 114 aa17.28■□□□□ 0.36
SDF4-202ENST00000360001 TCL1AP56279 114 aa17.28■□□□□ 0.36
SDF4-202ENST00000360001 TSKUQ8WUA8 353 aa17.28■□□□□ 0.36
SDF4-202ENST00000360001 OR4C46A6NHA9 309 aa17.27■□□□□ 0.36
SDF4-202ENST00000360001 CD33P20138 364 aa17.27■□□□□ 0.36
SDF4-202ENST00000360001 VWFP04275 2813 aa17.26■□□□□ 0.35
SDF4-202ENST00000360001 OR2D3Q8NGH3 330 aa17.26■□□□□ 0.35
SDF4-202ENST00000360001 FBN1P35555 2871 aaKnown RBP17.26■□□□□ 0.35
SDF4-202ENST00000360001 IGLV1-51P01701 117 aa17.26■□□□□ 0.35
SDF4-202ENST00000360001 DEFB131AP59861 70 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms