RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 AGPAT4-IT1Q9H0P7 198 aa12.18□□□□□ -0.46
NCL-202ENST00000356936 WFDC1Q9HC57 220 aa12.18□□□□□ -0.46
NCL-202ENST00000356936 TRAV12-3A0A0B4J271 114 aa12.17□□□□□ -0.46
NCL-202ENST00000356936 A0A1W2PPV4 95 aa12.17□□□□□ -0.46
NCL-202ENST00000356936 PHYHIPLQ96FC7 376 aa12.17□□□□□ -0.46
NCL-202ENST00000356936 C7orf71A4D174 169 aa12.16□□□□□ -0.46
NCL-202ENST00000356936 CBY3A6NI87 242 aa12.16□□□□□ -0.46
NCL-202ENST00000356936 KLLNB2CW77 178 aa12.16□□□□□ -0.46
NCL-202ENST00000356936 ATP5G1P05496 136 aa12.16□□□□□ -0.46
NCL-202ENST00000356936 ATP5G3P48201 142 aa12.16□□□□□ -0.46
NCL-202ENST00000356936 RANP62826 216 aaKnown RBP12.16□□□□□ -0.46
NCL-202ENST00000356936 PQLC2Q6ZP29 291 aa12.16□□□□□ -0.46
NCL-202ENST00000356936 POM121L12Q8N7R1 296 aa12.16□□□□□ -0.46
NCL-202ENST00000356936 INO80EQ8NBZ0 244 aaPredicted RBP12.16□□□□□ -0.46
NCL-202ENST00000356936 FAM19A4Q96LR4 140 aa12.16□□□□□ -0.46
NCL-202ENST00000356936 IGKV2-40A0A087WW87 121 aaPredicted RBP12.15□□□□□ -0.46
NCL-202ENST00000356936 TRBV7-9A0A0J9YWB2 115 aa12.15□□□□□ -0.46
NCL-202ENST00000356936 RBAKDNA6NC62 111 aa12.15□□□□□ -0.46
NCL-202ENST00000356936 SNURFLB1AK76 121 aa12.15□□□□□ -0.46
NCL-202ENST00000356936 IGKV2D-40P01614 121 aaPredicted RBP12.15□□□□□ -0.46
NCL-202ENST00000356936 GPX1P07203 203 aa12.15□□□□□ -0.46
NCL-202ENST00000356936 CRISP2P16562 243 aa12.15□□□□□ -0.46
NCL-202ENST00000356936 FAM74A1Q5RGS3 127 aa12.15□□□□□ -0.46
NCL-202ENST00000356936 TMEM88Q6PEY1 159 aa12.15□□□□□ -0.46
NCL-202ENST00000356936 C15orf53Q8NAA6 179 aa12.15□□□□□ -0.46
NCL-202ENST00000356936 RXFP4Q8TDU9 374 aa12.15□□□□□ -0.46
NCL-202ENST00000356936 ZNF503Q96F45 646 aa12.15□□□□□ -0.46
NCL-202ENST00000356936 Q9H3A6 140 aa12.15□□□□□ -0.46
NCL-202ENST00000356936 NOP10Q9NPE3 64 aaKnown RBP12.15□□□□□ -0.46
NCL-202ENST00000356936 RNASE4P34096 147 aaKnown RBP12.14□□□□□ -0.47
NCL-202ENST00000356936 ZNF138P52744 262 aa12.14□□□□□ -0.47
NCL-202ENST00000356936 ZNF680Q8NEM1 530 aa12.14□□□□□ -0.47
NCL-202ENST00000356936 OR10G4Q8NGN3 311 aa12.14□□□□□ -0.47
NCL-202ENST00000356936 OR10G9Q8NGN4 311 aa12.14□□□□□ -0.47
NCL-202ENST00000356936 OR10G7Q8NGN6 311 aa12.14□□□□□ -0.47
NCL-202ENST00000356936 VGLL1Q99990 258 aa12.14□□□□□ -0.47
NCL-202ENST00000356936 LINC00467Q9BRT7 94 aa12.14□□□□□ -0.47
NCL-202ENST00000356936 ZNF492Q9P255 531 aa12.14□□□□□ -0.47
NCL-202ENST00000356936 F5H768 121 aa12.13□□□□□ -0.47
NCL-202ENST00000356936 MBP02144 154 aa12.13□□□□□ -0.47
NCL-202ENST00000356936 UBE2DNLQ8IWF7 75 aa12.13□□□□□ -0.47
NCL-202ENST00000356936 HSD17B11Q8NBQ5 300 aa12.13□□□□□ -0.47
NCL-202ENST00000356936 OR2G3Q8NGZ4 309 aa12.13□□□□□ -0.47
NCL-202ENST00000356936 PSMG3Q9BT73 122 aaPredicted RBP12.13□□□□□ -0.47
NCL-202ENST00000356936 ZNF324O75467 553 aaPredicted RBP12.12□□□□□ -0.47
NCL-202ENST00000356936 RAB2AP61019 212 aa12.12□□□□□ -0.47
NCL-202ENST00000356936 SERF2P84101 59 aa12.12□□□□□ -0.47
NCL-202ENST00000356936 CD300CQ08708 224 aa12.12□□□□□ -0.47
NCL-202ENST00000356936 BTN1A1Q13410 526 aa12.12□□□□□ -0.47
NCL-202ENST00000356936 CMTM2Q8TAZ6 248 aa12.12□□□□□ -0.47
NCL-202ENST00000356936 OTORQ9NRC9 128 aa12.12□□□□□ -0.47
NCL-202ENST00000356936 BORCS7-ASMTA0A0B4J1R7 106 aa12.11□□□□□ -0.47
NCL-202ENST00000356936 CDC34P49427 236 aaPredicted RBP12.11□□□□□ -0.47
NCL-202ENST00000356936 DAZ2Q13117 558 aaKnown RBP12.11□□□□□ -0.47
NCL-202ENST00000356936 ANXA2RQ3ZCQ2 193 aa12.11□□□□□ -0.47
NCL-202ENST00000356936 RNF212Q495C1 297 aa12.11□□□□□ -0.47
NCL-202ENST00000356936 Q5BKY6 102 aa12.11□□□□□ -0.47
NCL-202ENST00000356936 EIF4E3Q8N5X7 224 aaKnown RBP12.11□□□□□ -0.47
NCL-202ENST00000356936 ZFAND2AQ8N6M9 145 aa12.11□□□□□ -0.47
NCL-202ENST00000356936 ARL6IP6Q8N6S5 226 aa12.11□□□□□ -0.47
NCL-202ENST00000356936 OR2T35Q8NGX2 323 aa12.11□□□□□ -0.47
NCL-202ENST00000356936 LENEPQ9Y5L5 61 aa12.11□□□□□ -0.47
NCL-202ENST00000356936 FXYD6-FXYD2A0A087WZ82 144 aa12.1□□□□□ -0.47
NCL-202ENST00000356936 DIRC3C9JPN6 131 aa12.1□□□□□ -0.47
NCL-202ENST00000356936 RGS13O14921 159 aa12.1□□□□□ -0.47
NCL-202ENST00000356936 LINC00612Q8N6U2 182 aa12.1□□□□□ -0.47
NCL-202ENST00000356936 GNPNAT1Q96EK6 184 aaPredicted RBP12.1□□□□□ -0.47
NCL-202ENST00000356936 HYLS1Q96M11 299 aa12.1□□□□□ -0.47
NCL-202ENST00000356936 PGPA6NDG6 321 aa12.09□□□□□ -0.47
NCL-202ENST00000356936 ATP6V0CP27449 155 aa12.09□□□□□ -0.47
NCL-202ENST00000356936 TMED6Q8WW62 240 aa12.09□□□□□ -0.47
NCL-202ENST00000356936 TNFSF18Q9UNG2 199 aa12.09□□□□□ -0.47
NCL-202ENST00000356936 GAGE12BA1L429 117 aa12.08□□□□□ -0.48
NCL-202ENST00000356936 GAGE7O76087 117 aa12.08□□□□□ -0.48
NCL-202ENST00000356936 GAGE12FP0CL80 117 aa12.08□□□□□ -0.48
NCL-202ENST00000356936 GAGE12GP0CL81 117 aa12.08□□□□□ -0.48
NCL-202ENST00000356936 GAGE12IP0CL82 117 aa12.08□□□□□ -0.48
NCL-202ENST00000356936 FAM3BP58499 235 aaPredicted RBP12.08□□□□□ -0.48
NCL-202ENST00000356936 Q8TAT8 98 aa12.08□□□□□ -0.48
NCL-202ENST00000356936 RNF222A6NCQ9 220 aa12.07□□□□□ -0.48
NCL-202ENST00000356936 HMGB3O15347 200 aaKnown RBP12.07□□□□□ -0.48
NCL-202ENST00000356936 EIF3GO75821 320 aaKnown RBP eCLIP12.07□□□□□ -0.48
NCL-202ENST00000356936 STAG3L2P0CL84 134 aa12.07□□□□□ -0.48
NCL-202ENST00000356936 STAG3L3P0CL85 134 aa12.07□□□□□ -0.48
NCL-202ENST00000356936 ARL14EPLP0DKL9 152 aa12.07□□□□□ -0.48
NCL-202ENST00000356936 IBA57Q5T440 356 aaKnown RBP12.07□□□□□ -0.48
NCL-202ENST00000356936 C11orf72Q8NBR9 251 aa12.07□□□□□ -0.48
NCL-202ENST00000356936 RAB24Q969Q5 203 aa12.07□□□□□ -0.48
NCL-202ENST00000356936 ARPC5LQ9BPX5 153 aa12.07□□□□□ -0.48
NCL-202ENST00000356936 ATG101Q9BSB4 218 aa12.07□□□□□ -0.48
NCL-202ENST00000356936 GSN-AS1Q9NRJ2 163 aa12.07□□□□□ -0.48
NCL-202ENST00000356936 IGHV1OR15-1A0A075B7D0 117 aa12.06□□□□□ -0.48
NCL-202ENST00000356936 NUDT3O95989 172 aa12.06□□□□□ -0.48
NCL-202ENST00000356936 TCL1AP56279 114 aa12.06□□□□□ -0.48
NCL-202ENST00000356936 PRR9Q5T870 116 aa12.06□□□□□ -0.48
NCL-202ENST00000356936 ACTR3CQ9C0K3 210 aaPredicted RBP12.06□□□□□ -0.48
NCL-202ENST00000356936 SH3BGRL3Q9H299 93 aa12.06□□□□□ -0.48
NCL-202ENST00000356936 RPH3ALQ9UNE2 315 aa12.06□□□□□ -0.48
NCL-202ENST00000356936 TRGV2A0A075B6R0 118 aa12.05□□□□□ -0.48
NCL-202ENST00000356936 SERTM2A0A1B0GWG4 89 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms