RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 C20orf173Q96LM9 149 aa17.28■□□□□ 0.36
SCAMP3-202ENST00000355379 CBLN1P23435 193 aa17.27■□□□□ 0.36
SCAMP3-202ENST00000355379 TCL1AP56279 114 aa17.27■□□□□ 0.36
SCAMP3-202ENST00000355379 ERCC8Q13216 396 aa17.27■□□□□ 0.36
SCAMP3-202ENST00000355379 KHDC1LQ5JSQ8 128 aa17.27■□□□□ 0.36
SCAMP3-202ENST00000355379 ZNF738Q8NE65 137 aa17.27■□□□□ 0.36
SCAMP3-202ENST00000355379 FRZBQ92765 325 aa17.27■□□□□ 0.36
SCAMP3-202ENST00000355379 ASCL2Q99929 193 aa17.27■□□□□ 0.36
SCAMP3-202ENST00000355379 AGPAT4-IT1Q9H0P7 198 aa17.27■□□□□ 0.36
SCAMP3-202ENST00000355379 S100A6P06703 90 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 ZNF138P52744 262 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 SLURP1P55000 103 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 DEFB136Q30KP8 78 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 SMUG1Q53HV7 270 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 TMEM78Q5T7P6 136 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 HIST1H2BKO60814 126 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 HIST1H2BJP06899 126 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 TRGC1P0CF51 173 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 HIST1H2BOP23527 126 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 HIST1H2BBP33778 126 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 ID1P41134 155 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 HIST1H2BDP58876 126 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 HIST1H2BCP62807 126 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 HIST2H2BEQ16778 126 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 FAM162BQ5T6X4 162 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 RASL11AQ6T310 242 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 NUP35Q8NFH5 326 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 Q8TAT8 98 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 HIST1H2BHQ93079 126 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 NEU1Q99519 415 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 HIST1H2BNQ99877 126 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 HIST1H2BMQ99879 126 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 PEMTQ9UBM1 199 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 TRAPPC1Q9Y5R8 145 aa17.26■□□□□ 0.35
SCAMP3-202ENST00000355379 M0QZ24 198 aa17.25■□□□□ 0.35
SCAMP3-202ENST00000355379 OR2D3Q8NGH3 330 aa17.25■□□□□ 0.35
SCAMP3-202ENST00000355379 DCANP1Q8TF63 244 aa17.25■□□□□ 0.35
SCAMP3-202ENST00000355379 GNB1LQ9BYB4 327 aa17.25■□□□□ 0.35
SCAMP3-202ENST00000355379 LENEPQ9Y5L5 61 aa17.25■□□□□ 0.35
SCAMP3-202ENST00000355379 C5orf52A6NGY3 159 aa17.24■□□□□ 0.35
SCAMP3-202ENST00000355379 INAFM1C9JVW0 142 aa17.24■□□□□ 0.35
SCAMP3-202ENST00000355379 CD28P10747 220 aa17.24■□□□□ 0.35
SCAMP3-202ENST00000355379 SRSF2Q01130 221 aaKnown RBP17.24■□□□□ 0.35
SCAMP3-202ENST00000355379 WDR73Q6P4I2 378 aa17.24■□□□□ 0.35
SCAMP3-202ENST00000355379 LINC00477Q96M19 166 aa17.24■□□□□ 0.35
SCAMP3-202ENST00000355379 GPR61Q9BZJ8 451 aa17.24■□□□□ 0.35
SCAMP3-202ENST00000355379 HIGD1CA8MV81 97 aa17.23■□□□□ 0.35
SCAMP3-202ENST00000355379 SH2D1AO60880 128 aa17.23■□□□□ 0.35
SCAMP3-202ENST00000355379 FOXA3P55318 350 aaPredicted RBP17.23■□□□□ 0.35
SCAMP3-202ENST00000355379 FABP9Q0Z7S8 132 aa17.23■□□□□ 0.35
SCAMP3-202ENST00000355379 TSSC4Q9Y5U2 329 aaPredicted RBP17.23■□□□□ 0.35
SCAMP3-202ENST00000355379 MT-ND6P03923 174 aa17.22■□□□□ 0.35
SCAMP3-202ENST00000355379 ATP5L2Q7Z4Y8 100 aa17.22■□□□□ 0.35
SCAMP3-202ENST00000355379 OR9G4Q8NGQ1 327 aa17.22■□□□□ 0.35
SCAMP3-202ENST00000355379 OR10J6PQ8NGY7 276 aa17.22■□□□□ 0.35
SCAMP3-202ENST00000355379 MS4A6AQ9H2W1 248 aa17.22■□□□□ 0.35
SCAMP3-202ENST00000355379 SAV1Q9H4B6 383 aaPredicted RBP17.22■□□□□ 0.35
SCAMP3-202ENST00000355379 IGKV3-7A0A075B6H7 116 aa17.21■□□□□ 0.35
SCAMP3-202ENST00000355379 TCF21O43680 179 aa17.21■□□□□ 0.35
SCAMP3-202ENST00000355379 SNRPEP62304 92 aaKnown RBP17.21■□□□□ 0.35
SCAMP3-202ENST00000355379 ADAMTSL5Q6ZMM2 481 aa17.21■□□□□ 0.35
SCAMP3-202ENST00000355379 RBPMS2Q6ZRY4 209 aaKnown RBP17.21■□□□□ 0.35
SCAMP3-202ENST00000355379 GTSF1Q8WW33 167 aa17.21■□□□□ 0.35
SCAMP3-202ENST00000355379 HIVEP2P31629 2446 aa17.21■□□□□ 0.35
SCAMP3-202ENST00000355379 FHL3Q13643 280 aa17.21■□□□□ 0.34
SCAMP3-202ENST00000355379 RNF114Q9Y508 228 aa17.21■□□□□ 0.34
SCAMP3-202ENST00000355379 FABP5P3A8MUU1 101 aa17.2■□□□□ 0.34
SCAMP3-202ENST00000355379 K7EQG2 157 aa17.2■□□□□ 0.34
SCAMP3-202ENST00000355379 SPINK4O60575 86 aa17.2■□□□□ 0.34
SCAMP3-202ENST00000355379 ZNF80P51504 273 aaPredicted RBP17.2■□□□□ 0.34
SCAMP3-202ENST00000355379 MRPL54Q6P161 138 aaKnown RBP17.2■□□□□ 0.34
SCAMP3-202ENST00000355379 XKRY2A2RUG3 117 aa17.19■□□□□ 0.34
SCAMP3-202ENST00000355379 TMEM189A5PLL7 270 aa17.19■□□□□ 0.34
SCAMP3-202ENST00000355379 SNURFLB1AK76 121 aa17.19■□□□□ 0.34
SCAMP3-202ENST00000355379 PROK1P58294 105 aa17.19■□□□□ 0.34
SCAMP3-202ENST00000355379 RPS20P60866 119 aaKnown RBP17.19■□□□□ 0.34
SCAMP3-202ENST00000355379 TMEM136Q6ZRR5 245 aa17.19■□□□□ 0.34
SCAMP3-202ENST00000355379 OR8A1Q8NGG7 326 aa17.19■□□□□ 0.34
SCAMP3-202ENST00000355379 DLX4Q92988 240 aaPredicted RBP17.19■□□□□ 0.34
SCAMP3-202ENST00000355379 RAX2Q96IS3 184 aa17.19■□□□□ 0.34
SCAMP3-202ENST00000355379 CITED2Q99967 270 aaPredicted RBP17.19■□□□□ 0.34
SCAMP3-202ENST00000355379 MRPL18Q9H0U6 180 aaKnown RBP17.19■□□□□ 0.34
SCAMP3-202ENST00000355379 TRBV7-9A0A0J9YWB2 115 aa17.18■□□□□ 0.34
SCAMP3-202ENST00000355379 UBE2CO00762 179 aa17.18■□□□□ 0.34
SCAMP3-202ENST00000355379 FRMD6-AS1P0C7T7 363 aa17.18■□□□□ 0.34
SCAMP3-202ENST00000355379 NDUFA6P56556 154 aa17.18■□□□□ 0.34
SCAMP3-202ENST00000355379 Q6AWC8 147 aa17.18■□□□□ 0.34
SCAMP3-202ENST00000355379 DUX3Q96PT4 197 aa17.18■□□□□ 0.34
SCAMP3-202ENST00000355379 OTOGQ6ZRI0 2925 aa17.18■□□□□ 0.34
SCAMP3-202ENST00000355379 A0A1B0GXF2 115 aa17.17■□□□□ 0.34
SCAMP3-202ENST00000355379 HAX1O00165 279 aa17.17■□□□□ 0.34
SCAMP3-202ENST00000355379 HLA-DQA1P01909 254 aa17.17■□□□□ 0.34
SCAMP3-202ENST00000355379 CSN3P07498 182 aa17.17■□□□□ 0.34
SCAMP3-202ENST00000355379 PAFAH1B2P68402 229 aa17.17■□□□□ 0.34
SCAMP3-202ENST00000355379 HIST1H1AQ02539 215 aaPredicted RBP17.17■□□□□ 0.34
SCAMP3-202ENST00000355379 WFDC3Q8IUB2 231 aa17.17■□□□□ 0.34
SCAMP3-202ENST00000355379 SELENOKQ9Y6D0 94 aa17.17■□□□□ 0.34
SCAMP3-202ENST00000355379 TRAV2A0A0B4J234 112 aa17.16■□□□□ 0.34
SCAMP3-202ENST00000355379 CCL24O00175 119 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms