RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 IGHV3OR16-10A0A075B7F0 116 aa17.14■□□□□ 0.33
NKX2-1-201ENST00000354822 TRAV40A0A0B4J280 105 aa17.14■□□□□ 0.33
NKX2-1-201ENST00000354822 D6R8Y8 96 aa17.14■□□□□ 0.33
NKX2-1-201ENST00000354822 ORM1P02763 201 aa17.14■□□□□ 0.33
NKX2-1-201ENST00000354822 TWIST1Q15672 202 aa17.14■□□□□ 0.33
NKX2-1-201ENST00000354822 COL5A1-AS1Q5SY13 56 aa17.14■□□□□ 0.33
NKX2-1-201ENST00000354822 PRELID3AQ96N28 172 aa17.14■□□□□ 0.33
NKX2-1-201ENST00000354822 ST20Q9HBF5 79 aa17.14■□□□□ 0.33
NKX2-1-201ENST00000354822 PRAC2D3DTV9 90 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 BRI3O95415 125 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 IGF1P05019 195 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 ERCC8Q13216 396 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 AMN1Q8IY45 258 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 CNFNQ9BYD5 112 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 IGHV3-66A0A0C4DH42 116 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 TSPOP30536 169 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 LINC01559Q495D7 138 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 BRD3OSQ6XYD6 125 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 SPOCK3Q9BQ16 436 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 LAMTOR2Q9Y2Q5 125 aa17.13■□□□□ 0.33
NKX2-1-201ENST00000354822 TRGV3P03979 118 aa17.12■□□□□ 0.33
NKX2-1-201ENST00000354822 BATFQ16520 125 aa17.12■□□□□ 0.33
NKX2-1-201ENST00000354822 RNF182Q8N6D2 247 aa17.12■□□□□ 0.33
NKX2-1-201ENST00000354822 HIST1H1AQ02539 215 aaPredicted RBP17.12■□□□□ 0.33
NKX2-1-201ENST00000354822 MRPL51Q4U2R6 128 aaKnown RBP17.12■□□□□ 0.33
NKX2-1-201ENST00000354822 H3BUA1 57 aa17.11■□□□□ 0.33
NKX2-1-201ENST00000354822 ATP5J2P56134 94 aa17.11■□□□□ 0.33
NKX2-1-201ENST00000354822 ZNF575Q86XF7 245 aa17.11■□□□□ 0.33
NKX2-1-201ENST00000354822 CSMD1Q96PZ7 3565 aa17.11■□□□□ 0.33
NKX2-1-201ENST00000354822 HSBP1L1C9JCN9 74 aa17.11■□□□□ 0.33
NKX2-1-201ENST00000354822 IFI27P40305 119 aaPredicted RBP17.11■□□□□ 0.33
NKX2-1-201ENST00000354822 TMEM78Q5T7P6 136 aa17.11■□□□□ 0.33
NKX2-1-201ENST00000354822 C8orf86Q6ZUL3 223 aa17.11■□□□□ 0.33
NKX2-1-201ENST00000354822 AGPAT4-IT1Q9H0P7 198 aa17.11■□□□□ 0.33
NKX2-1-201ENST00000354822 PPP1R14DQ9NXH3 145 aa17.11■□□□□ 0.33
NKX2-1-201ENST00000354822 TRAV8-2A0A0B4J237 113 aa17.1■□□□□ 0.33
NKX2-1-201ENST00000354822 USMG5Q96IX5 58 aa17.1■□□□□ 0.33
NKX2-1-201ENST00000354822 ZNF747Q9BV97 191 aa17.1■□□□□ 0.33
NKX2-1-201ENST00000354822 SIGLEC8Q9NYZ4 499 aa17.1■□□□□ 0.33
NKX2-1-201ENST00000354822 IGHV3OR16-13A0A075B7E8 117 aa17.09■□□□□ 0.33
NKX2-1-201ENST00000354822 IGHV3-74A0A0B4J1X5 117 aa17.09■□□□□ 0.33
NKX2-1-201ENST00000354822 CKS2P33552 79 aa17.09■□□□□ 0.33
NKX2-1-201ENST00000354822 ARL3P36405 182 aa17.09■□□□□ 0.33
NKX2-1-201ENST00000354822 AKAP6Q13023 2319 aa17.09■□□□□ 0.33
NKX2-1-201ENST00000354822 ZNF207O43670 478 aaKnown RBP17.09■□□□□ 0.33
NKX2-1-201ENST00000354822 IGHG2P01859 326 aa17.09■□□□□ 0.33
NKX2-1-201ENST00000354822 C9orf47Q6ZRZ4 202 aa17.09■□□□□ 0.33
NKX2-1-201ENST00000354822 IL17RELQ6ZVW7 336 aa17.09■□□□□ 0.33
NKX2-1-201ENST00000354822 PPBPP02775 128 aa17.08■□□□□ 0.33
NKX2-1-201ENST00000354822 LINC01545Q5VT33 79 aa17.08■□□□□ 0.33
NKX2-1-201ENST00000354822 PSMG3-AS1Q96PY0 264 aa17.08■□□□□ 0.33
NKX2-1-201ENST00000354822 LINC00527Q9UJ94 153 aa17.08■□□□□ 0.33
NKX2-1-201ENST00000354822 IGHV4-38-2P0DP08 117 aa17.08■□□□□ 0.32
NKX2-1-201ENST00000354822 IGHV3-49A0A0A0MS15 119 aa17.07■□□□□ 0.32
NKX2-1-201ENST00000354822 MUC21A0A0G2JKD1 596 aa17.07■□□□□ 0.32
NKX2-1-201ENST00000354822 MUC21A0A140T8X8 626 aa17.07■□□□□ 0.32
NKX2-1-201ENST00000354822 A6NDX4 124 aa17.07■□□□□ 0.32
NKX2-1-201ENST00000354822 NDUFA4O00483 81 aa17.07■□□□□ 0.32
NKX2-1-201ENST00000354822 MSMBP08118 114 aa17.07■□□□□ 0.32
NKX2-1-201ENST00000354822 MUC21Q5SSG8 566 aa17.07■□□□□ 0.32
NKX2-1-201ENST00000354822 MS4A6AQ9H2W1 248 aa17.07■□□□□ 0.32
NKX2-1-201ENST00000354822 ASH1LQ9NR48 2969 aaKnown RBP17.07■□□□□ 0.32
NKX2-1-201ENST00000354822 LOC389332A0A1B0GUA5 103 aa17.06■□□□□ 0.32
NKX2-1-201ENST00000354822 ZNF25P17030 456 aaPredicted RBP17.06■□□□□ 0.32
NKX2-1-201ENST00000354822 PPIFP30405 207 aaKnown RBP17.06■□□□□ 0.32
NKX2-1-201ENST00000354822 GLMPQ8WWB7 406 aa17.06■□□□□ 0.32
NKX2-1-201ENST00000354822 IGHV4-30-2A0A087WSY4 118 aa17.06■□□□□ 0.32
NKX2-1-201ENST00000354822 C9orf139Q6ZV77 190 aa17.06■□□□□ 0.32
NKX2-1-201ENST00000354822 C16orf92Q96LL3 132 aa17.06■□□□□ 0.32
NKX2-1-201ENST00000354822 TIMM8BQ9Y5J9 83 aaPredicted RBP17.05■□□□□ 0.32
NKX2-1-201ENST00000354822 H3BUX3 64 aa17.05■□□□□ 0.32
NKX2-1-201ENST00000354822 PRB1P04280 392 aa17.05■□□□□ 0.32
NKX2-1-201ENST00000354822 LENEPQ9Y5L5 61 aa17.05■□□□□ 0.32
NKX2-1-201ENST00000354822 LY6EQ16553 131 aa17.04■□□□□ 0.32
NKX2-1-201ENST00000354822 DSCR9P59020 149 aa17.04■□□□□ 0.32
NKX2-1-201ENST00000354822 IGSF10Q6WRI0 2623 aa17.03■□□□□ 0.32
NKX2-1-201ENST00000354822 IGKV3D-20A0A0C4DH25 116 aa17.03■□□□□ 0.32
NKX2-1-201ENST00000354822 hDV102S1A0JD36 115 aa17.03■□□□□ 0.32
NKX2-1-201ENST00000354822 TCF21O43680 179 aa17.03■□□□□ 0.32
NKX2-1-201ENST00000354822 G0S2P27469 103 aa17.03■□□□□ 0.32
NKX2-1-201ENST00000354822 GAGE1Q13065 139 aa17.03■□□□□ 0.32
NKX2-1-201ENST00000354822 CACNA1BQ00975 2339 aa17.03■□□□□ 0.32
NKX2-1-201ENST00000354822 ACACBO00763 2458 aa17.03■□□□□ 0.32
NKX2-1-201ENST00000354822 ABCA2Q9BZC7 2435 aa17.03■□□□□ 0.32
NKX2-1-201ENST00000354822 B4DSR2 109 aa17.02■□□□□ 0.32
NKX2-1-201ENST00000354822 FAM106AQ4KMX7 169 aa17.02■□□□□ 0.32
NKX2-1-201ENST00000354822 RNF185Q96GF1 192 aa17.02■□□□□ 0.32
NKX2-1-201ENST00000354822 BBC3Q96PG8 261 aaPredicted RBP17.02■□□□□ 0.32
NKX2-1-201ENST00000354822 NPFFR1Q9GZQ6 430 aa17.02■□□□□ 0.32
NKX2-1-201ENST00000354822 A0A096LNJ9 63 aa17.02■□□□□ 0.31
NKX2-1-201ENST00000354822 H0Y8G0 127 aa17.02■□□□□ 0.31
NKX2-1-201ENST00000354822 NPYP01303 97 aa17.02■□□□□ 0.31
NKX2-1-201ENST00000354822 HBDP02042 147 aa17.02■□□□□ 0.31
NKX2-1-201ENST00000354822 GATA3P23771 443 aa17.02■□□□□ 0.31
NKX2-1-201ENST00000354822 STPG4Q8N801 248 aa17.02■□□□□ 0.31
NKX2-1-201ENST00000354822 TMEM208Q9BTX3 173 aa17.02■□□□□ 0.31
NKX2-1-201ENST00000354822 MSRB1Q9NZV6 116 aa17.02■□□□□ 0.31
NKX2-1-201ENST00000354822 SLC25A34Q6PIV7 304 aa17.01■□□□□ 0.31
NKX2-1-201ENST00000354822 MAP1LC3AQ9H492 121 aa17.01■□□□□ 0.31
NKX2-1-201ENST00000354822 SVEP1Q4LDE5 3571 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms