RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 RAB32Q13637 225 aa9.98□□□□□ -0.81
PRPF40A-201ENST00000354363 MAPKAPK5-AS1Q8N8E1 139 aa9.98□□□□□ -0.81
PRPF40A-201ENST00000354363 VSIG2Q96IQ7 327 aa9.98□□□□□ -0.81
PRPF40A-201ENST00000354363 FAM19A4Q96LR4 140 aa9.98□□□□□ -0.81
PRPF40A-201ENST00000354363 GSN-AS1Q9NRJ2 163 aa9.98□□□□□ -0.81
PRPF40A-201ENST00000354363 PRELID1Q9Y255 219 aa9.98□□□□□ -0.81
PRPF40A-201ENST00000354363 ZNF324O75467 553 aaPredicted RBP9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 PYYP10082 97 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 HBG1P69891 147 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 HBG2P69892 147 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 CD300CQ08708 224 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 BTN1A1Q13410 526 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 PDE6HQ13956 83 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 STX12Q86Y82 276 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 ZNF680Q8NEM1 530 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 LINC00477Q96M19 166 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 C18orf15Q96N68 181 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 LINC00467Q9BRT7 94 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 AGPAT4-IT1Q9H0P7 198 aa9.97□□□□□ -0.81
PRPF40A-201ENST00000354363 TRGV2A0A075B6R0 118 aa9.96□□□□□ -0.81
PRPF40A-201ENST00000354363 A0A096LPF7 62 aa9.96□□□□□ -0.81
PRPF40A-201ENST00000354363 H2AFB2P0C5Z0 115 aa9.96□□□□□ -0.81
PRPF40A-201ENST00000354363 ATP6V1FQ16864 119 aa9.96□□□□□ -0.81
PRPF40A-201ENST00000354363 ANXA2RQ3ZCQ2 193 aa9.96□□□□□ -0.81
PRPF40A-201ENST00000354363 EXOC3-AS1Q8N2X6 119 aa9.96□□□□□ -0.81
PRPF40A-201ENST00000354363 TIMM9Q9Y5J7 89 aa9.96□□□□□ -0.81
PRPF40A-201ENST00000354363 TRGV1A0A0A0MS02 117 aa9.96□□□□□ -0.82
PRPF40A-201ENST00000354363 BTF3P20290 206 aaKnown RBP9.96□□□□□ -0.82
PRPF40A-201ENST00000354363 RNASE4P34096 147 aaKnown RBP9.96□□□□□ -0.82
PRPF40A-201ENST00000354363 GCSAMLQ5JQS6 135 aa9.96□□□□□ -0.82
PRPF40A-201ENST00000354363 EIF4E3Q8N5X7 224 aaKnown RBP9.96□□□□□ -0.82
PRPF40A-201ENST00000354363 BLNKQ8WV28 456 aa9.96□□□□□ -0.82
PRPF40A-201ENST00000354363 GPN1Q9HCN4 374 aaPredicted RBP9.96□□□□□ -0.82
PRPF40A-201ENST00000354363 MPDU1O75352 247 aa9.95□□□□□ -0.82
PRPF40A-201ENST00000354363 CRISP2P16562 243 aa9.95□□□□□ -0.82
PRPF40A-201ENST00000354363 KRTAP10-2P60368 255 aa9.95□□□□□ -0.82
PRPF40A-201ENST00000354363 C9orf47Q6ZRZ4 202 aa9.95□□□□□ -0.82
PRPF40A-201ENST00000354363 SLC25A2Q9BXI2 301 aa9.95□□□□□ -0.82
PRPF40A-201ENST00000354363 NPCDR1Q9BY65 106 aa9.95□□□□□ -0.82
PRPF40A-201ENST00000354363 FUT9Q9Y231 359 aa9.95□□□□□ -0.82
PRPF40A-201ENST00000354363 KLF12Q9Y4X4 402 aa9.95□□□□□ -0.82
PRPF40A-201ENST00000354363 SPINK4O60575 86 aa9.94□□□□□ -0.82
PRPF40A-201ENST00000354363 TCL1AP56279 114 aa9.94□□□□□ -0.82
PRPF40A-201ENST00000354363 ICAM4Q14773 271 aa9.94□□□□□ -0.82
PRPF40A-201ENST00000354363 AAMDCQ9H7C9 122 aa9.94□□□□□ -0.82
PRPF40A-201ENST00000354363 IGKV2-40A0A087WW87 121 aaPredicted RBP9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 IGKV2D-40P01614 121 aaPredicted RBP9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 GPX1P07203 203 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 NMBP08949 121 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 PRR9Q5T870 116 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 Q8N1X5 172 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 ZFAND2AQ8N6M9 145 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 FAM167A-AS1Q96KT0 104 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 VGLL1Q99990 258 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 CCDC32Q9BV29 185 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 TP53TG3Q9ULZ0 132 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 FAM240BA0A1B0GVZ2 78 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 LINC00315P59091 139 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 NHLH2Q02577 135 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 IBA57Q5T440 356 aaKnown RBP9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 FAM122CQ6P4D5 195 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 Q6ZQT7 251 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 MIR17HGQ75NE6 70 aa9.93□□□□□ -0.82
PRPF40A-201ENST00000354363 RGS13O14921 159 aa9.92□□□□□ -0.82
PRPF40A-201ENST00000354363 NBEAP1P0C6P0 100 aa9.92□□□□□ -0.82
PRPF40A-201ENST00000354363 TMEM78Q5T7P6 136 aa9.92□□□□□ -0.82
PRPF40A-201ENST00000354363 THAP6Q8TBB0 222 aa9.92□□□□□ -0.82
PRPF40A-201ENST00000354363 ST6GAL2Q96JF0 529 aa9.92□□□□□ -0.82
PRPF40A-201ENST00000354363 ZNF492Q9P255 531 aa9.92□□□□□ -0.82
PRPF40A-201ENST00000354363 IGHV1OR15-1A0A075B7D0 117 aa9.91□□□□□ -0.82
PRPF40A-201ENST00000354363 SIVA1O15304 175 aa9.91□□□□□ -0.82
PRPF40A-201ENST00000354363 PAX4O43316 350 aa9.91□□□□□ -0.82
PRPF40A-201ENST00000354363 IGHV3-53P01767 116 aa9.91□□□□□ -0.82
PRPF40A-201ENST00000354363 Q6ZRN7 208 aaPredicted RBP9.91□□□□□ -0.82
PRPF40A-201ENST00000354363 OR5C1Q8NGR4 320 aa9.91□□□□□ -0.82
PRPF40A-201ENST00000354363 OR51M1Q9H341 326 aa9.91□□□□□ -0.82
PRPF40A-201ENST00000354363 MRPL16Q9NX20 251 aaKnown RBP9.91□□□□□ -0.82
PRPF40A-201ENST00000354363 ICOSQ9Y6W8 199 aa9.91□□□□□ -0.82
PRPF40A-201ENST00000354363 NDUFA13Q9P0J0 144 aa9.9□□□□□ -0.82
PRPF40A-201ENST00000354363 NXPH4O95158 308 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 SIX6O95475 246 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 OR10J4P0C629 311 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 MZT2BQ6NZ67 158 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 FXYD5Q96DB9 178 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 ARPC5LQ9BPX5 153 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 PAXXQ9BUH6 204 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 MRPL32Q9BYC8 188 aaKnown RBP9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 SLC25A31Q9H0C2 315 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 SCRT2Q9NQ03 307 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 PRO0255Q9UI72 69 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 E5RGE8 158 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 ZNF138P52744 262 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 Q8TAT8 98 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 PHYHIPLQ96FC7 376 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 OR5AC2Q9NZP5 309 aa9.89□□□□□ -0.83
PRPF40A-201ENST00000354363 TRBV7-9A0A0J9YWB2 115 aa9.88□□□□□ -0.83
PRPF40A-201ENST00000354363 CRYBA4P53673 196 aa9.88□□□□□ -0.83
PRPF40A-201ENST00000354363 ZNF415Q09FC8 603 aa9.88□□□□□ -0.83
PRPF40A-201ENST00000354363 SLAQ13239 276 aa9.88□□□□□ -0.83
PRPF40A-201ENST00000354363 ASAH1Q13510 395 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms