RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 IGLC1P0CG04 106 aa12.75□□□□□ -0.37
PTPN11-201ENST00000351677 CKS1BP61024 79 aa12.75□□□□□ -0.37
PTPN11-201ENST00000351677 TMEM86BQ8N661 226 aa12.74□□□□□ -0.37
PTPN11-201ENST00000351677 IGFBPL1Q8WX77 278 aa12.74□□□□□ -0.37
PTPN11-201ENST00000351677 IGHV2-5P01817 119 aa12.74□□□□□ -0.37
PTPN11-201ENST00000351677 MRPL51Q4U2R6 128 aaKnown RBP12.74□□□□□ -0.37
PTPN11-201ENST00000351677 RNF138Q8WVD3 245 aa12.74□□□□□ -0.37
PTPN11-201ENST00000351677 ESDP10768 282 aa12.74□□□□□ -0.37
PTPN11-201ENST00000351677 ZC2HC1AQ96GY0 325 aa12.74□□□□□ -0.37
PTPN11-201ENST00000351677 SIGMAR1Q99720 223 aa12.74□□□□□ -0.37
PTPN11-201ENST00000351677 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.74□□□□□ -0.37
PTPN11-201ENST00000351677 CTSZQ9UBR2 303 aa12.74□□□□□ -0.37
PTPN11-201ENST00000351677 ARFGEF3Q5TH69 2177 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 FAM231DQ6ZW35 169 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 THAP8Q8NA92 274 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 PRR20EP86478 221 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 PRR20CP86479 221 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 PRR20DP86480 221 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 PRR20BP86481 221 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 PRR20AP86496 221 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 PRSS57Q6UWY2 283 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 TMEM14CQ9P0S9 112 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 GRNP28799 593 aaKnown RBP12.73□□□□□ -0.37
PTPN11-201ENST00000351677 K7EN84 100 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 SSC4DQ8WTU2 575 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 XCL2Q9UBD3 114 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 TP53TG1Q9Y2A0 90 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 PAX4O43316 350 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 UBE2V1Q13404 147 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 ATXN8Q156A1 80 aa12.73□□□□□ -0.37
PTPN11-201ENST00000351677 IGHV1-24A0A0C4DH33 117 aa12.72□□□□□ -0.37
PTPN11-201ENST00000351677 C17orf77Q96MU5 243 aa12.72□□□□□ -0.37
PTPN11-201ENST00000351677 RASL10AQ92737 203 aa12.72□□□□□ -0.37
PTPN11-201ENST00000351677 C20orf144Q9BQM9 153 aa12.72□□□□□ -0.37
PTPN11-201ENST00000351677 DTX2Q86UW9 622 aa12.72□□□□□ -0.37
PTPN11-201ENST00000351677 VGLL1Q99990 258 aa12.72□□□□□ -0.37
PTPN11-201ENST00000351677 TIMM21Q9BVV7 248 aa12.72□□□□□ -0.37
PTPN11-201ENST00000351677 TRAV12-2A0A075B6T6 113 aa12.72□□□□□ -0.37
PTPN11-201ENST00000351677 C22orf46C9J442 243 aa12.72□□□□□ -0.37
PTPN11-201ENST00000351677 GATD1Q8NB37 220 aa12.72□□□□□ -0.37
PTPN11-201ENST00000351677 Q5PR19 223 aa12.71□□□□□ -0.37
PTPN11-201ENST00000351677 S100A7L2Q5SY68 101 aa12.71□□□□□ -0.37
PTPN11-201ENST00000351677 IGHV3-16A0A0C4DH30 117 aa12.71□□□□□ -0.37
PTPN11-201ENST00000351677 SHISA9B4DS77 424 aa12.71□□□□□ -0.37
PTPN11-201ENST00000351677 DEFB130BP0DP73 79 aa12.71□□□□□ -0.37
PTPN11-201ENST00000351677 DEFB130AP0DP74 79 aa12.71□□□□□ -0.37
PTPN11-201ENST00000351677 C11orf52Q96A22 123 aa12.71□□□□□ -0.37
PTPN11-201ENST00000351677 NDUFS7O75251 213 aa12.71□□□□□ -0.37
PTPN11-201ENST00000351677 POU2AF1Q16633 256 aa12.71□□□□□ -0.37
PTPN11-201ENST00000351677 TRPT1Q86TN4 253 aaKnown RBP12.71□□□□□ -0.37
PTPN11-201ENST00000351677 NOTCH3Q9UM47 2321 aa12.71□□□□□ -0.37
PTPN11-201ENST00000351677 MED13LQ71F56 2210 aa12.71□□□□□ -0.38
PTPN11-201ENST00000351677 ANXA2RQ3ZCQ2 193 aa12.71□□□□□ -0.38
PTPN11-201ENST00000351677 KRTAP27-1Q3LI81 207 aa12.71□□□□□ -0.38
PTPN11-201ENST00000351677 SNHG12Q9BXW3 62 aa12.71□□□□□ -0.38
PTPN11-201ENST00000351677 KAAG1Q9UBP8 84 aa12.71□□□□□ -0.38
PTPN11-201ENST00000351677 CD5LO43866 347 aa12.7□□□□□ -0.38
PTPN11-201ENST00000351677 GATA3P23771 443 aa12.7□□□□□ -0.38
PTPN11-201ENST00000351677 C2orf66Q6UXQ4 117 aa12.7□□□□□ -0.38
PTPN11-201ENST00000351677 LYPD6BQ8NI32 183 aa12.7□□□□□ -0.38
PTPN11-201ENST00000351677 Q8N8P6 123 aa12.7□□□□□ -0.38
PTPN11-201ENST00000351677 CFHR3Q02985 330 aa12.7□□□□□ -0.38
PTPN11-201ENST00000351677 ZGRF1Q86YA3 2104 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 MALRD1Q5VYJ5 2156 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 NEGR1Q7Z3B1 354 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 LYPD6Q86Y78 171 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 LY6G5BQ8NDX9 201 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 COX11Q9Y6N1 276 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 IGLC7A0M8Q6 106 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 HLA-DMBP28068 263 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 Q96MF0 132 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.69□□□□□ -0.381e-13■■■■□ 25.4
PTPN11-201ENST00000351677 MRPL52Q86TS9 123 aaKnown RBP12.69□□□□□ -0.38
PTPN11-201ENST00000351677 ZNF491Q8N8L2 437 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 DLX4Q92988 240 aaPredicted RBP12.69□□□□□ -0.38
PTPN11-201ENST00000351677 NDUFA4O00483 81 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 C1QTNF4Q9BXJ3 329 aa12.69□□□□□ -0.38
PTPN11-201ENST00000351677 SIGLEC8Q9NYZ4 499 aa12.68□□□□□ -0.38
PTPN11-201ENST00000351677 LINC01619G3V211 115 aa12.68□□□□□ -0.38
PTPN11-201ENST00000351677 PRSS33Q8NF86 280 aa12.68□□□□□ -0.38
PTPN11-201ENST00000351677 C6orf226Q5I0X4 101 aa12.68□□□□□ -0.38
PTPN11-201ENST00000351677 IGHV2-70P01814 119 aa12.68□□□□□ -0.38
PTPN11-201ENST00000351677 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
PTPN11-201ENST00000351677 NPYP01303 97 aa12.68□□□□□ -0.38
PTPN11-201ENST00000351677 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
PTPN11-201ENST00000351677 COL4A3Q01955 1670 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 GAGE12BA1L429 117 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 IGLC2P0DOY2 106 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 IGLC3P0DOY3 106 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 PRIMA1Q86XR5 153 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 ANAPC13Q9BS18 74 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 VWC2Q2TAL6 325 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 JPT2Q9H910 190 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 PLA2G2EQ9NZK7 142 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 LHBP01229 141 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 MYMXA0A1B0GTQ4 84 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 IGLL1P15814 213 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 TCTEX1D4Q5JR98 221 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 PCNX2A6NKB5 2137 aa12.67□□□□□ -0.38
PTPN11-201ENST00000351677 SRCAPQ6ZRS2 3230 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms