RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TRACP01848 142 aa14.44□□□□□ -0.1
SMC4-201ENST00000344722 ZNF134P52741 427 aa14.44□□□□□ -0.1
SMC4-201ENST00000344722 MED12Q93074 2177 aa14.44□□□□□ -0.1
SMC4-201ENST00000344722 ANKRD39Q53RE8 183 aa14.44□□□□□ -0.1
SMC4-201ENST00000344722 C11orf1Q9H5F2 150 aa14.44□□□□□ -0.1
SMC4-201ENST00000344722 TRAV26-2A0A0B4J265 109 aa14.44□□□□□ -0.1
SMC4-201ENST00000344722 PROK2Q9HC23 129 aa14.44□□□□□ -0.1
SMC4-201ENST00000344722 GATA4P43694 442 aa14.43□□□□□ -0.1
SMC4-201ENST00000344722 ZNF672Q499Z4 452 aaPredicted RBP14.43□□□□□ -0.1
SMC4-201ENST00000344722 CCL19Q99731 98 aa14.43□□□□□ -0.1
SMC4-201ENST00000344722 PRDM6Q9NQX0 595 aa14.43□□□□□ -0.1
SMC4-201ENST00000344722 PRIMA1Q86XR5 153 aa14.43□□□□□ -0.1
SMC4-201ENST00000344722 C20orf78Q9BR46 151 aa14.43□□□□□ -0.1
SMC4-201ENST00000344722 IGHV3-73A0A0B4J1V6 119 aa14.43□□□□□ -0.1
SMC4-201ENST00000344722 NTN5Q8WTR8 489 aaPredicted RBP14.43□□□□□ -0.1
SMC4-201ENST00000344722 FAM223BA6NKX1 122 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 KLRD1Q13241 179 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 Q6ZR03 302 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 STHQ8IWL8 128 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 FAM223AQ8IWN6 122 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 HIGD1BQ9P298 99 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 KIAA2026Q5HYC2 2103 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 LYPD2Q6UXB3 125 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 Q8TCH9 128 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 ZNF415Q09FC8 603 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 CARD19Q96LW7 228 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 EFNA4P52798 201 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 LINC00311Q8N616 119 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 SOCS3O14543 225 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 IGHG4P01861 327 aa14.42□□□□□ -0.1
SMC4-201ENST00000344722 ZNF503-AS2A6NEH8 195 aa14.41□□□□□ -0.1
SMC4-201ENST00000344722 RPL36AP83881 106 aaKnown RBP14.41□□□□□ -0.1
SMC4-201ENST00000344722 RPL36ALQ969Q0 106 aaKnown RBP14.41□□□□□ -0.1
SMC4-201ENST00000344722 C7orf69Q9H7B7 122 aa14.41□□□□□ -0.1
SMC4-201ENST00000344722 RTTNQ86VV8 2226 aa14.41□□□□□ -0.1
SMC4-201ENST00000344722 IGHG3P01860 377 aa14.41□□□□□ -0.1
SMC4-201ENST00000344722 MORN5Q5VZ52 161 aa14.41□□□□□ -0.1
SMC4-201ENST00000344722 MBD3L4A6NDZ8 208 aaPredicted RBP14.41□□□□□ -0.1
SMC4-201ENST00000344722 MBD3L3A6NE82 208 aaPredicted RBP14.41□□□□□ -0.1
SMC4-201ENST00000344722 MBD3L5A6NJ08 208 aaPredicted RBP14.41□□□□□ -0.1
SMC4-201ENST00000344722 J3QQQ9 107 aa14.41□□□□□ -0.1
SMC4-201ENST00000344722 MBD3L2Q8NHZ7 208 aaPredicted RBP14.41□□□□□ -0.1
SMC4-201ENST00000344722 K7EMI3 77 aa14.4□□□□□ -0.1
SMC4-201ENST00000344722 LAMTOR3Q9UHA4 124 aa14.4□□□□□ -0.1
SMC4-201ENST00000344722 ANKRD29Q8N6D5 301 aa14.4□□□□□ -0.1
SMC4-201ENST00000344722 YPEL4Q96NS1 127 aa14.4□□□□□ -0.1
SMC4-201ENST00000344722 CHCHD5Q9BSY4 110 aa14.4□□□□□ -0.1
SMC4-201ENST00000344722 LINC00527Q9UJ94 153 aa14.4□□□□□ -0.1
SMC4-201ENST00000344722 I3L3M4 83 aa14.39□□□□□ -0.11
SMC4-201ENST00000344722 CFC1BP0CG36 223 aa14.39□□□□□ -0.11
SMC4-201ENST00000344722 CFC1P0CG37 223 aa14.39□□□□□ -0.11
SMC4-201ENST00000344722 USMG5Q96IX5 58 aa14.39□□□□□ -0.11
SMC4-201ENST00000344722 TRGV4A0A0C4DH28 118 aa14.39□□□□□ -0.11
SMC4-201ENST00000344722 ABCA7Q8IZY2 2146 aa14.39□□□□□ -0.11
SMC4-201ENST00000344722 VWC2LB2RUY7 222 aa14.39□□□□□ -0.11
SMC4-201ENST00000344722 SDHAF1A6NFY7 115 aa14.38□□□□□ -0.11
SMC4-201ENST00000344722 C8orf86Q6ZUL3 223 aa14.38□□□□□ -0.11
SMC4-201ENST00000344722 JPT2Q9H910 190 aa14.38□□□□□ -0.11
SMC4-201ENST00000344722 WFDC2Q14508 124 aa14.37□□□□□ -0.11
SMC4-201ENST00000344722 FAM110DQ8TAY7 271 aaPredicted RBP14.37□□□□□ -0.11
SMC4-201ENST00000344722 ZNF625Q96I27 306 aaPredicted RBP14.37□□□□□ -0.11
SMC4-201ENST00000344722 FNDC1Q4ZHG4 1894 aaPredicted RBP14.37□□□□□ -0.11
SMC4-201ENST00000344722 KRTAP27-1Q3LI81 207 aa14.37□□□□□ -0.11
SMC4-201ENST00000344722 NDUFA12Q9UI09 145 aa14.37□□□□□ -0.11
SMC4-201ENST00000344722 HELZP42694 1942 aaKnown RBP14.36□□□□□ -0.11
SMC4-201ENST00000344722 C1orf159Q96HA4 380 aa14.36□□□□□ -0.11
SMC4-201ENST00000344722 RHPN1-AS1Q9BWJ2 59 aa14.36□□□□□ -0.11
SMC4-201ENST00000344722 FXYD2P54710 66 aa14.36□□□□□ -0.11
SMC4-201ENST00000344722 TEN1Q86WV5 123 aa14.36□□□□□ -0.11
SMC4-201ENST00000344722 TMEM105Q8N8V8 129 aa14.36□□□□□ -0.11
SMC4-201ENST00000344722 CRYBA4P53673 196 aa14.36□□□□□ -0.11
SMC4-201ENST00000344722 PRSS22Q9GZN4 317 aa14.36□□□□□ -0.11
SMC4-201ENST00000344722 ACYP1P07311 99 aa14.35□□□□□ -0.11
SMC4-201ENST00000344722 C3orf36Q3SXR2 165 aa14.35□□□□□ -0.11
SMC4-201ENST00000344722 SMIM20Q8N5G0 67 aa14.35□□□□□ -0.11
SMC4-201ENST00000344722 ASXL3Q9C0F0 2248 aa14.35□□□□□ -0.11
SMC4-201ENST00000344722 PRSS29PA6NIE9 313 aa14.35□□□□□ -0.11
SMC4-201ENST00000344722 FOXI1Q12951 378 aa14.35□□□□□ -0.11
SMC4-201ENST00000344722 TPSG1Q9NRR2 321 aa14.34□□□□□ -0.11
SMC4-201ENST00000344722 TRAV13-1A0A0B4J241 112 aa14.34□□□□□ -0.11
SMC4-201ENST00000344722 TEX36Q5VZQ5 186 aa14.34□□□□□ -0.11
SMC4-201ENST00000344722 ATP6V0E2Q8NHE4 81 aa14.34□□□□□ -0.11
SMC4-201ENST00000344722 EGR2P11161 476 aaPredicted RBP14.33□□□□□ -0.11
SMC4-201ENST00000344722 ZNF493Q6ZR52 646 aa14.33□□□□□ -0.11
SMC4-201ENST00000344722 TMEM219Q86XT9 240 aa14.33□□□□□ -0.12
SMC4-201ENST00000344722 FGF23Q9GZV9 251 aaPredicted RBP14.33□□□□□ -0.12
SMC4-201ENST00000344722 TANC1Q9C0D5 1861 aa14.33□□□□□ -0.12
SMC4-201ENST00000344722 DOCK9Q9BZ29 2069 aa14.33□□□□□ -0.12
SMC4-201ENST00000344722 DUX4L9Q6RFH8 374 aaPredicted RBP14.33□□□□□ -0.12
SMC4-201ENST00000344722 C2orf70A6NJV1 201 aa14.32□□□□□ -0.12
SMC4-201ENST00000344722 ANXA2RQ3ZCQ2 193 aa14.32□□□□□ -0.12
SMC4-201ENST00000344722 C6orf226Q5I0X4 101 aa14.32□□□□□ -0.12
SMC4-201ENST00000344722 ZNF491Q8N8L2 437 aa14.32□□□□□ -0.12
SMC4-201ENST00000344722 DAZ1Q9NQZ3 744 aaKnown RBP14.32□□□□□ -0.12
SMC4-201ENST00000344722 COX6B1P14854 86 aa14.32□□□□□ -0.12
SMC4-201ENST00000344722 DKK1O94907 266 aa14.32□□□□□ -0.12
SMC4-201ENST00000344722 FRMD6-AS1P0C7T7 363 aa14.32□□□□□ -0.12
SMC4-201ENST00000344722 GP9P14770 177 aa14.32□□□□□ -0.12
SMC4-201ENST00000344722 GTSF1Q8WW33 167 aa14.32□□□□□ -0.12
SMC4-201ENST00000344722 TRAV26-1A0A087WT03 109 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms