RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SPANXA1Q9NS26 97 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 MDFICQ9P1T7 246 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 DEFB108AA8MXU0 73 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 PRDX2P32119 198 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 CRYBG3Q68DQ2 2970 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 Q6Q795 121 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 Q6ZQT7 251 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 ZNRF1Q8ND25 227 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 LINC01587Q99440 93 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 UBR5O95071 2799 aaPredicted RBP9.36□□□□□ -0.91
RTN3-203ENST00000341307 USP9XQ93008 2570 aaPredicted RBP9.36□□□□□ -0.91
RTN3-203ENST00000341307 SNCGO76070 127 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 PSMB2P49721 201 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 GTSCR1Q86UQ5 136 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 PPP1R27Q86WC6 154 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 ZNF492Q9P255 531 aa9.36□□□□□ -0.91
RTN3-203ENST00000341307 IGLV3-9A0A075B6K5 115 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 TRBV7-3A0A075B6L6 115 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 SRRM5B3KS81 715 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 DUX4L9Q6RFH8 374 aaPredicted RBP9.35□□□□□ -0.91
RTN3-203ENST00000341307 GATD1Q8NB37 220 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 PLCE1Q9P212 2302 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 POLEQ07864 2286 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 TRGV8A0A0C4DH27 118 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 ARMS2P0C7Q2 107 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 COL8A1P27658 744 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 MYCNOSP40205 109 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 KLF17Q5JT82 389 aaPredicted RBP9.35□□□□□ -0.91
RTN3-203ENST00000341307 ZFP2Q6ZN57 461 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 SBSPONQ8IVN8 264 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 RASL11BQ9BPW5 248 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 KLF12Q9Y4X4 402 aa9.35□□□□□ -0.91
RTN3-203ENST00000341307 TMSB15BA0A087X1C1 80 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 LOC107984640A0A0U1RRK4 108 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 OOEPA6NGQ2 149 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 IGHV1-46P01743 117 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 LINC00694P0DN24 101 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 BSPH1Q075Z2 132 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 ANKRD29Q8N6D5 301 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 DEFB108BQ8NET1 73 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 DAZAP1Q96EP5 407 aaKnown RBP9.34□□□□□ -0.91
RTN3-203ENST00000341307 SHISA9B4DS77 424 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 UTF1Q5T230 341 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 CIARTQ8N365 385 aaPredicted RBP9.34□□□□□ -0.91
RTN3-203ENST00000341307 HIST1H4GQ99525 98 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 MRPL32Q9BYC8 188 aaKnown RBP9.34□□□□□ -0.91
RTN3-203ENST00000341307 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
RTN3-203ENST00000341307 SPTAN1Q13813 2472 aaKnown RBP9.34□□□□□ -0.91
RTN3-203ENST00000341307 HIVEP3Q5T1R4 2406 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 ROS1P08922 2347 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 FCGR3BO75015 233 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 CCL8P80075 99 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 TNFAIP6P98066 277 aaPredicted RBP9.33□□□□□ -0.92
RTN3-203ENST00000341307 EPDR1Q9UM22 224 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 LRRK2Q5S007 2527 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 GNLYP22749 145 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 FCER1GP30273 86 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 MZT1Q08AG7 82 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 PSMG4Q5JS54 123 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 SFTA2Q6UW10 78 aa9.33□□□□□ -0.92
RTN3-203ENST00000341307 D6R8Y8 96 aa9.32□□□□□ -0.92
RTN3-203ENST00000341307 PROP1O75360 226 aa9.32□□□□□ -0.92
RTN3-203ENST00000341307 IL4P05112 153 aa9.32□□□□□ -0.92
RTN3-203ENST00000341307 C3orf36Q3SXR2 165 aa9.32□□□□□ -0.92
RTN3-203ENST00000341307 Q71RC1 249 aaPredicted RBP9.32□□□□□ -0.92
RTN3-203ENST00000341307 FXYD5Q96DB9 178 aa9.32□□□□□ -0.92
RTN3-203ENST00000341307 PAXXQ9BUH6 204 aa9.32□□□□□ -0.92
RTN3-203ENST00000341307 HOXA3O43365 443 aaPredicted RBP9.32□□□□□ -0.92
RTN3-203ENST00000341307 LHBP01229 141 aa9.32□□□□□ -0.92
RTN3-203ENST00000341307 RPL7P18124 248 aaKnown RBP9.32□□□□□ -0.92
RTN3-203ENST00000341307 ASIPP42127 132 aa9.32□□□□□ -0.92
RTN3-203ENST00000341307 ZC2HC1BQ5TFG8 222 aa9.32□□□□□ -0.92
RTN3-203ENST00000341307 SLC25A48Q6ZT89 311 aaKnown RBP9.32□□□□□ -0.92
RTN3-203ENST00000341307 OR1L8Q8NGR8 309 aa9.32□□□□□ -0.92
RTN3-203ENST00000341307 DSCAMO60469 2012 aa9.31□□□□□ -0.92
RTN3-203ENST00000341307 C15orf65H3BRN8 121 aa9.31□□□□□ -0.92
RTN3-203ENST00000341307 IGKCP01834 107 aa9.31□□□□□ -0.92
RTN3-203ENST00000341307 UBE2D3P61077 147 aa9.31□□□□□ -0.92
RTN3-203ENST00000341307 UBE2D2P62837 147 aa9.31□□□□□ -0.92
RTN3-203ENST00000341307 DCHS2Q6V1P9 2916 aa9.31□□□□□ -0.92
RTN3-203ENST00000341307 MLANAQ16655 118 aa9.31□□□□□ -0.92
RTN3-203ENST00000341307 FAM90A1Q86YD7 464 aa9.31□□□□□ -0.92
RTN3-203ENST00000341307 LEAP2Q969E1 77 aa9.31□□□□□ -0.92
RTN3-203ENST00000341307 NGBQ9NPG2 151 aa9.31□□□□□ -0.92
RTN3-203ENST00000341307 U3KQK5 164 aa9.31□□□□□ -0.92
RTN3-203ENST00000341307 RAI1Q7Z5J4 1906 aaPredicted RBP9.3□□□□□ -0.92
RTN3-203ENST00000341307 A8MWV9 139 aa9.3□□□□□ -0.92
RTN3-203ENST00000341307 C21orf62Q9NYP8 219 aa9.3□□□□□ -0.92
RTN3-203ENST00000341307 LOC107984156A0A0G2JMH3 177 aa9.3□□□□□ -0.92
RTN3-203ENST00000341307 TCL1BO95988 128 aa9.3□□□□□ -0.92
RTN3-203ENST00000341307 RIGQ13278 110 aa9.3□□□□□ -0.92
RTN3-203ENST00000341307 ARL17AQ8IVW1 177 aa9.3□□□□□ -0.92
RTN3-203ENST00000341307 FAM216BQ8N7L0 139 aa9.3□□□□□ -0.92
RTN3-203ENST00000341307 NUP37Q8NFH4 326 aa9.3□□□□□ -0.92
RTN3-203ENST00000341307 CCL13Q99616 98 aa9.3□□□□□ -0.92
RTN3-203ENST00000341307 RNF7Q9UBF6 113 aa9.3□□□□□ -0.92
RTN3-203ENST00000341307 CENPEQ02224 2701 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms