RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 IGHV1-2P23083 117 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 RPL13AP40429 203 aaKnown RBP6.57□□□□□ -1.36
SKA2-201ENST00000330137 Q6ZT83 130 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 ZNRF1Q8ND25 227 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 RASL11BQ9BPW5 248 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 C12orf49Q9H741 205 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 AAMDCQ9H7C9 122 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 FREM1Q5H8C1 2179 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 E7EUB6 86 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 CD7P09564 240 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 AJUBAQ96IF1 538 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 TPPP3Q9BW30 176 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 CACNA1DQ01668 2161 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 CEP250Q9BV73 2442 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 ASXL3Q9C0F0 2248 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 FAM90A27PA6NNH2 459 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 LGALS1P09382 135 aaKnown RBP6.57□□□□□ -1.36
SKA2-201ENST00000330137 PPIFP30405 207 aaKnown RBP6.57□□□□□ -1.36
SKA2-201ENST00000330137 MAGEA5P43359 124 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 DIAPH2-AS1Q14236 149 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 ZNF672Q499Z4 452 aaPredicted RBP6.57□□□□□ -1.36
SKA2-201ENST00000330137 IL17RELQ6ZVW7 336 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 LEAP2Q969E1 77 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 SPXQ9BT56 116 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 MRPL20Q9BYC9 149 aaKnown RBP6.57□□□□□ -1.36
SKA2-201ENST00000330137 YAE1D1Q9NRH1 226 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 HIF1ANQ9NWT6 349 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 DCHS1Q96JQ0 3298 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 DSCAML1Q8TD84 2053 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 MRPS12O15235 138 aaKnown RBP6.56□□□□□ -1.36
SKA2-201ENST00000330137 IGHV3-13P01766 116 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 IGHG3P01860 377 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 HOXA4Q00056 320 aaPredicted RBP6.56□□□□□ -1.36
SKA2-201ENST00000330137 SPRNQ5BIV9 151 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 PAPPA-AS1Q5QFB9 102 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 TMEM78Q5T7P6 136 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 ANKRD29Q8N6D5 301 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 CNIH1O95406 144 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 HLA-DMBP28068 263 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 FXYD7P58549 80 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 SPINK14Q6IE38 97 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 NDUFA11Q86Y39 141 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 KNL1Q8NG31 2342 aa6.56□□□□□ -1.36
SKA2-201ENST00000330137 LOC107984156A0A0G2JMH3 177 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 NTN3O00634 580 aaPredicted RBP6.55□□□□□ -1.36
SKA2-201ENST00000330137 P0DMU3 169 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 FAM231AP0DMU4 169 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 FAM231CP0DMU5 169 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 ARL17AQ8IVW1 177 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 C10orf126Q8N4M7 172 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 RAB1BQ9H0U4 201 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 RAXQ9Y2V3 346 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 ASCC3Q8N3C0 2202 aaKnown RBP6.55□□□□□ -1.36
SKA2-201ENST00000330137 FAM240AA0A1B0GVK7 77 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 TCL1BO95988 128 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 CD59P13987 128 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 LYZP61626 148 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 FOXC1Q12948 553 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 C3orf36Q3SXR2 165 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 ORMDL2Q53FV1 153 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 UTF1Q5T230 341 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 SAP25Q8TEE9 199 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 PSMG3-AS1Q96PY0 264 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 PRR25Q96S07 402 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 CACNA1EQ15878 2313 aa6.55□□□□□ -1.36
SKA2-201ENST00000330137 CCDC179H3BU77 68 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 BRI3O95415 125 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 RPL27AP46776 148 aaKnown RBP6.54□□□□□ -1.36
SKA2-201ENST00000330137 WFDC3Q8IUB2 231 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 GAFA1Q96PS6 74 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 RNF7Q9UBF6 113 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 IGHV4-4A0A075B6R2 117 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 SMKR1H3BMG3 65 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 SLC25A20O43772 301 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 COX6B1P14854 86 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 MRGPRG-AS1Q2M3A8 158 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 C8orf49Q96NF6 230 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 IMUPQ9GZP8 106 aa6.54□□□□□ -1.36
SKA2-201ENST00000330137 CECR9P0C854 216 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 EGR2P11161 476 aaPredicted RBP6.53□□□□□ -1.36
SKA2-201ENST00000330137 TEX36Q5VZQ5 186 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 ZFP2Q6ZN57 461 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 NEXN-AS1Q8NBZ9 246 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 NRGNQ92686 78 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 CITED2Q99967 270 aaPredicted RBP6.53□□□□□ -1.36
SKA2-201ENST00000330137 IGHV3OR15-7A0A075B7D8 119 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 H3BTX0 84 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 I3L2K1 104 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 CRYGBP07316 175 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 ZNF883P0CG24 379 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 SRSF9Q13242 221 aaKnown RBP eCLIP6.53□□□□□ -1.36
SKA2-201ENST00000330137 C5orf47Q569G3 176 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 RASL10AQ92737 203 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 TOMM6Q96B49 74 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 VPREB3Q9UKI3 123 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 SPTBN2O15020 2390 aa6.53□□□□□ -1.36
SKA2-201ENST00000330137 TRAV8-2A0A0B4J237 113 aa6.52□□□□□ -1.37
SKA2-201ENST00000330137 WIPF1O43516 503 aa6.52□□□□□ -1.37
SKA2-201ENST00000330137 HES1Q14469 280 aa6.52□□□□□ -1.37
SKA2-201ENST00000330137 ZNF474Q6S9Z5 364 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms