RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 OOSP1A8MZH6 123 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 CCL25O15444 150 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 FAM104BQ5XKR9 115 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 Q8N9W7 124 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 LINC01548A6NM66 108 aa10.92□□□□□ -0.66
ATP2C1-201ENST00000328560 PRAC2D3DTV9 90 aa10.92□□□□□ -0.66
ATP2C1-201ENST00000328560 ATP6V0E1O15342 81 aa10.92□□□□□ -0.66
ATP2C1-201ENST00000328560 S100A7P31151 101 aa10.92□□□□□ -0.66
ATP2C1-201ENST00000328560 EFNA4P52798 201 aa10.92□□□□□ -0.66
ATP2C1-201ENST00000328560 MRPL51Q4U2R6 128 aaKnown RBP10.92□□□□□ -0.66
ATP2C1-201ENST00000328560 DTX2Q86UW9 622 aa10.92□□□□□ -0.66
ATP2C1-201ENST00000328560 A0A1B0GW15 77 aa10.92□□□□□ -0.66
ATP2C1-201ENST00000328560 SAA4P35542 130 aa10.92□□□□□ -0.66
ATP2C1-201ENST00000328560 C1orf122Q6ZSJ8 110 aa10.92□□□□□ -0.66
ATP2C1-201ENST00000328560 MAP1AP78559 2803 aaPredicted RBP10.91□□□□□ -0.66
ATP2C1-201ENST00000328560 TMEM219Q86XT9 240 aa10.91□□□□□ -0.66
ATP2C1-201ENST00000328560 ORAOV1Q8WV07 137 aa10.91□□□□□ -0.66
ATP2C1-201ENST00000328560 C18orf15Q96N68 181 aa10.91□□□□□ -0.66
ATP2C1-201ENST00000328560 BPESC1Q9GZL8 116 aa10.91□□□□□ -0.66
ATP2C1-201ENST00000328560 NPYP01303 97 aa10.9□□□□□ -0.66
ATP2C1-201ENST00000328560 BMI1P35226 326 aa10.9□□□□□ -0.66
ATP2C1-201ENST00000328560 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.9□□□□□ -0.664e-7■■■■□ 23.6
ATP2C1-201ENST00000328560 CACNG7P62955 275 aa10.9□□□□□ -0.66
ATP2C1-201ENST00000328560 Q8N6K4 173 aa10.9□□□□□ -0.66
ATP2C1-201ENST00000328560 EVI2AP22794 236 aa10.9□□□□□ -0.66
ATP2C1-201ENST00000328560 LINC01545Q5VT33 79 aa10.9□□□□□ -0.66
ATP2C1-201ENST00000328560 SCRT2Q9NQ03 307 aa10.9□□□□□ -0.66
ATP2C1-201ENST00000328560 J3KRW8 73 aa10.89□□□□□ -0.67
ATP2C1-201ENST00000328560 FOXE3Q13461 319 aa10.89□□□□□ -0.67
ATP2C1-201ENST00000328560 IGHG4P01861 327 aa10.89□□□□□ -0.67
ATP2C1-201ENST00000328560 GNLYP22749 145 aa10.89□□□□□ -0.67
ATP2C1-201ENST00000328560 GAS8-AS1O95177 125 aa10.89□□□□□ -0.67
ATP2C1-201ENST00000328560 GOSR1O95249 250 aa10.89□□□□□ -0.67
ATP2C1-201ENST00000328560 BVES-AS1Q5T3Y7 98 aa10.89□□□□□ -0.67
ATP2C1-201ENST00000328560 PRSS57Q6UWY2 283 aa10.89□□□□□ -0.67
ATP2C1-201ENST00000328560 IL17RELQ6ZVW7 336 aa10.89□□□□□ -0.67
ATP2C1-201ENST00000328560 SIRPDQ9H106 197 aa10.89□□□□□ -0.67
ATP2C1-201ENST00000328560 OR4C5Q8NGB2 326 aa10.88□□□□□ -0.67
ATP2C1-201ENST00000328560 ZNF48Q96MX3 618 aaPredicted RBP10.88□□□□□ -0.67
ATP2C1-201ENST00000328560 A0A096LNJ9 63 aa10.88□□□□□ -0.67
ATP2C1-201ENST00000328560 FABP5P3A8MUU1 101 aa10.88□□□□□ -0.67
ATP2C1-201ENST00000328560 UQCRFS1P47985 274 aa10.88□□□□□ -0.67
ATP2C1-201ENST00000328560 ZNF493Q6ZR52 646 aa10.88□□□□□ -0.67
ATP2C1-201ENST00000328560 UBE2V1Q13404 147 aa10.88□□□□□ -0.67
ATP2C1-201ENST00000328560 IGHV2-70DA0A0C4DH43 119 aa10.87□□□□□ -0.67
ATP2C1-201ENST00000328560 UBE2E1P51965 193 aa10.87□□□□□ -0.67
ATP2C1-201ENST00000328560 ZNF502Q8TBZ5 544 aa10.87□□□□□ -0.67
ATP2C1-201ENST00000328560 SELENOKQ9Y6D0 94 aa10.87□□□□□ -0.67
ATP2C1-201ENST00000328560 GATA1P15976 413 aaPredicted RBP10.87□□□□□ -0.67
ATP2C1-201ENST00000328560 C12orf54Q6X4T0 127 aa10.87□□□□□ -0.67
ATP2C1-201ENST00000328560 COL12A1Q99715 3063 aa10.87□□□□□ -0.67
ATP2C1-201ENST00000328560 FAM110DQ8TAY7 271 aaPredicted RBP10.86□□□□□ -0.67
ATP2C1-201ENST00000328560 MS4A6AQ9H2W1 248 aa10.86□□□□□ -0.67
ATP2C1-201ENST00000328560 BUB3O43684 328 aa10.86□□□□□ -0.67
ATP2C1-201ENST00000328560 HBDP02042 147 aa10.86□□□□□ -0.67
ATP2C1-201ENST00000328560 RPS20P60866 119 aaKnown RBP10.86□□□□□ -0.67
ATP2C1-201ENST00000328560 EBI3Q14213 229 aa10.86□□□□□ -0.67
ATP2C1-201ENST00000328560 NMUP48645 174 aa10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 CFAP161Q6P656 301 aa10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 PIP4P2Q8N4L2 257 aa10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 PIEZO1Q92508 2521 aa10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 IFI27L1Q96BM0 104 aa10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 GATD1Q8NB37 220 aa10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 CCDC140Q96MF4 163 aa10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 UFC1Q9Y3C8 167 aa10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 IGKV3-7A0A075B6H7 116 aa10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 BRD3OSQ6XYD6 125 aa10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 ITLN2Q8WWU7 325 aaPredicted RBP10.85□□□□□ -0.67
ATP2C1-201ENST00000328560 TAX1BP3O14907 124 aa10.84□□□□□ -0.67
ATP2C1-201ENST00000328560 COX8AP10176 69 aa10.84□□□□□ -0.67
ATP2C1-201ENST00000328560 HIST1H1AQ02539 215 aaPredicted RBP10.84□□□□□ -0.67
ATP2C1-201ENST00000328560 Q6ZQT7 251 aa10.84□□□□□ -0.67
ATP2C1-201ENST00000328560 METTL26Q96S19 204 aa10.84□□□□□ -0.67
ATP2C1-201ENST00000328560 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
ATP2C1-201ENST00000328560 ZFAND3Q9H8U3 227 aa10.84□□□□□ -0.67
ATP2C1-201ENST00000328560 TMEM190Q8WZ59 177 aa10.84□□□□□ -0.67
ATP2C1-201ENST00000328560 MAP1LC3AQ9H492 121 aa10.84□□□□□ -0.67
ATP2C1-201ENST00000328560 IGLC6P0CF74 106 aa10.83□□□□□ -0.67
ATP2C1-201ENST00000328560 TMEM78Q5T7P6 136 aa10.83□□□□□ -0.67
ATP2C1-201ENST00000328560 AMMECR1LQ6DCA0 310 aa10.83□□□□□ -0.67
ATP2C1-201ENST00000328560 EEF1AKMT3Q96AZ1 226 aa10.83□□□□□ -0.67
ATP2C1-201ENST00000328560 NPFFO15130 113 aa10.83□□□□□ -0.68
ATP2C1-201ENST00000328560 LEPP41159 167 aa10.83□□□□□ -0.68
ATP2C1-201ENST00000328560 RNASE8Q8TDE3 154 aaKnown RBP10.83□□□□□ -0.68
ATP2C1-201ENST00000328560 DKK2Q9UBU2 259 aa10.83□□□□□ -0.68
ATP2C1-201ENST00000328560 U3KQK5 164 aa10.83□□□□□ -0.68
ATP2C1-201ENST00000328560 SPRY2O43597 315 aa10.83□□□□□ -0.68
ATP2C1-201ENST00000328560 PRSS1P07477 247 aa10.83□□□□□ -0.68
ATP2C1-201ENST00000328560 CENPVL3A0A0U1RRI6 287 aa10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 RPL11P62913 178 aaKnown RBP10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 LY6EQ16553 131 aa10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 NAA38Q9BRA0 125 aaKnown RBP10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 LMO4P61968 165 aa10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 CSPG4Q6UVK1 2322 aa10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 TRAV26-2A0A0B4J265 109 aa10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 CLPSL1A2RUU4 121 aa10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 ATP5G2Q06055 141 aa10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 RNF151Q2KHN1 245 aa10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 AJUBAQ96IF1 538 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms