RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 TMEM42Q69YG0 159 aa9.32□□□□□ -0.92
LDLRAD3-201ENST00000315571 AJUBAQ96IF1 538 aa9.32□□□□□ -0.92
LDLRAD3-201ENST00000315571 PCNX1Q96RV3 2341 aa9.32□□□□□ -0.92
LDLRAD3-201ENST00000315571 A0A1B0GXF2 115 aa9.32□□□□□ -0.92
LDLRAD3-201ENST00000315571 ZNF503-AS2A6NEH8 195 aa9.32□□□□□ -0.92
LDLRAD3-201ENST00000315571 IGLV2-14P01704 120 aa9.32□□□□□ -0.92
LDLRAD3-201ENST00000315571 CRYGSP22914 178 aa9.32□□□□□ -0.92
LDLRAD3-201ENST00000315571 HERVK_113P61574 105 aa9.32□□□□□ -0.92
LDLRAD3-201ENST00000315571 LINC00305Q7Z4B0 112 aa9.32□□□□□ -0.92
LDLRAD3-201ENST00000315571 HLA-DRB4P13762 266 aa9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 WDR31Q8NA23 367 aa9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 HIGD1AQ9Y241 93 aa9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 HLA-DRB4X5D2U9 266 aa9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 OOEPA6NGQ2 149 aa9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 ERHP84090 104 aaKnown RBP9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 CR1LQ2VPA4 569 aa9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 RPL39P5Q59GN2 51 aa9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 CFAP126Q5VTH2 177 aa9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 ZNF329Q86UD4 541 aa9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 Q8N7P7 452 aa9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 C1orf43Q9BWL3 253 aa9.31□□□□□ -0.92
LDLRAD3-201ENST00000315571 J3KT08 172 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 SLC25A20O43772 301 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 ATP5IP56385 69 aaPredicted RBP9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 CALYQ9NYX4 217 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 HIGD1BQ9P298 99 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 CFAP46Q8IYW2 2715 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 IGHV3-21A0A0B4J1V1 117 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 F5H768 121 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 NHLRC4P0CG21 123 aaPredicted RBP9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 RNASE6Q93091 150 aaKnown RBP9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 FAM208BQ5VWN6 2430 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 CENPVL3A0A0U1RRI6 287 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 TFF1P04155 84 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 FHL3Q13643 280 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 PSMG4Q5JS54 123 aa9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 SLC25A48Q6ZT89 311 aaKnown RBP9.3□□□□□ -0.92
LDLRAD3-201ENST00000315571 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 NPFFO15130 113 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 DUX4L9Q6RFH8 374 aaPredicted RBP9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 LINC00596Q86U02 117 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 MRPL32Q9BYC8 188 aaKnown RBP9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 SLC25A15Q9Y619 301 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 ZNF462Q96JM2 2506 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 MYMXA0A1B0GTQ4 84 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 M0R1B8 84 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 CRLF1O75462 422 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 PMVKQ15126 192 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 NRGNQ92686 78 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 FAM90A9PA6NNJ1 464 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 ZNF815PA8K554 130 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 J3QT63 122 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 TNFRSF6BO95407 300 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 C2orf83Q53S99 150 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 MORN5Q5VZ52 161 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 FAM19A5Q7Z5A7 132 aaPredicted RBP9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 DCTN5Q9BTE1 182 aa9.29□□□□□ -0.92
LDLRAD3-201ENST00000315571 TMEM213A2RRL7 107 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 MPV17P39210 176 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 LOXL3P58215 753 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 SRSF2Q01130 221 aaKnown RBP9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 LINC00322Q6ZN03 302 aaPredicted RBP9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 OR11H6Q8NGC7 330 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 LEAP2Q969E1 77 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 ASIPP42127 132 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 MRPL35Q9NZE8 188 aaKnown RBP9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 PRR20EP86478 221 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 PRR20CP86479 221 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 PRR20DP86480 221 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 PRR20BP86481 221 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 PRR20AP86496 221 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 SRSF1Q07955 248 aaKnown RBP eCLIP9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 FBXL19-AS1Q494R0 122 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 GAGE2AQ6NT46 116 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 ZNF503Q96F45 646 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 C21orf62Q9NYP8 219 aa9.28□□□□□ -0.92
LDLRAD3-201ENST00000315571 ZNF497Q6ZNH5 498 aa9.27□□□□□ -0.92
LDLRAD3-201ENST00000315571 ITLN2Q8WWU7 325 aaPredicted RBP9.27□□□□□ -0.92
LDLRAD3-201ENST00000315571 PRNDQ9UKY0 176 aa9.27□□□□□ -0.92
LDLRAD3-201ENST00000315571 OOSP1A8MZH6 123 aa9.27□□□□□ -0.93
LDLRAD3-201ENST00000315571 IGKV3-15P01624 115 aa9.27□□□□□ -0.93
LDLRAD3-201ENST00000315571 CECR9P0C854 216 aa9.27□□□□□ -0.93
LDLRAD3-201ENST00000315571 CDSNQ15517 529 aa9.27□□□□□ -0.93
LDLRAD3-201ENST00000315571 CARD19Q96LW7 228 aa9.27□□□□□ -0.93
LDLRAD3-201ENST00000315571 FAM236AA0A1B0GUQ0 79 aa9.27□□□□□ -0.93
LDLRAD3-201ENST00000315571 FAM236BA0A1B0GV22 79 aa9.27□□□□□ -0.93
LDLRAD3-201ENST00000315571 APELAP0DMC3 54 aa9.27□□□□□ -0.93
LDLRAD3-201ENST00000315571 DNAJC30Q96LL9 226 aa9.27□□□□□ -0.93
LDLRAD3-201ENST00000315571 LINC01548A6NM66 108 aa9.26□□□□□ -0.93
LDLRAD3-201ENST00000315571 NPIPB11E5RHQ5 1161 aa9.26□□□□□ -0.93
LDLRAD3-201ENST00000315571 ATP5LO75964 103 aa9.26□□□□□ -0.93
LDLRAD3-201ENST00000315571 FMC1Q96HJ9 113 aa9.26□□□□□ -0.93
LDLRAD3-201ENST00000315571 Q9H3A6 140 aa9.26□□□□□ -0.93
LDLRAD3-201ENST00000315571 PRO0461Q9UI25 63 aa9.26□□□□□ -0.93
LDLRAD3-201ENST00000315571 HIVEP3Q5T1R4 2406 aa9.26□□□□□ -0.93
LDLRAD3-201ENST00000315571 IGHV1-18A0A0C4DH31 117 aa9.26□□□□□ -0.93
LDLRAD3-201ENST00000315571 HAX1O00165 279 aa9.26□□□□□ -0.93
LDLRAD3-201ENST00000315571 CD40P25942 277 aa9.26□□□□□ -0.93
LDLRAD3-201ENST00000315571 GRNP28799 593 aaKnown RBP9.26□□□□□ -0.93
LDLRAD3-201ENST00000315571 ZNF826PQ6ZT77 177 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms