RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ZNRD1Q9P1U0 126 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 GREB1Q4ZG55 1949 aa10.97□□□□□ -0.65
CLCN6-201ENST00000312413 SAA4P35542 130 aa10.97□□□□□ -0.65
CLCN6-201ENST00000312413 GAGE5Q13069 117 aa10.97□□□□□ -0.65
CLCN6-201ENST00000312413 TMEM126AQ9H061 195 aa10.97□□□□□ -0.65
CLCN6-201ENST00000312413 TRBV25-1A0A075B6N4 114 aa10.97□□□□□ -0.65
CLCN6-201ENST00000312413 ANKRD29Q8N6D5 301 aa10.97□□□□□ -0.65
CLCN6-201ENST00000312413 TMEM14CQ9P0S9 112 aa10.97□□□□□ -0.65
CLCN6-201ENST00000312413 HOXD3P31249 432 aaPredicted RBP10.97□□□□□ -0.65
CLCN6-201ENST00000312413 NOTCH3Q9UM47 2321 aa10.97□□□□□ -0.65
CLCN6-201ENST00000312413 TCTEX1D4Q5JR98 221 aa10.97□□□□□ -0.65
CLCN6-201ENST00000312413 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.96□□□□□ -0.65
CLCN6-201ENST00000312413 COL8A2P25067 703 aa10.96□□□□□ -0.65
CLCN6-201ENST00000312413 SPINK13Q1W4C9 94 aa10.96□□□□□ -0.65
CLCN6-201ENST00000312413 CRIPAKQ8N1N5 446 aa10.96□□□□□ -0.65
CLCN6-201ENST00000312413 RALGAPA2Q2PPJ7 1873 aa10.96□□□□□ -0.65
CLCN6-201ENST00000312413 J3QQQ9 107 aa10.96□□□□□ -0.65
CLCN6-201ENST00000312413 C12orf74Q32Q52 190 aa10.96□□□□□ -0.65
CLCN6-201ENST00000312413 HAPLN4Q86UW8 402 aa10.96□□□□□ -0.65
CLCN6-201ENST00000312413 CREBBPQ92793 2442 aa10.96□□□□□ -0.66
CLCN6-201ENST00000312413 TET1Q8NFU7 2136 aa10.96□□□□□ -0.66
CLCN6-201ENST00000312413 A0A0G2JNJ9 132 aa10.96□□□□□ -0.66
CLCN6-201ENST00000312413 PSCAO43653 123 aa10.96□□□□□ -0.66
CLCN6-201ENST00000312413 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.66
CLCN6-201ENST00000312413 Q9UFV3 132 aa10.96□□□□□ -0.66
CLCN6-201ENST00000312413 CD59P13987 128 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 C15orf53Q8NAA6 179 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 SPANXCQ9NY87 97 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 PDCD11Q14690 1871 aaKnown RBP10.95□□□□□ -0.66
CLCN6-201ENST00000312413 ATP6V0E1O15342 81 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 CRLF1O75462 422 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 NTN5Q8WTR8 489 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-201ENST00000312413 IGHV1OR15-1A0A075B7D0 117 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 IGLC7A0M8Q6 106 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 CDKN1BP46527 198 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 SPTAN1Q13813 2472 aaKnown RBP10.95□□□□□ -0.66
CLCN6-201ENST00000312413 ZNF561-AS1K7EIQ3 104 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 NDUFS7O75251 213 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 FER1L5A0AVI2 2057 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 BRCA1P38398 1863 aaKnown RBP10.95□□□□□ -0.66
CLCN6-201ENST00000312413 TRAV13-2A0A0B4J235 113 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 ANXA2RQ3ZCQ2 193 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 C8orf86Q6ZUL3 223 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 KLK9Q9UKQ9 250 aa10.95□□□□□ -0.66
CLCN6-201ENST00000312413 IGHV3-16A0A0C4DH30 117 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 H3BRN7 92 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 ZNF833PQ6ZTB9 187 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 PYGO2Q9BRQ0 406 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 IGHG3P01860 377 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 ZC2HC1AQ96GY0 325 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 DKK2Q9UBU2 259 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 MYO7BQ6PIF6 2116 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 CRYBA4P53673 196 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 DOCK6Q96HP0 2047 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 WIPF3A6NGB9 483 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 CCL25O15444 150 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 IGHG4P01861 327 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 DSCR8Q96T75 97 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 XCL2Q9UBD3 114 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 PI4KAP42356 2102 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 A0A0G2JMZ2 1700 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 LRRC37A2A6NM11 1700 aa10.94□□□□□ -0.66
CLCN6-201ENST00000312413 BOD1L2Q8IYS8 172 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 C20orf78Q9BR46 151 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 SCRT2Q9NQ03 307 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 NXPH4O95158 308 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 TRAV12-1A0A0B4J245 112 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 GAGE6Q13070 117 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 TMEM243Q9BU79 118 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 ZNF747Q9BV97 191 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 TRAV25A0A0B4J276 109 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 KIR2DL5BA0A0G2JN68 375 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 KIR2DL5BA0A0G2JPC4 375 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 KIR2DL5AQ8N109 375 aa10.93□□□□□ -0.66
CLCN6-201ENST00000312413 PHF3Q92576 2039 aaKnown RBP10.92□□□□□ -0.66
CLCN6-201ENST00000312413 LY6HO94772 140 aa10.92□□□□□ -0.66
CLCN6-201ENST00000312413 DEFB125Q8N687 156 aa10.92□□□□□ -0.66
CLCN6-201ENST00000312413 B5MCH6 92 aa10.92□□□□□ -0.66
CLCN6-201ENST00000312413 WT1-ASQ06250 92 aa10.92□□□□□ -0.66
CLCN6-201ENST00000312413 ZNRF2Q8NHG8 242 aa10.92□□□□□ -0.66
CLCN6-201ENST00000312413 FXYD5Q96DB9 178 aa10.92□□□□□ -0.66
CLCN6-201ENST00000312413 GREB1LQ9C091 1923 aaPredicted RBP10.92□□□□□ -0.66
CLCN6-201ENST00000312413 RBM3P98179 157 aaKnown RBP10.92□□□□□ -0.66
CLCN6-201ENST00000312413 K7EM74 188 aa10.92□□□□□ -0.66
CLCN6-201ENST00000312413 TMEM258P61165 79 aa10.91□□□□□ -0.66
CLCN6-201ENST00000312413 LY6DQ14210 128 aa10.91□□□□□ -0.66
CLCN6-201ENST00000312413 NKAPP1Q8N9T2 125 aa10.91□□□□□ -0.66
CLCN6-201ENST00000312413 BPESC1Q9GZL8 116 aa10.91□□□□□ -0.66
CLCN6-201ENST00000312413 CFC1BP0CG36 223 aa10.91□□□□□ -0.66
CLCN6-201ENST00000312413 CFC1P0CG37 223 aa10.91□□□□□ -0.66
CLCN6-201ENST00000312413 UBE2E1P51965 193 aa10.91□□□□□ -0.66
CLCN6-201ENST00000312413 C5orf47Q569G3 176 aa10.91□□□□□ -0.66
CLCN6-201ENST00000312413 TINCRA0A1B0GVN0 87 aa10.91□□□□□ -0.66
CLCN6-201ENST00000312413 KLF5Q13887 457 aaPredicted RBP10.91□□□□□ -0.66
CLCN6-201ENST00000312413 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 HERVK_113P63121 156 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 WIPF2Q8TF74 440 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-201ENST00000312413 PKDREJQ9NTG1 2253 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 CASP8AP2Q9UKL3 1982 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 GATA4P43694 442 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms