RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 MT-ND6P03923 174 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 SLAQ13239 276 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 COX19Q49B96 90 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 RNF152Q8N8N0 203 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 RBAKDNA6NC62 111 aa10.33□□□□□ -0.76
CHMP4C-201ENST00000297265 AMBPP02760 352 aa10.33□□□□□ -0.76
CHMP4C-201ENST00000297265 OR2D3Q8NGH3 330 aa10.33□□□□□ -0.76
CHMP4C-201ENST00000297265 C20orf173Q96LM9 149 aa10.33□□□□□ -0.76
CHMP4C-201ENST00000297265 IGHV7-4-1A0A0J9YVY3 117 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 FBLL1A6NHQ2 334 aaKnown RBP10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 HLA-DQA1P01909 254 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 FABP4P15090 132 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 FOXE3Q13461 319 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 KIAA1644Q3SXP7 199 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 SAPCD1Q5SSQ6 148 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 OR10D4PQ8NGN7 298 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 MRPL53Q96EL3 112 aaKnown RBP10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 PGLYRP4Q96LB8 373 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 AGPAT4-IT1Q9H0P7 198 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 MYO9AB2RTY4 2548 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 F2Z2F3 143 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 K7EMT4 169 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 ELANEP08246 267 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 SMIM6P0DI80 62 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 PYY3Q5JQD4 70 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 RBPMS2Q6ZRY4 209 aaKnown RBP10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 RHPN1-AS1Q9BWJ2 59 aa10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 DAZ1Q9NQZ3 744 aaKnown RBP10.32□□□□□ -0.76
CHMP4C-201ENST00000297265 A8MWP6 167 aa10.31□□□□□ -0.76
CHMP4C-201ENST00000297265 SH2D1AO60880 128 aa10.31□□□□□ -0.76
CHMP4C-201ENST00000297265 Q0VG73 95 aa10.31□□□□□ -0.76
CHMP4C-201ENST00000297265 SMPXQ9UHP9 88 aa10.31□□□□□ -0.76
CHMP4C-201ENST00000297265 HECTD1Q9ULT8 2610 aa10.31□□□□□ -0.76
CHMP4C-201ENST00000297265 CRISP2P16562 243 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 RAB4BP61018 213 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 SSBP4Q9BWG4 385 aaPredicted RBP10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 A0A1W2PS18 150 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 CD5LO43866 347 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 CAMPP49913 170 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 PRR31Q5SQ13 230 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 FAM162BQ5T6X4 162 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 C9orf47Q6ZRZ4 202 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 TMEM86BQ8N661 226 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 UBE2E2Q96LR5 201 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 ESM1Q9NQ30 184 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 PPP1R14DQ9NXH3 145 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 SELENOKQ9Y6D0 94 aa10.3□□□□□ -0.76
CHMP4C-201ENST00000297265 TMEM213A2RRL7 107 aa10.29□□□□□ -0.76
CHMP4C-201ENST00000297265 APCSP02743 223 aa10.29□□□□□ -0.76
CHMP4C-201ENST00000297265 CT45A10P0DMU9 189 aa10.29□□□□□ -0.76
CHMP4C-201ENST00000297265 S100A2P29034 98 aa10.29□□□□□ -0.76
CHMP4C-201ENST00000297265 FAM106AQ4KMX7 169 aa10.29□□□□□ -0.76
CHMP4C-201ENST00000297265 CDPF1Q6NVV7 123 aa10.29□□□□□ -0.76
CHMP4C-201ENST00000297265 C16orf92Q96LL3 132 aa10.29□□□□□ -0.76
CHMP4C-201ENST00000297265 PACRGQ96M98 296 aaPredicted RBP10.29□□□□□ -0.76
CHMP4C-201ENST00000297265 HAX1O00165 279 aa10.28□□□□□ -0.76
CHMP4C-201ENST00000297265 LGALS1P09382 135 aaKnown RBP10.28□□□□□ -0.76
CHMP4C-201ENST00000297265 ZNF705DP0CH99 300 aaPredicted RBP10.28□□□□□ -0.76
CHMP4C-201ENST00000297265 ZNF705BP0CI00 300 aaPredicted RBP10.28□□□□□ -0.76
CHMP4C-201ENST00000297265 ESDP10768 282 aa10.28□□□□□ -0.76
CHMP4C-201ENST00000297265 HBBP68871 147 aa10.28□□□□□ -0.76
CHMP4C-201ENST00000297265 TCTEX1D4Q5JR98 221 aa10.28□□□□□ -0.76
CHMP4C-201ENST00000297265 NRN1Q9NPD7 142 aa10.28□□□□□ -0.76
CHMP4C-201ENST00000297265 CLEC5AQ9NY25 188 aa10.28□□□□□ -0.76
CHMP4C-201ENST00000297265 IGHV4OR15-8A0A075B7B6 117 aa10.27□□□□□ -0.76
CHMP4C-201ENST00000297265 A0A087WW49 117 aa10.27□□□□□ -0.76
CHMP4C-201ENST00000297265 FAM181BA6NEQ2 426 aa10.27□□□□□ -0.76
CHMP4C-201ENST00000297265 CYSRT1A8MQ03 144 aa10.27□□□□□ -0.76
CHMP4C-201ENST00000297265 ARMS2P0C7Q2 107 aa10.27□□□□□ -0.76
CHMP4C-201ENST00000297265 SRIP30626 198 aa10.27□□□□□ -0.76
CHMP4C-201ENST00000297265 DEFB1P60022 68 aa10.27□□□□□ -0.76
CHMP4C-201ENST00000297265 C18orf65Q6ZTR6 163 aa10.27□□□□□ -0.76
CHMP4C-201ENST00000297265 DNAJC9-AS1A6NH13 148 aa10.27□□□□□ -0.77
CHMP4C-201ENST00000297265 SERF1AO75920 110 aa10.27□□□□□ -0.77
CHMP4C-201ENST00000297265 Q6ZSV7 163 aa10.27□□□□□ -0.77
CHMP4C-201ENST00000297265 TEX29Q8N6K0 151 aa10.27□□□□□ -0.77
CHMP4C-201ENST00000297265 KLHDC1Q8N7A1 406 aa10.27□□□□□ -0.77
CHMP4C-201ENST00000297265 TMEM189A5PLL7 270 aa10.26□□□□□ -0.77
CHMP4C-201ENST00000297265 ZNF138P52744 262 aa10.26□□□□□ -0.77
CHMP4C-201ENST00000297265 OR10J3Q5JRS4 329 aa10.26□□□□□ -0.77
CHMP4C-201ENST00000297265 Q6ZQT7 251 aa10.26□□□□□ -0.77
CHMP4C-201ENST00000297265 DCANP1Q8TF63 244 aa10.26□□□□□ -0.77
CHMP4C-201ENST00000297265 RCHY1Q96PM5 261 aa10.26□□□□□ -0.77
CHMP4C-201ENST00000297265 ALKBH7Q9BT30 221 aaPredicted RBP10.26□□□□□ -0.77
CHMP4C-201ENST00000297265 C11orf21Q9P2W6 132 aa10.26□□□□□ -0.77
CHMP4C-201ENST00000297265 TMSB15BA0A087X1C1 80 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 A0A1B0GUT8 65 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 FABP5P3A8MUU1 101 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 LGALS9O00182 355 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 SRD5A1P18405 259 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 BMI1P35226 326 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 SRSF2Q01130 221 aaKnown RBP10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 REC114Q7Z4M0 266 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 GATD1Q8NB37 220 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 C18orf32Q8TCD1 76 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 NIT2Q9NQR4 276 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 UFC1Q9Y3C8 167 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 IGKV3-7A0A075B6H7 116 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 HOXD3P31249 432 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms