RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 J3KT08 172 aa7.11□□□□□ -1.27
NIPBL-201ENST00000282516 F6UB75 175 aa7.11□□□□□ -1.27
NIPBL-201ENST00000282516 TMEM14EPQ6UXP3 125 aa7.11□□□□□ -1.27
NIPBL-201ENST00000282516 LINC01356Q8N9X3 169 aa7.11□□□□□ -1.27
NIPBL-201ENST00000282516 NDUFB8O95169 186 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 SEC61GP60059 68 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 LINC01545Q5VT33 79 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 SLC25A16P16260 332 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 C2orf66Q6UXQ4 117 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 NDUFB1O75438 58 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 TMEM200BQ69YZ2 307 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 GAS1P54826 345 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 IGHV1-18A0A0C4DH31 117 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 H0YIZ8 118 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 DKK1O94907 266 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 LINC00114Q6XXX2 140 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 CFHR4Q92496 578 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 LINC00527Q9UJ94 153 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 C8orf31Q8N9H6 132 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 ACYP1P07311 99 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 AZU1P20160 251 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 MGAMO43451 1857 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 GAGE12HA6NDE8 117 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 TMEM178BH3BS89 294 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 Q0VG73 95 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 C10orf55Q5SWW7 151 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 PLXNA3P51805 1871 aa7.1□□□□□ -1.27
NIPBL-201ENST00000282516 ADAMTS7Q9UKP4 1686 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 BUB1B-PAK6H3BSN5 160 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 DSCAMO60469 2012 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 IGKV1D-43A0A0B4J1Z2 117 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 HLA-DRB4P13762 266 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 CEND1Q8N111 149 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 LYZL4Q96KX0 146 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 SIGLEC9Q9Y336 463 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 HLA-DRB4X5D2U9 266 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 PSPNO60542 156 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 ZNF672Q499Z4 452 aaPredicted RBP7.09□□□□□ -1.27
NIPBL-201ENST00000282516 TINCRA0A1B0GVN0 87 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 A0A1W2PPM0 123 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 K7EP13 123 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 CRYGCP07315 174 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 ZNF837Q96EG3 531 aaPredicted RBP7.09□□□□□ -1.27
NIPBL-201ENST00000282516 PCDH15Q96QU1 1955 aa7.09□□□□□ -1.27
NIPBL-201ENST00000282516 PRB4P10163 310 aaPredicted RBP7.09□□□□□ -1.28
NIPBL-201ENST00000282516 HGFACQ04756 655 aa7.09□□□□□ -1.28
NIPBL-201ENST00000282516 ETDBQ3ZM63 59 aa7.09□□□□□ -1.28
NIPBL-201ENST00000282516 MDS2Q8NDY4 140 aa7.09□□□□□ -1.28
NIPBL-201ENST00000282516 IGKV1-9A0A0C4DH69 117 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 FAM104BQ5XKR9 115 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 RPP25LQ8N5L8 163 aaKnown RBP7.08□□□□□ -1.28
NIPBL-201ENST00000282516 GATA3P23771 443 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 PRR31Q5SQ13 230 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 TECTAO75443 2155 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 SHISA3A0PJX4 238 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 LYNX1G3V0Z9 82 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 LYNX1P0DP58 116 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 DKK4Q9UBT3 224 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 SDHAF1A6NFY7 115 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 NTN3O00634 580 aaPredicted RBP7.08□□□□□ -1.28
NIPBL-201ENST00000282516 NXPH4O95158 308 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 KNCNA6PVL3 124 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 CFHR2P36980 270 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 SMIM20Q8N5G0 67 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 PRSS57Q6UWY2 283 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 CRYBA4P53673 196 aa7.08□□□□□ -1.28
NIPBL-201ENST00000282516 MCRIP2Q9BUT9 160 aaKnown RBP7.08□□□□□ -1.28
NIPBL-201ENST00000282516 ZNF362Q5T0B9 420 aaPredicted RBP7.08□□□□□ -1.28
NIPBL-201ENST00000282516 LINC01619G3V211 115 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 CFHR3Q02985 330 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 A0A0A6YYD4 124 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 TRBV6-6A0A0A6YYG2 114 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 IGKV1-5P01602 117 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 ARMS2P0C7Q2 107 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 COLQQ9Y215 455 aaPredicted RBP7.07□□□□□ -1.28
NIPBL-201ENST00000282516 IGHV1OR15-1A0A075B7D0 117 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 A8MWP6 167 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 J3QQQ9 107 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 ETDCA0A1B0GVM5 59 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 A0A1B0GX51 115 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 OVOL3O00110 214 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 COX8AP10176 69 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 LAIR2Q6ISS4 152 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 SPRR3Q9UBC9 169 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 ATOX1O00244 68 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 GATA4P43694 442 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 PYY3Q5JQD4 70 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 HS3ST6Q96QI5 342 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 GPR179Q6PRD1 2367 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 C2orf16Q68DN1 1984 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 TFF1P04155 84 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 ZNF134P52741 427 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 C15orf53Q8NAA6 179 aa7.07□□□□□ -1.28
NIPBL-201ENST00000282516 CDKN1BP46527 198 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 XCL2Q9UBD3 114 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 C18orf32Q8TCD1 76 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 IGHV3-16A0A0C4DH30 117 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 POLR3KQ9Y2Y1 108 aaPredicted RBP7.06□□□□□ -1.28
NIPBL-201ENST00000282516 DEFB131AP59861 70 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 BRD3OSQ6XYD6 125 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms