RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 C16orf92Q96LL3 132 aa13.76□□□□□ -0.21
CAPN1-201ENST00000279247 S100A7P31151 101 aa13.76□□□□□ -0.21
CAPN1-201ENST00000279247 HOXA3O43365 443 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-201ENST00000279247 AMTP48728 403 aa13.75□□□□□ -0.21
CAPN1-201ENST00000279247 LOXL1Q08397 574 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-201ENST00000279247 KRTAP1-3Q8IUG1 177 aa13.75□□□□□ -0.21
CAPN1-201ENST00000279247 ORM1P02763 201 aa13.74□□□□□ -0.21
CAPN1-201ENST00000279247 JOSD1Q15040 202 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-201ENST00000279247 TMEM189A5PLL7 270 aa13.74□□□□□ -0.21
CAPN1-201ENST00000279247 CRIP2P52943 208 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-201ENST00000279247 COX19Q49B96 90 aa13.74□□□□□ -0.21
CAPN1-201ENST00000279247 TIMM8BQ9Y5J9 83 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-201ENST00000279247 NPIPB6E9PJ23 425 aa13.73□□□□□ -0.21
CAPN1-201ENST00000279247 FAM162BQ5T6X4 162 aa13.73□□□□□ -0.21
CAPN1-201ENST00000279247 RNASEKQ6P5S7 137 aaKnown RBP13.73□□□□□ -0.21
CAPN1-201ENST00000279247 WFDC3Q8IUB2 231 aa13.73□□□□□ -0.21
CAPN1-201ENST00000279247 C18orf32Q8TCD1 76 aa13.73□□□□□ -0.21
CAPN1-201ENST00000279247 NPFFR1Q9GZQ6 430 aa13.73□□□□□ -0.21
CAPN1-201ENST00000279247 A0A1B0GXF2 115 aa13.73□□□□□ -0.21
CAPN1-201ENST00000279247 Q6ZWC4 215 aa13.73□□□□□ -0.21
CAPN1-201ENST00000279247 SIGLECL1Q8N7X8 197 aa13.73□□□□□ -0.21
CAPN1-201ENST00000279247 PRDM13Q9H4Q3 707 aa13.73□□□□□ -0.21
CAPN1-201ENST00000279247 TRAV8-2A0A0B4J237 113 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 SERTM2A0A1B0GWG4 89 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 KLK9Q2XQG4 91 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 CT83Q5H943 113 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 Q6ZQT7 251 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 USMG5Q96IX5 58 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 KLK9Q9UKQ9 250 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 RPLP1P05386 114 aaKnown RBP13.72□□□□□ -0.21
CAPN1-201ENST00000279247 CSN3P07498 182 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 KRTDAPP60985 99 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 J3QLI3 93 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 Q0VG73 95 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 ZNF738Q8NE65 137 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 OR4B1Q8NGF8 309 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 WIPF2Q8TF74 440 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-201ENST00000279247 GLMPQ8WWB7 406 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 NDFIP1Q9BT67 221 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 RNF114Q9Y508 228 aa13.72□□□□□ -0.21
CAPN1-201ENST00000279247 A0A1B0GUT8 65 aa13.71□□□□□ -0.21
CAPN1-201ENST00000279247 ZNF138P52744 262 aa13.71□□□□□ -0.21
CAPN1-201ENST00000279247 PMCHL1Q16048 86 aa13.71□□□□□ -0.21
CAPN1-201ENST00000279247 SAPCD1Q5SSQ6 148 aa13.71□□□□□ -0.21
CAPN1-201ENST00000279247 LYZL1Q6UWQ5 148 aa13.71□□□□□ -0.21
CAPN1-201ENST00000279247 AGPAT4-IT1Q9H0P7 198 aa13.71□□□□□ -0.21
CAPN1-201ENST00000279247 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.71□□□□□ -0.22
CAPN1-201ENST00000279247 A0A0G2JLM5 398 aa13.71□□□□□ -0.22
CAPN1-201ENST00000279247 A0A1W2PS18 150 aa13.71□□□□□ -0.22
CAPN1-201ENST00000279247 TMEM213A2RRL7 107 aa13.71□□□□□ -0.22
CAPN1-201ENST00000279247 A8MWP6 167 aa13.71□□□□□ -0.22
CAPN1-201ENST00000279247 TFPI2P48307 235 aa13.71□□□□□ -0.22
CAPN1-201ENST00000279247 ATP5L2Q7Z4Y8 100 aa13.71□□□□□ -0.22
CAPN1-201ENST00000279247 NDUFA4O00483 81 aa13.7□□□□□ -0.22
CAPN1-201ENST00000279247 IGLV1-40P01703 118 aa13.7□□□□□ -0.22
CAPN1-201ENST00000279247 SLC50A1Q9BRV3 221 aa13.7□□□□□ -0.22
CAPN1-201ENST00000279247 ALKBH7Q9BT30 221 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-201ENST00000279247 F6UB75 175 aa13.7□□□□□ -0.22
CAPN1-201ENST00000279247 S100A12P80511 92 aa13.7□□□□□ -0.22
CAPN1-201ENST00000279247 C20orf173Q96LM9 149 aa13.7□□□□□ -0.22
CAPN1-201ENST00000279247 RHPN1-AS1Q9BWJ2 59 aa13.7□□□□□ -0.22
CAPN1-201ENST00000279247 VPREB3Q9UKI3 123 aa13.7□□□□□ -0.22
CAPN1-201ENST00000279247 TRBV6-1A0A0K0K1D8 114 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 C1orf194Q5T5A4 169 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 C16orf54Q6UWD8 224 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 GFRA4Q9GZZ7 299 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 FAM181BA6NEQ2 426 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 TMEM78Q5T7P6 136 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 RASL11AQ6T310 242 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 HSBP1O75506 76 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 OR10J3Q5JRS4 329 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 WFDC12Q8WWY7 111 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 KCNS1Q96KK3 526 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 PEF1Q9UBV8 284 aaKnown RBP13.69□□□□□ -0.22
CAPN1-201ENST00000279247 U3KQE9 123 aa13.69□□□□□ -0.22
CAPN1-201ENST00000279247 OTOGQ6ZRI0 2925 aa13.68□□□□□ -0.22
CAPN1-201ENST00000279247 A0A087X0K7 114 aa13.68□□□□□ -0.22
CAPN1-201ENST00000279247 BORCS7Q96B45 105 aa13.68□□□□□ -0.22
CAPN1-201ENST00000279247 CLEC5AQ9NY25 188 aa13.68□□□□□ -0.22
CAPN1-201ENST00000279247 GPX1P07203 203 aa13.67□□□□□ -0.22
CAPN1-201ENST00000279247 KHDC1LQ5JSQ8 128 aa13.67□□□□□ -0.22
CAPN1-201ENST00000279247 CYB5R2Q6BCY4 276 aa13.67□□□□□ -0.22
CAPN1-201ENST00000279247 TMEM190Q8WZ59 177 aa13.67□□□□□ -0.22
CAPN1-201ENST00000279247 NRN1Q9NPD7 142 aa13.67□□□□□ -0.22
CAPN1-201ENST00000279247 NAGKQ9UJ70 344 aa13.67□□□□□ -0.22
CAPN1-201ENST00000279247 NOTCH3Q9UM47 2321 aa13.67□□□□□ -0.22
CAPN1-201ENST00000279247 PSMB8P28062 276 aa13.66□□□□□ -0.22
CAPN1-201ENST00000279247 PAFAH1B2P68402 229 aa13.66□□□□□ -0.22
CAPN1-201ENST00000279247 CFHR3Q02985 330 aa13.66□□□□□ -0.22
CAPN1-201ENST00000279247 RIGQ13278 110 aa13.66□□□□□ -0.22
CAPN1-201ENST00000279247 Q6YL49 198 aa13.66□□□□□ -0.22
CAPN1-201ENST00000279247 AGRNO00468 2067 aa13.66□□□□□ -0.22
CAPN1-201ENST00000279247 H3BUA1 57 aa13.66□□□□□ -0.22
CAPN1-201ENST00000279247 ZNF324O75467 553 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-201ENST00000279247 FOXE3Q13461 319 aa13.66□□□□□ -0.22
CAPN1-201ENST00000279247 GPHB5Q86YW7 130 aa13.66□□□□□ -0.22
CAPN1-201ENST00000279247 ZNF664Q8N3J9 261 aa13.66□□□□□ -0.22
CAPN1-201ENST00000279247 DEFB136Q30KP8 78 aa13.66□□□□□ -0.22
CAPN1-201ENST00000279247 DAZ1Q9NQZ3 744 aaKnown RBP13.66□□□□□ -0.22
CAPN1-201ENST00000279247 MSRB1Q9NZV6 116 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms