RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CSN1S1P47710 185 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 BTN1A1Q13410 526 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 PDE6HQ13956 83 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 FAM122CQ6P4D5 195 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 MAPKAPK5-AS1Q8N8E1 139 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 KCNIP2Q9NS61 270 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 TMEM14CQ9P0S9 112 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 FUT9Q9Y231 359 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 NACAE9PAV3 2078 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 IGSF23A1L1A6 192 aa8.51□□□□□ -1.05
TRAF4-202ENST00000262396 C17orf112F2Z3M2 114 aa8.51□□□□□ -1.05
TRAF4-202ENST00000262396 PAX4O43316 350 aa8.51□□□□□ -1.05
TRAF4-202ENST00000262396 ICAM4Q14773 271 aa8.51□□□□□ -1.05
TRAF4-202ENST00000262396 ESRGQ1W209 222 aa8.51□□□□□ -1.05
TRAF4-202ENST00000262396 EXOC3-AS1Q8N2X6 119 aa8.51□□□□□ -1.05
TRAF4-202ENST00000262396 ENKURQ8TC29 256 aa8.51□□□□□ -1.05
TRAF4-202ENST00000262396 CCDC32Q9BV29 185 aa8.51□□□□□ -1.05
TRAF4-202ENST00000262396 Q9H3A6 140 aa8.51□□□□□ -1.05
TRAF4-202ENST00000262396 PTTG2Q9NZH5 202 aa8.51□□□□□ -1.05
TRAF4-202ENST00000262396 MRPS16Q9Y3D3 137 aaKnown RBP8.51□□□□□ -1.05
TRAF4-202ENST00000262396 ICOSQ9Y6W8 199 aa8.51□□□□□ -1.05
TRAF4-202ENST00000262396 DNAH11Q96DT5 4516 aa8.5□□□□□ -1.05
TRAF4-202ENST00000262396 IGKV2-40A0A087WW87 121 aaPredicted RBP8.5□□□□□ -1.05
TRAF4-202ENST00000262396 A0A1W2PPQ1 181 aa8.5□□□□□ -1.05
TRAF4-202ENST00000262396 IGKV2D-40P01614 121 aaPredicted RBP8.5□□□□□ -1.05
TRAF4-202ENST00000262396 IGHV3-53P01767 116 aa8.5□□□□□ -1.05
TRAF4-202ENST00000262396 VWC2Q2TAL6 325 aa8.5□□□□□ -1.05
TRAF4-202ENST00000262396 LRRC37A5PQ49AS3 106 aa8.5□□□□□ -1.05
TRAF4-202ENST00000262396 LINC00612Q8N6U2 182 aa8.5□□□□□ -1.05
TRAF4-202ENST00000262396 THAP6Q8TBB0 222 aa8.5□□□□□ -1.05
TRAF4-202ENST00000262396 NPCDR1Q9BY65 106 aa8.5□□□□□ -1.05
TRAF4-202ENST00000262396 AGPAT4-IT1Q9H0P7 198 aa8.5□□□□□ -1.05
TRAF4-202ENST00000262396 OR51M1Q9H341 326 aa8.5□□□□□ -1.05
TRAF4-202ENST00000262396 A6NHS1 94 aa8.49□□□□□ -1.05
TRAF4-202ENST00000262396 OR7C2O60412 319 aa8.49□□□□□ -1.05
TRAF4-202ENST00000262396 CDK2AP2O75956 126 aa8.49□□□□□ -1.05
TRAF4-202ENST00000262396 NBEAP1P0C6P0 100 aa8.49□□□□□ -1.05
TRAF4-202ENST00000262396 CD300CQ08708 224 aa8.49□□□□□ -1.05
TRAF4-202ENST00000262396 ZNF415Q09FC8 603 aa8.49□□□□□ -1.05
TRAF4-202ENST00000262396 SLAQ13239 276 aa8.49□□□□□ -1.05
TRAF4-202ENST00000262396 OR5C1Q8NGR4 320 aa8.49□□□□□ -1.05
TRAF4-202ENST00000262396 PCNPQ8WW12 178 aaKnown RBP8.49□□□□□ -1.05
TRAF4-202ENST00000262396 UPK3BQ9BT76 320 aa8.49□□□□□ -1.05
TRAF4-202ENST00000262396 PAXXQ9BUH6 204 aa8.49□□□□□ -1.05
TRAF4-202ENST00000262396 IGHV1OR15-1A0A075B7D0 117 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 TRGV4A0A0C4DH28 118 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 E5RGE8 158 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 SIVA1O15304 175 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 OR10J4P0C629 311 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 NHLH2Q02577 135 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 ANXA2RQ3ZCQ2 193 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 GCSAMLQ5JQS6 135 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 LINC00299Q6ZSB3 139 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 MIR17HGQ75NE6 70 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 CHAC2Q8WUX2 184 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 MRPL16Q9NX20 251 aaKnown RBP8.48□□□□□ -1.05
TRAF4-202ENST00000262396 KLF12Q9Y4X4 402 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 DYNC1H1Q14204 4646 aaKnown RBP8.48□□□□□ -1.05
TRAF4-202ENST00000262396 PKD1P98161 4303 aa8.48□□□□□ -1.05
TRAF4-202ENST00000262396 TRAV9-2A0A087WT02 112 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 A0A096LPF7 62 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 KLLNB2CW77 178 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 NDUFB4O95168 129 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 NMBP08949 121 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 BTF3P20290 206 aaKnown RBP8.47□□□□□ -1.05
TRAF4-202ENST00000262396 ZNF138P52744 262 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 TCL1AP56279 114 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 CYCSP99999 105 aaKnown RBP8.47□□□□□ -1.05
TRAF4-202ENST00000262396 IBA57Q5T440 356 aaKnown RBP8.47□□□□□ -1.05
TRAF4-202ENST00000262396 SCGB1C1Q8TD33 95 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 S100ZQ8WXG8 99 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 LINC00467Q9BRT7 94 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 SLC25A2Q9BXI2 301 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 MRPL32Q9BYC8 188 aaKnown RBP8.47□□□□□ -1.05
TRAF4-202ENST00000262396 C11orf1Q9H5F2 150 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 PRO0255Q9UI72 69 aa8.47□□□□□ -1.05
TRAF4-202ENST00000262396 MUC4Q99102 2169 aa8.46□□□□□ -1.05
TRAF4-202ENST00000262396 SPINK4O60575 86 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 ZNF324O75467 553 aaPredicted RBP8.46□□□□□ -1.06
TRAF4-202ENST00000262396 NXPH4O95158 308 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 SIX6O95475 246 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 IFNA5P01569 189 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 ERVFC1-1P60608 527 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 RANP62826 216 aaKnown RBP8.46□□□□□ -1.06
TRAF4-202ENST00000262396 UBE2L3P68036 154 aaKnown RBP8.46□□□□□ -1.06
TRAF4-202ENST00000262396 MRPL23Q16540 153 aaKnown RBP8.46□□□□□ -1.06
TRAF4-202ENST00000262396 MUC21Q5SSG8 566 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 FAM159AQ6UWV7 190 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 C9orf47Q6ZRZ4 202 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 VSIG2Q96IQ7 327 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 ST6GAL2Q96JF0 529 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 C8orf49Q96NF6 230 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 VGLL1Q99990 258 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 ZNF492Q9P255 531 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 NAGKQ9UJ70 344 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 RPH3ALQ9UNE2 315 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 HHLA3Q9XRX5 114 aa8.46□□□□□ -1.06
TRAF4-202ENST00000262396 PET100P0DJ07 73 aa8.45□□□□□ -1.06
TRAF4-202ENST00000262396 CRISP2P16562 243 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms