RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 RBMY1CP0DJD4 496 aa10.98□□□□□ -0.65
CDH1-201ENST00000261769 GFI1BQ5VTD9 330 aa10.98□□□□□ -0.65
CDH1-201ENST00000261769 ZNF491Q8N8L2 437 aa10.98□□□□□ -0.65
CDH1-201ENST00000261769 Q8N9W7 124 aa10.98□□□□□ -0.65
CDH1-201ENST00000261769 TNFRSF13BO14836 293 aaPredicted RBP10.98□□□□□ -0.65
CDH1-201ENST00000261769 RNASE1P07998 156 aaKnown RBP10.98□□□□□ -0.65
CDH1-201ENST00000261769 PCP4P48539 62 aa10.98□□□□□ -0.65
CDH1-201ENST00000261769 Q8N7P7 452 aa10.98□□□□□ -0.65
CDH1-201ENST00000261769 LINC00587B1AMM8 73 aa10.98□□□□□ -0.65
CDH1-201ENST00000261769 GP9P14770 177 aa10.98□□□□□ -0.65
CDH1-201ENST00000261769 DEFB136Q30KP8 78 aa10.98□□□□□ -0.65
CDH1-201ENST00000261769 SPXQ9BT56 116 aa10.98□□□□□ -0.65
CDH1-201ENST00000261769 ATOH7Q8N100 152 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 DOCK11Q5JSL3 2073 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 DPM2O94777 84 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 AZU1P20160 251 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 TRPT1Q86TN4 253 aaKnown RBP10.97□□□□□ -0.65
CDH1-201ENST00000261769 FAM19A2Q8N3H0 131 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 APOMO95445 188 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 FABP2P12104 132 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 COL5A1-AS1Q5SY13 56 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 ZNF492Q9P255 531 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 A0A087WWL8 130 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 D6R8Y8 96 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 CD5LO43866 347 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 SRSF3P84103 164 aaKnown RBP10.97□□□□□ -0.65
CDH1-201ENST00000261769 TEX43Q6ZNM6 134 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 WFDC11Q8NEX6 87 aa10.97□□□□□ -0.65
CDH1-201ENST00000261769 TRBV24-1A0A075B6N3 115 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 FSTL3O95633 263 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 C1orf159Q96HA4 380 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 GAGE12BA1L429 117 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 SERF1AO75920 110 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 GAGE7O76087 117 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 NCR2O95944 276 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 GAGE12FP0CL80 117 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 GAGE12GP0CL81 117 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 GAGE12IP0CL82 117 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 MORN3Q6PF18 240 aaPredicted RBP10.96□□□□□ -0.65
CDH1-201ENST00000261769 IFI27L1Q96BM0 104 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 GFRA4Q9GZZ7 299 aa10.96□□□□□ -0.65
CDH1-201ENST00000261769 TRBV7-9A0A0J9YWB2 115 aa10.96□□□□□ -0.66
CDH1-201ENST00000261769 KLK9Q9UKQ9 250 aa10.96□□□□□ -0.66
CDH1-201ENST00000261769 LAMTOR2Q9Y2Q5 125 aa10.96□□□□□ -0.66
CDH1-201ENST00000261769 IGHG2P01859 326 aa10.96□□□□□ -0.66
CDH1-201ENST00000261769 ADMP35318 185 aa10.96□□□□□ -0.66
CDH1-201ENST00000261769 SS18Q15532 418 aa10.96□□□□□ -0.66
CDH1-201ENST00000261769 DMRTA1Q5VZB9 504 aa10.96□□□□□ -0.66
CDH1-201ENST00000261769 TMEM256Q8N2U0 113 aa10.96□□□□□ -0.66
CDH1-201ENST00000261769 MRAPQ8TCY5 172 aa10.96□□□□□ -0.66
CDH1-201ENST00000261769 CHTOPQ9Y3Y2 248 aaKnown RBP10.96□□□□□ -0.66
CDH1-201ENST00000261769 CSTL1Q9H114 145 aa10.95□□□□□ -0.66
CDH1-201ENST00000261769 ABCA2Q9BZC7 2435 aa10.95□□□□□ -0.66
CDH1-201ENST00000261769 TRAV9-2A0A087WT02 112 aa10.95□□□□□ -0.66
CDH1-201ENST00000261769 FAM231BA6NCW3 169 aa10.95□□□□□ -0.66
CDH1-201ENST00000261769 PRR25Q96S07 402 aa10.95□□□□□ -0.66
CDH1-201ENST00000261769 SLURP1P55000 103 aa10.95□□□□□ -0.66
CDH1-201ENST00000261769 ZNF114Q8NC26 417 aa10.95□□□□□ -0.66
CDH1-201ENST00000261769 NUP35Q8NFH5 326 aa10.95□□□□□ -0.66
CDH1-201ENST00000261769 AJUBAQ96IF1 538 aa10.95□□□□□ -0.66
CDH1-201ENST00000261769 WIPF3A6NGB9 483 aa10.95□□□□□ -0.66
CDH1-201ENST00000261769 SLC25A2Q9BXI2 301 aa10.95□□□□□ -0.66
CDH1-201ENST00000261769 LSM4Q9Y4Z0 139 aaKnown RBP10.95□□□□□ -0.66
CDH1-201ENST00000261769 FNDC4Q9H6D8 234 aaPredicted RBP10.94□□□□□ -0.66
CDH1-201ENST00000261769 IGLV11-55A0A075B6I3 123 aa10.94□□□□□ -0.66
CDH1-201ENST00000261769 PLA2G2AP14555 144 aa10.94□□□□□ -0.66
CDH1-201ENST00000261769 LINC00479Q96M42 142 aa10.94□□□□□ -0.66
CDH1-201ENST00000261769 CEP295Q9C0D2 2601 aa10.94□□□□□ -0.66
CDH1-201ENST00000261769 TEX48A0A1B0GUV7 120 aa10.94□□□□□ -0.66
CDH1-201ENST00000261769 EREGO14944 169 aa10.94□□□□□ -0.66
CDH1-201ENST00000261769 SLC25A20O43772 301 aa10.94□□□□□ -0.66
CDH1-201ENST00000261769 IGHV4-31P0DP07 118 aa10.94□□□□□ -0.66
CDH1-201ENST00000261769 NIT1Q86X76 327 aa10.94□□□□□ -0.66
CDH1-201ENST00000261769 MRPL53Q96EL3 112 aaKnown RBP10.94□□□□□ -0.66
CDH1-201ENST00000261769 DENND4AQ7Z401 1863 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 CEP192Q8TEP8 1941 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 PLNP26678 52 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 CFHR3Q02985 330 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 ARL6IP6Q8N6S5 226 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 PHLDA1Q8WV24 401 aaPredicted RBP10.93□□□□□ -0.66
CDH1-201ENST00000261769 RASL10AQ92737 203 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 RMI2Q96E14 147 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 GAGE12JA6NER3 117 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 DNAJC9-AS1A6NH13 148 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 GAGE1Q13065 139 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 GAGE4Q13068 117 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 GAGE5Q13069 117 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 GAGE13Q4V321 117 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 CT83Q5H943 113 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 DSCAMO60469 2012 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 TRAV12-2A0A075B6T6 113 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 INSL3P51460 131 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 LENEPQ9Y5L5 61 aa10.93□□□□□ -0.66
CDH1-201ENST00000261769 PYGO2Q9BRQ0 406 aa10.92□□□□□ -0.66
CDH1-201ENST00000261769 TRBV25-1A0A075B6N4 114 aa10.92□□□□□ -0.66
CDH1-201ENST00000261769 A6NDX4 124 aa10.92□□□□□ -0.66
CDH1-201ENST00000261769 HAPLN4Q86UW8 402 aa10.92□□□□□ -0.66
CDH1-201ENST00000261769 IGFBPL1Q8WX77 278 aa10.92□□□□□ -0.66
CDH1-201ENST00000261769 TRAV25A0A0B4J276 109 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms