RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 PIP4P2Q8N4L2 257 aa19.78■□□□□ 0.76
RAB40C-201ENST00000248139 GATD1Q8NB37 220 aa19.78■□□□□ 0.76
RAB40C-201ENST00000248139 OR10AG1Q8NH19 301 aa19.78■□□□□ 0.76
RAB40C-201ENST00000248139 A0A087X0K7 114 aa19.77■□□□□ 0.76
RAB40C-201ENST00000248139 FOSL1P15407 271 aa19.77■□□□□ 0.76
RAB40C-201ENST00000248139 Q6AWC8 147 aa19.77■□□□□ 0.76
RAB40C-201ENST00000248139 SAPCD1Q5SSQ6 148 aa19.77■□□□□ 0.75
RAB40C-201ENST00000248139 FER1L6-AS1Q8NA97 138 aa19.77■□□□□ 0.75
RAB40C-201ENST00000248139 ZNF502Q8TBZ5 544 aa19.77■□□□□ 0.75
RAB40C-201ENST00000248139 SCRT2Q9NQ03 307 aa19.77■□□□□ 0.75
RAB40C-201ENST00000248139 LINC01545Q5VT33 79 aa19.76■□□□□ 0.75
RAB40C-201ENST00000248139 IGHV2-70DA0A0C4DH43 119 aa19.76■□□□□ 0.75
RAB40C-201ENST00000248139 NPYP01303 97 aa19.76■□□□□ 0.75
RAB40C-201ENST00000248139 Q6ZQT7 251 aa19.75■□□□□ 0.75
RAB40C-201ENST00000248139 ORMDL3Q8N138 153 aa19.75■□□□□ 0.75
RAB40C-201ENST00000248139 COL25A1Q9BXS0 654 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-201ENST00000248139 COX11Q9Y6N1 276 aa19.75■□□□□ 0.75
RAB40C-201ENST00000248139 A0A1B0GW15 77 aa19.75■□□□□ 0.75
RAB40C-201ENST00000248139 CKS2P33552 79 aa19.75■□□□□ 0.75
RAB40C-201ENST00000248139 IL17RELQ6ZVW7 336 aa19.75■□□□□ 0.75
RAB40C-201ENST00000248139 CCDC140Q96MF4 163 aa19.75■□□□□ 0.75
RAB40C-201ENST00000248139 ZFAND3Q9H8U3 227 aa19.75■□□□□ 0.75
RAB40C-201ENST00000248139 PTTG1IPP53801 180 aa19.74■□□□□ 0.75
RAB40C-201ENST00000248139 CSMD2Q7Z408 3487 aa19.74■□□□□ 0.75
RAB40C-201ENST00000248139 OOSP1A8MZH6 123 aa19.74■□□□□ 0.75
RAB40C-201ENST00000248139 BUB3O43684 328 aa19.74■□□□□ 0.75
RAB40C-201ENST00000248139 C19orf84I3L1E1 186 aa19.73■□□□□ 0.75
RAB40C-201ENST00000248139 UQCRFS1P47985 274 aa19.73■□□□□ 0.75
RAB40C-201ENST00000248139 UCNP55089 124 aa19.73■□□□□ 0.75
RAB40C-201ENST00000248139 UBE2E1P51965 193 aa19.73■□□□□ 0.75
RAB40C-201ENST00000248139 FAM110DQ8TAY7 271 aaPredicted RBP19.73■□□□□ 0.75
RAB40C-201ENST00000248139 CLPSL1A2RUU4 121 aa19.72■□□□□ 0.75
RAB40C-201ENST00000248139 PRSS57Q6UWY2 283 aa19.72■□□□□ 0.75
RAB40C-201ENST00000248139 ABCA2Q9BZC7 2435 aa19.72■□□□□ 0.75
RAB40C-201ENST00000248139 LMO4P61968 165 aa19.72■□□□□ 0.75
RAB40C-201ENST00000248139 CRYBG3Q68DQ2 2970 aa19.72■□□□□ 0.75
RAB40C-201ENST00000248139 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.71■□□□□ 0.75
RAB40C-201ENST00000248139 GATA1P15976 413 aaPredicted RBP19.71■□□□□ 0.75
RAB40C-201ENST00000248139 ZNF738Q8NE65 137 aa19.71■□□□□ 0.75
RAB40C-201ENST00000248139 EVI2AP22794 236 aa19.7■□□□□ 0.74
RAB40C-201ENST00000248139 ORAOV1Q8WV07 137 aa19.7■□□□□ 0.74
RAB40C-201ENST00000248139 U3KQK5 164 aa19.7■□□□□ 0.74
RAB40C-201ENST00000248139 IGLC6P0CF74 106 aa19.7■□□□□ 0.74
RAB40C-201ENST00000248139 CACNG7P62955 275 aa19.7■□□□□ 0.74
RAB40C-201ENST00000248139 ANKRD39Q53RE8 183 aa19.7■□□□□ 0.74
RAB40C-201ENST00000248139 BVES-AS1Q5T3Y7 98 aa19.7■□□□□ 0.74
RAB40C-201ENST00000248139 BMI1P35226 326 aa19.69■□□□□ 0.74
RAB40C-201ENST00000248139 C18orf15Q96N68 181 aa19.69■□□□□ 0.74
RAB40C-201ENST00000248139 C11orf21Q9P2W6 132 aa19.69■□□□□ 0.74
RAB40C-201ENST00000248139 SELENOKQ9Y6D0 94 aa19.69■□□□□ 0.74
RAB40C-201ENST00000248139 EFNA4P52798 201 aa19.69■□□□□ 0.74
RAB40C-201ENST00000248139 CENPVL3A0A0U1RRI6 287 aa19.68■□□□□ 0.74
RAB40C-201ENST00000248139 SCGB2A1O75556 95 aa19.68■□□□□ 0.74
RAB40C-201ENST00000248139 BRD3OSQ6XYD6 125 aa19.68■□□□□ 0.74
RAB40C-201ENST00000248139 CBY3A6NI87 242 aa19.68■□□□□ 0.74
RAB40C-201ENST00000248139 NHLH1Q02575 133 aa19.68■□□□□ 0.74
RAB40C-201ENST00000248139 COX8CQ7Z4L0 72 aa19.68■□□□□ 0.74
RAB40C-201ENST00000248139 FABP5P3A8MUU1 101 aa19.67■□□□□ 0.74
RAB40C-201ENST00000248139 AGPAT4-IT1Q9H0P7 198 aa19.67■□□□□ 0.74
RAB40C-201ENST00000248139 GOSR1O95249 250 aa19.67■□□□□ 0.74
RAB40C-201ENST00000248139 RNF185Q96GF1 192 aa19.67■□□□□ 0.74
RAB40C-201ENST00000248139 NPFFO15130 113 aa19.66■□□□□ 0.74
RAB40C-201ENST00000248139 J3KRW8 73 aa19.66■□□□□ 0.74
RAB40C-201ENST00000248139 PSMG3-AS1Q96PY0 264 aa19.66■□□□□ 0.74
RAB40C-201ENST00000248139 UTP20O75691 2785 aaKnown RBP19.65■□□□□ 0.74
RAB40C-201ENST00000248139 IGKV3D-20A0A0C4DH25 116 aa19.65■□□□□ 0.74
RAB40C-201ENST00000248139 TAX1BP3O14907 124 aa19.65■□□□□ 0.74
RAB40C-201ENST00000248139 C2orf91Q6ZV80 131 aa19.65■□□□□ 0.74
RAB40C-201ENST00000248139 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.65■□□□□ 0.744e-6■■■■□ 21.3
RAB40C-201ENST00000248139 TRAV8-2A0A0B4J237 113 aa19.64■□□□□ 0.73
RAB40C-201ENST00000248139 UBE2V1Q13404 147 aa19.64■□□□□ 0.73
RAB40C-201ENST00000248139 VAMP3Q15836 100 aa19.64■□□□□ 0.73
RAB40C-201ENST00000248139 TMEM190Q8WZ59 177 aa19.64■□□□□ 0.73
RAB40C-201ENST00000248139 SPRY2O43597 315 aa19.64■□□□□ 0.73
RAB40C-201ENST00000248139 DEFB1P60022 68 aa19.64■□□□□ 0.73
RAB40C-201ENST00000248139 PAX8Q06710 450 aa19.64■□□□□ 0.73
RAB40C-201ENST00000248139 MS4A6AQ9H2W1 248 aa19.64■□□□□ 0.73
RAB40C-201ENST00000248139 HBDP02042 147 aa19.63■□□□□ 0.73
RAB40C-201ENST00000248139 COX8AP10176 69 aa19.63■□□□□ 0.73
RAB40C-201ENST00000248139 TRGV3P03979 118 aa19.62■□□□□ 0.73
RAB40C-201ENST00000248139 C5orf56Q8N8D9 126 aa19.62■□□□□ 0.73
RAB40C-201ENST00000248139 DKK2Q9UBU2 259 aa19.62■□□□□ 0.73
RAB40C-201ENST00000248139 RPS20P60866 119 aaKnown RBP19.62■□□□□ 0.73
RAB40C-201ENST00000248139 TRBV12-3P01733 135 aa19.61■□□□□ 0.73
RAB40C-201ENST00000248139 C8orf86Q6ZUL3 223 aa19.61■□□□□ 0.73
RAB40C-201ENST00000248139 CFAP46Q8IYW2 2715 aa19.61■□□□□ 0.73
RAB40C-201ENST00000248139 IGF1P05019 195 aa19.61■□□□□ 0.73
RAB40C-201ENST00000248139 EEF1AKMT3Q96AZ1 226 aa19.61■□□□□ 0.73
RAB40C-201ENST00000248139 FLNCQ14315 2725 aa19.61■□□□□ 0.73
RAB40C-201ENST00000248139 ITLN2Q8WWU7 325 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-201ENST00000248139 IFI27L1Q96BM0 104 aa19.6■□□□□ 0.73
RAB40C-201ENST00000248139 TRAV26-2A0A0B4J265 109 aa19.6■□□□□ 0.73
RAB40C-201ENST00000248139 GNLYP22749 145 aa19.6■□□□□ 0.73
RAB40C-201ENST00000248139 LY6EQ16553 131 aa19.59■□□□□ 0.73
RAB40C-201ENST00000248139 METTL26Q96S19 204 aa19.59■□□□□ 0.73
RAB40C-201ENST00000248139 RNASE8Q8TDE3 154 aaKnown RBP19.59■□□□□ 0.73
RAB40C-201ENST00000248139 IGHV4-39P01824 125 aa19.58■□□□□ 0.73
RAB40C-201ENST00000248139 HIST1H1AQ02539 215 aaPredicted RBP19.58■□□□□ 0.73
RAB40C-201ENST00000248139 CSPG4Q6UVK1 2322 aa19.58■□□□□ 0.72
RAB40C-201ENST00000248139 TNFRSF6BO95407 300 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms