RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 RHPN1-AS1Q9BWJ2 59 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 A8MWP6 167 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 SH2D1AO60880 128 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 ESDP10768 282 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 RAB4BP61018 213 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 TM4SF20Q53R12 229 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 SAMD13Q5VXD3 122 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 REC114Q7Z4M0 266 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 ASCL2Q99929 193 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 NRN1Q9NPD7 142 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 CSMD1Q96PZ7 3565 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 LGALS9O00182 355 aa10.88□□□□□ -0.67
RTFDC1-201ENST00000023939 AMBPP02760 352 aa10.88□□□□□ -0.67
RTFDC1-201ENST00000023939 RPS20P60866 119 aaKnown RBP10.88□□□□□ -0.67
RTFDC1-201ENST00000023939 PDZD11Q5EBL8 140 aa10.88□□□□□ -0.67
RTFDC1-201ENST00000023939 OR10J3Q5JRS4 329 aa10.88□□□□□ -0.67
RTFDC1-201ENST00000023939 Q8TAT8 98 aa10.88□□□□□ -0.67
RTFDC1-201ENST00000023939 PGLYRP4Q96LB8 373 aa10.88□□□□□ -0.67
RTFDC1-201ENST00000023939 AGPAT4-IT1Q9H0P7 198 aa10.88□□□□□ -0.67
RTFDC1-201ENST00000023939 LENEPQ9Y5L5 61 aa10.88□□□□□ -0.67
RTFDC1-201ENST00000023939 HECTD1Q9ULT8 2610 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 A0A1B0GW15 77 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 PRB4P10163 310 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 FABP4P15090 132 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 ZNF138P52744 262 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 ERCC8Q13216 396 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 GATD1Q8NB37 220 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 OR10D4PQ8NGN7 298 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 TP53TG3Q9ULZ0 132 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 TMEM189A5PLL7 270 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 OVOL1O14753 267 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 SLAQ13239 276 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 IL17RELQ6ZVW7 336 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 TMEM18Q96B42 140 aa10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 PACRGQ96M98 296 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-201ENST00000023939 A0A1B0GUT8 65 aa10.86□□□□□ -0.67
RTFDC1-201ENST00000023939 GRIFINA4D1Z8 144 aa10.86□□□□□ -0.67
RTFDC1-201ENST00000023939 FABP5P3A8MUU1 101 aa10.86□□□□□ -0.67
RTFDC1-201ENST00000023939 GZMBP10144 247 aa10.86□□□□□ -0.67
RTFDC1-201ENST00000023939 ZNF80P51504 273 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-201ENST00000023939 DNLZQ5SXM8 178 aa10.86□□□□□ -0.67
RTFDC1-201ENST00000023939 TMEM78Q5T7P6 136 aa10.86□□□□□ -0.67
RTFDC1-201ENST00000023939 TMEM256Q8N2U0 113 aa10.86□□□□□ -0.67
RTFDC1-201ENST00000023939 C20orf173Q96LM9 149 aa10.86□□□□□ -0.67
RTFDC1-201ENST00000023939 CELSR1Q9NYQ6 3014 aa10.85□□□□□ -0.67
RTFDC1-201ENST00000023939 TMEM213A2RRL7 107 aa10.85□□□□□ -0.67
RTFDC1-201ENST00000023939 CAMPP49913 170 aa10.85□□□□□ -0.67
RTFDC1-201ENST00000023939 RIGQ13278 110 aa10.85□□□□□ -0.67
RTFDC1-201ENST00000023939 LINC00477Q96M19 166 aa10.85□□□□□ -0.67
RTFDC1-201ENST00000023939 TMEM160Q9NX00 188 aa10.85□□□□□ -0.67
RTFDC1-201ENST00000023939 DNAJC9-AS1A6NH13 148 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 LINC00310P59036 64 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 HIST1H1AQ02539 215 aaPredicted RBP10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 KLF5Q13887 457 aaPredicted RBP10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 KIAA1644Q3SXP7 199 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 PYY3Q5JQD4 70 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 KLHDC1Q8N7A1 406 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 ZNF738Q8NE65 137 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 DUX5Q96PT3 197 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 TRBV7-9A0A0J9YWB2 115 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 SRIP30626 198 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 SCGB2A2Q13296 93 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 LINC01559Q495D7 138 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 WFDC12Q8WWY7 111 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 YAE1D1Q9NRH1 226 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 ZANQ9Y493 2812 aa10.84□□□□□ -0.67
RTFDC1-201ENST00000023939 ITPR3Q14573 2671 aa10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 IGHV4OR15-8A0A075B7B6 117 aa10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 A0A087WW49 117 aa10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 A0A1B0GUS0 222 aa10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 NUPR1O60356 82 aa10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 SERF1AO75920 110 aa10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 CTRLP40313 264 aa10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 PAFAH1B2P68402 229 aa10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 Q6ZSV7 163 aa10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 ZNF575Q86XF7 245 aa10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 BAGE3Q86Y29 109 aa10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 ALKBH7Q9BT30 221 aaPredicted RBP10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 MAP1AP78559 2803 aaPredicted RBP10.83□□□□□ -0.68
RTFDC1-201ENST00000023939 PDZD2O15018 2839 aa10.82□□□□□ -0.68
RTFDC1-201ENST00000023939 FAM181BA6NEQ2 426 aa10.82□□□□□ -0.68
RTFDC1-201ENST00000023939 IGLC6P0CF74 106 aa10.82□□□□□ -0.68
RTFDC1-201ENST00000023939 HOXD3P31249 432 aaPredicted RBP10.82□□□□□ -0.68
RTFDC1-201ENST00000023939 OR10J6PQ8NGY7 276 aa10.82□□□□□ -0.68
RTFDC1-201ENST00000023939 BORCS7Q96B45 105 aa10.82□□□□□ -0.68
RTFDC1-201ENST00000023939 ARMS2P0C7Q2 107 aa10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 ID1P41134 155 aa10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 RPL11P62913 178 aaKnown RBP10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 ZNF493Q6ZR52 646 aa10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 DCANP1Q8TF63 244 aa10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 C4orf3Q8WVX3 66 aa10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 FAM19A4Q96LR4 140 aa10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 SSBP4Q9BWG4 385 aaPredicted RBP10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 CYSRT1A8MQ03 144 aa10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 SYNJ2BPP57105 145 aa10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 JOSD1Q15040 202 aaPredicted RBP10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 C18orf32Q8TCD1 76 aa10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 CNFNQ9BYD5 112 aa10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 ESM1Q9NQ30 184 aa10.81□□□□□ -0.68
RTFDC1-201ENST00000023939 LOC102724200A0A096LPH7 203 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms