RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 LINC01620Q4KN68 170 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 C9orf50Q5SZB4 431 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 C9JAW5 83 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 INS-IGF2F8WCM5 200 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 CD33P20138 364 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 Q8TCH9 128 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 GAGE12HA6NDE8 117 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 IGHV2-70P01814 119 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 CRYGSP22914 178 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 Q86TA4 180 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 A4D1N5 150 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 ADAMTSL5Q6ZMM2 481 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 Q6ZWC4 215 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 PAQR4Q8N4S7 273 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-201ENST00000011700 TRGV1A0A0A0MS02 117 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 UBE2E1P51965 193 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 CEND1Q8N111 149 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 AMELYQ99218 206 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 KLHDC3Q9BQ90 382 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 ZNF134P52741 427 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 TMEM243Q9BU79 118 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 TMEM256-PLSCR3K7ERE1 68 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 TBX6O95947 436 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-201ENST00000011700 PAX9P55771 341 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 SIGLEC8Q9NYZ4 499 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 SEC61GP60059 68 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 ST6GALNAC3Q8NDV1 305 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 H3BMG7 143 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 TMEM158Q8WZ71 300 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 hADV29S1A0JD25 119 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 MBD3L4A6NDZ8 208 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-201ENST00000011700 MBD3L3A6NE82 208 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-201ENST00000011700 MBD3L5A6NJ08 208 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-201ENST00000011700 PRTN3P24158 256 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 MBD3L2Q8NHZ7 208 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-201ENST00000011700 GTSF1LQ9H1H1 148 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 LYZL1Q6UWQ5 148 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 HIGD1BQ9P298 99 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 GREM1O60565 184 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 CTSBP07858 339 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 LY6EQ16553 131 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 MPV17L2Q567V2 206 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 VSIG2Q96IQ7 327 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 K7ERS5 55 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 NPYP01303 97 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 MUC7Q8TAX7 377 aa4.94□□□□□ -1.62
VPS13D-201ENST00000011700 C11orf52Q96A22 123 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 TRAV8-3A0A0A6YYJ7 113 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 KAAG1Q9UBP8 84 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 LSM4Q9Y4Z0 139 aaKnown RBP4.93□□□□□ -1.62
VPS13D-201ENST00000011700 CENPVL1A0A0U1RR11 272 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 SH2D1AO60880 128 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 RSPO4Q2I0M5 234 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-201ENST00000011700 PRRC2CQ9Y520 2896 aaKnown RBP4.93□□□□□ -1.62
VPS13D-201ENST00000011700 MUC21A0A0G2JKD1 596 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 MUC21A0A140T8X8 626 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 MUC21Q5SSG8 566 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 ZNF329Q86UD4 541 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 LYRM9A8MSI8 78 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 PPIFP30405 207 aaKnown RBP4.93□□□□□ -1.62
VPS13D-201ENST00000011700 ZFP2Q6ZN57 461 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 JMJD1CQ15652 2540 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 A0A1W2PRD5 423 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 A0A1W2PRF3 423 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 A0A1W2PRM7 423 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 CELA3AP09093 270 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 TEN1Q86WV5 123 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 SLC25A29Q8N8R3 303 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 CRYBA4P53673 196 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 C1orf159Q96HA4 380 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 A0A1W2PR77 199 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 C3orf79P0CE67 100 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 KLF5Q13887 457 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-201ENST00000011700 C2orf66Q6UXQ4 117 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 NDUFA4L2Q9NRX3 87 aa4.93□□□□□ -1.62
VPS13D-201ENST00000011700 FGF6P10767 208 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 LAIR2Q6ISS4 152 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 CFHR4Q92496 578 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 KNCNA6PVL3 124 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 FAM110DQ8TAY7 271 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-201ENST00000011700 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 H3BT86 120 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 SAP30O75446 220 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 FOXI2Q6ZQN5 318 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 C1QL2Q7Z5L3 287 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 C18orf32Q8TCD1 76 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 COA6Q5JTJ3 125 aaKnown RBP4.92□□□□□ -1.62
VPS13D-201ENST00000011700 C15orf62A8K5M9 175 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 K7EM74 188 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 IGHG2P01859 326 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 C1orf43Q9BWL3 253 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 C14orf177Q52M58 125 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 NABP1Q96AH0 204 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 IMUPQ9GZP8 106 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 TAX1BP3O14907 124 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 TMEM200BQ69YZ2 307 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 FOXL2NBQ6ZUU3 175 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 FAM216BQ8N7L0 139 aa4.92□□□□□ -1.62
VPS13D-201ENST00000011700 RPP25Q9BUL9 199 aaKnown RBP4.92□□□□□ -1.62
VPS13D-201ENST00000011700 ZNF319Q9P2F9 582 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms