RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 PRELID3AQ96N28 172 aa15.75■□□□□ 0.11
SYNGAP1-227ENST00000638142 KALRNO60229 2985 aa15.75■□□□□ 0.11
SYNGAP1-227ENST00000638142 TRAV8-6A0A0B4J262 113 aa15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 TMEM213A2RRL7 107 aa15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 F8W735 103 aaPredicted RBP15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 RPL7P18124 248 aaKnown RBP15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 ZNF562Q6V9R5 426 aa15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 ODF3BA8MYP8 253 aa15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 FAM106CPP0CH98 169 aa15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 HES1Q14469 280 aa15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 FAM106AQ4KMX7 169 aa15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 AMN1Q8IY45 258 aa15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 ARPC1AQ92747 370 aa15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 C21orf62Q9NYP8 219 aa15.74■□□□□ 0.11
SYNGAP1-227ENST00000638142 TMSB15BA0A087X1C1 80 aa15.73■□□□□ 0.11
SYNGAP1-227ENST00000638142 M0R1W7 72 aa15.73■□□□□ 0.11
SYNGAP1-227ENST00000638142 ZZEF1O43149 2961 aa15.73■□□□□ 0.11
SYNGAP1-227ENST00000638142 TMEM97Q5BJF2 176 aa15.73■□□□□ 0.11
SYNGAP1-227ENST00000638142 TTC9CQ8N5M4 171 aa15.73■□□□□ 0.11
SYNGAP1-227ENST00000638142 LOXL1Q08397 574 aaPredicted RBP15.73■□□□□ 0.11
SYNGAP1-227ENST00000638142 IGFBPL1Q8WX77 278 aa15.73■□□□□ 0.11
SYNGAP1-227ENST00000638142 PRR25Q96S07 402 aa15.73■□□□□ 0.11
SYNGAP1-227ENST00000638142 LOC389332A0A1B0GUA5 103 aa15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 C7orf71A4D174 169 aa15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 FGF6P10767 208 aa15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 LGALS9BQ3B8N2 356 aa15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 LGALS9CQ6DKI2 356 aa15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 OR8A1Q8NGG7 326 aa15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 VPS25Q9BRG1 176 aa15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 THYN1Q9P016 225 aa15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 DMXL2Q8TDJ6 3036 aa15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 IGKV2-40A0A087WW87 121 aaPredicted RBP15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 GAGE12BA1L429 117 aa15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 IGKV2D-40P01614 121 aaPredicted RBP15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 MRPL51Q4U2R6 128 aaKnown RBP15.72■□□□□ 0.11
SYNGAP1-227ENST00000638142 SCGB2A1O75556 95 aa15.71■□□□□ 0.11
SYNGAP1-227ENST00000638142 PRTN3P24158 256 aa15.71■□□□□ 0.11
SYNGAP1-227ENST00000638142 KLRD1Q13241 179 aa15.71■□□□□ 0.11
SYNGAP1-227ENST00000638142 FOXE3Q13461 319 aa15.71■□□□□ 0.11
SYNGAP1-227ENST00000638142 OR1N2Q8NGR9 330 aa15.71■□□□□ 0.11
SYNGAP1-227ENST00000638142 TPRP12270 2363 aaKnown RBP15.71■□□□□ 0.11
SYNGAP1-227ENST00000638142 SMIM15Q7Z3B0 74 aa15.71■□□□□ 0.1
SYNGAP1-227ENST00000638142 TIMD4Q96H15 378 aa15.71■□□□□ 0.1
SYNGAP1-227ENST00000638142 ATMQ13315 3056 aa15.7■□□□□ 0.1
SYNGAP1-227ENST00000638142 HBDP02042 147 aa15.7■□□□□ 0.1
SYNGAP1-227ENST00000638142 BMI1P35226 326 aa15.7■□□□□ 0.1
SYNGAP1-227ENST00000638142 NHLH1Q02575 133 aa15.7■□□□□ 0.1
SYNGAP1-227ENST00000638142 FBXL19-AS1Q494R0 122 aa15.7■□□□□ 0.1
SYNGAP1-227ENST00000638142 EGR2P11161 476 aaPredicted RBP15.69■□□□□ 0.1
SYNGAP1-227ENST00000638142 NDPQ00604 133 aa15.69■□□□□ 0.1
SYNGAP1-227ENST00000638142 CCDC144NLQ6NUI1 221 aa15.69■□□□□ 0.1
SYNGAP1-227ENST00000638142 FER1L6-AS1Q8NA97 138 aa15.69■□□□□ 0.1
SYNGAP1-227ENST00000638142 K7ERU9 68 aa15.69■□□□□ 0.1
SYNGAP1-227ENST00000638142 PAX8Q06710 450 aa15.69■□□□□ 0.1
SYNGAP1-227ENST00000638142 PIP4P2Q8N4L2 257 aa15.69■□□□□ 0.1
SYNGAP1-227ENST00000638142 GVINP1Q7Z2Y8 2422 aa15.68■□□□□ 0.1
SYNGAP1-227ENST00000638142 SNAI2O43623 268 aa15.68■□□□□ 0.1
SYNGAP1-227ENST00000638142 RABAC1Q9UI14 185 aa15.68■□□□□ 0.1
SYNGAP1-227ENST00000638142 FAM90A27PA6NNH2 459 aa15.68■□□□□ 0.1
SYNGAP1-227ENST00000638142 IGLC6P0CF74 106 aa15.68■□□□□ 0.1
SYNGAP1-227ENST00000638142 S100A7P31151 101 aa15.68■□□□□ 0.1
SYNGAP1-227ENST00000638142 CKS2P33552 79 aa15.68■□□□□ 0.1
SYNGAP1-227ENST00000638142 SRSF2Q01130 221 aaKnown RBP15.68■□□□□ 0.1
SYNGAP1-227ENST00000638142 BOD1L2Q8IYS8 172 aa15.68■□□□□ 0.1
SYNGAP1-227ENST00000638142 PIEZO2Q9H5I5 2752 aa15.68■□□□□ 0.1
SYNGAP1-227ENST00000638142 NCBP2LA6PVI3 153 aaKnown RBP15.67■□□□□ 0.1
SYNGAP1-227ENST00000638142 H3BRM9 83 aa15.67■□□□□ 0.1
SYNGAP1-227ENST00000638142 LY6HO94772 140 aa15.67■□□□□ 0.1
SYNGAP1-227ENST00000638142 TWIST1Q15672 202 aa15.67■□□□□ 0.1
SYNGAP1-227ENST00000638142 Q8N6K4 173 aa15.67■□□□□ 0.1
SYNGAP1-227ENST00000638142 NPFFR1Q9GZQ6 430 aa15.67■□□□□ 0.1
SYNGAP1-227ENST00000638142 A6NDN8 102 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 GAGE10A6NGK3 116 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 OOSP1A8MZH6 123 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 CTSGP08311 255 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 GRNP28799 593 aaKnown RBP15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 CACNG7P62955 275 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 UFSP1Q6NVU6 142 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 SMAD5-AS1Q9Y6J3 95 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 DCHS1Q96JQ0 3298 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 A0A1W2PRD5 423 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 A0A1W2PRF3 423 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 A0A1W2PRM7 423 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 IGHV3-23P01764 117 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 ZNF80P51504 273 aaPredicted RBP15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 Q8TAT8 98 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 IFI27L1Q96BM0 104 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 VGLL1Q99990 258 aa15.66■□□□□ 0.1
SYNGAP1-227ENST00000638142 C9orf118A6NHY6 69 aa15.65■□□□□ 0.1
SYNGAP1-227ENST00000638142 NPYP01303 97 aa15.65■□□□□ 0.1
SYNGAP1-227ENST00000638142 GTF2H5Q6ZYL4 71 aa15.65■□□□□ 0.1
SYNGAP1-227ENST00000638142 OR9G4Q8NGQ1 327 aa15.65■□□□□ 0.1
SYNGAP1-227ENST00000638142 SIVA1O15304 175 aa15.65■□□□□ 0.1
SYNGAP1-227ENST00000638142 IGHG4P01861 327 aa15.65■□□□□ 0.1
SYNGAP1-227ENST00000638142 EBI3Q14213 229 aa15.65■□□□□ 0.1
SYNGAP1-227ENST00000638142 HSD52Q0P140 79 aa15.64■□□□□ 0.09
SYNGAP1-227ENST00000638142 C1orf122Q6ZSJ8 110 aa15.64■□□□□ 0.09
SYNGAP1-227ENST00000638142 VMO1Q7Z5L0 202 aa15.64■□□□□ 0.09
SYNGAP1-227ENST00000638142 CNFNQ9BYD5 112 aa15.64■□□□□ 0.09
SYNGAP1-227ENST00000638142 SMAD7O15105 426 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms