RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CSAG2Q9Y5P2 127 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 ANKARQ7Z5J8 1434 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 PRXQ9BXM0 1461 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 URB2Q14146 1524 aaKnown RBP2.05□□□□□ -2.08
PSPC1-208ENST00000635562 PIK3C2BO00750 1634 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 SHROOM2Q13796 1616 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 PLXNA3P51805 1871 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 SCN9AQ15858 1988 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 GRIFINA4D1Z8 144 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 EFCAB5A4FU69 1503 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 RBAKDNA6NC62 111 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 FAM24AA6NFZ4 105 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 INS-IGF2F8WCM5 200 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 M0R233 179 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 SSSCA1O60232 199 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 YPEL1O60688 119 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 CFDP00746 253 aaPredicted RBP2.04□□□□□ -2.08
PSPC1-208ENST00000635562 IGHV3-23P01764 117 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 CD3DP04234 171 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 IGKV1-16P04430 117 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 SLC25A4P12235 298 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 CCL4P13236 92 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 TPT1P13693 172 aaKnown RBP2.04□□□□□ -2.08
PSPC1-208ENST00000635562 GOLGA3Q08378 1498 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 DIP2AQ14689 1571 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 HMGN3Q15651 99 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 MPV17L2Q567V2 206 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 FAM104BQ5XKR9 115 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 HEPN1Q6WQI6 88 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 UBR1Q8IWV7 1749 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 POM121L12Q8N7R1 296 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 DAND5Q8N907 189 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 ITLN1Q8WWA0 313 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 C1orf147Q96MC9 270 aaPredicted RBP2.04□□□□□ -2.08
PSPC1-208ENST00000635562 CAMK2N2Q96S95 79 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 RNF17Q9BXT8 1623 aaKnown RBP2.04□□□□□ -2.08
PSPC1-208ENST00000635562 FGF23Q9GZV9 251 aaPredicted RBP2.04□□□□□ -2.08
PSPC1-208ENST00000635562 CDK12Q9NYV4 1490 aaPredicted RBP2.04□□□□□ -2.08
PSPC1-208ENST00000635562 EPDR1Q9UM22 224 aa2.04□□□□□ -2.08
PSPC1-208ENST00000635562 MYO5AQ9Y4I1 1855 aaKnown RBP2.03□□□□□ -2.08
PSPC1-208ENST00000635562 COL18A1P39060 1754 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 DIP2CQ9Y2E4 1556 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 CLASP1Q7Z460 1538 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 ATP10BO94823 1461 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 A0A087WXM4 84 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 IGHV3-43A0A0B4J1X8 118 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 IGHV1OR15-9A0A0B4J2B8 117 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 A0A0J9YXY3 114 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 TRBV7-7A0A0K0K1E9 115 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 ZFP92A6NM28 416 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 LEPROTO15243 131 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 SNCGO76070 127 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 IGLC2P0DOY2 106 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 IGLC3P0DOY3 106 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 POLR2JP52435 117 aaKnown RBP2.03□□□□□ -2.08
PSPC1-208ENST00000635562 LSM3P62310 102 aaKnown RBP2.03□□□□□ -2.08
PSPC1-208ENST00000635562 HIST1H4AP62805 103 aaKnown RBP2.03□□□□□ -2.08
PSPC1-208ENST00000635562 SEC11AP67812 179 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 RPL18Q07020 188 aaKnown RBP2.03□□□□□ -2.08
PSPC1-208ENST00000635562 CDK5R1Q15078 307 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 MIC13Q5XKP0 118 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 PATE2Q6UY27 113 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 DPPA3Q6W0C5 159 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 SPATA12Q7Z6I5 190 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 SBSPONQ8IVN8 264 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.03□□□□□ -2.08
PSPC1-208ENST00000635562 C3orf56Q8N813 242 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 VSTM2AQ8TAG5 236 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 ITLN2Q8WWU7 325 aaPredicted RBP2.03□□□□□ -2.08
PSPC1-208ENST00000635562 DSCR8Q96T75 97 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 NPCDR1Q9BY65 106 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 ST20Q9HBF5 79 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 XAGE1AQ9HD64 81 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 C8orf17Q9NRJ1 99 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 CELA1Q9UNI1 258 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 HHLA3Q9XRX5 114 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 CASP8AP2Q9UKL3 1982 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 LRP4O75096 1905 aa2.03□□□□□ -2.08
PSPC1-208ENST00000635562 ZNF646O15015 1829 aaPredicted RBP2.03□□□□□ -2.09
PSPC1-208ENST00000635562 BRWD3Q6RI45 1802 aa2.03□□□□□ -2.09
PSPC1-208ENST00000635562 LAMB1P07942 1786 aa2.03□□□□□ -2.09
PSPC1-208ENST00000635562 MYO3AQ8NEV4 1616 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 PLXNC1O60486 1568 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 DUOX2Q9NRD8 1548 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 ARID1AO14497 2285 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 PLA2R1Q13018 1463 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 IQSEC2Q5JU85 1478 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 C10orf71Q711Q0 1435 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 ABCA7Q8IZY2 2146 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 PTPRSQ13332 1948 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 IGLV1-50A0A075B6I6 118 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.02□□□□□ -2.09
PSPC1-208ENST00000635562 KLF18A0A0U1RQI7 1052 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 C3orf84H3BNL1 204 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 H3BRM9 83 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 HYPMO75409 117 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 PROSCO94903 275 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 SLC25A14O95258 325 aaPredicted RBP2.02□□□□□ -2.09
PSPC1-208ENST00000635562 TCL1BO95988 128 aa2.02□□□□□ -2.09
PSPC1-208ENST00000635562 HLA-DQA1P01909 254 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms