RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 PRSS47A8MTI9 375 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 D6R8Y8 96 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 KLK10O43240 276 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 PLAUP00749 431 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 CRYGBP07316 175 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 FAM106CPP0CH98 169 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 FCER1GP30273 86 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 CRIP1P50238 77 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 FXYD2P54710 66 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 PDE6HQ13956 83 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 MSMPQ1L6U9 139 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 FAM106AQ4KMX7 169 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 ZNF562Q6V9R5 426 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 GOLT1AQ6ZVE7 132 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 PCP2Q8IVA1 136 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 MRAP2Q96G30 205 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 SPAG8Q99932 426 aaPredicted RBP3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 SRSF8Q9BRL6 282 aaKnown RBP3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 KRTAP9-3Q9BYQ3 159 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 SH3BGRL2Q9UJC5 107 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 HHLA3Q9XRX5 114 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 FREM2Q5SZK8 3169 aa3.29□□□□□ -1.88
PTP4A1-205ENST00000626021 TRBV25-1A0A075B6N4 114 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 A0A1B0GWB2 263 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 H3BRN7 92 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 MRPS12O15235 138 aaKnown RBP3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 IGKCP01834 107 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 TNFRSF1AP19438 455 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 GCSHP23434 173 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 FCGR2BP31994 310 aaPredicted RBP3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 RPL27AP46776 148 aaKnown RBP3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 NMUP48645 174 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 CKS1BP61024 79 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 ODF1Q14990 250 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 PLGLAQ15195 96 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 SPRNQ5BIV9 151 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 CCDC144NLQ6NUI1 221 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 LYZL1Q6UWQ5 148 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 SIGLEC15Q6ZMC9 328 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 SEM1Q6ZVN7 128 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 S100A7AQ86SG5 101 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 NAA38Q9BRA0 125 aaKnown RBP3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 CHAC1Q9BUX1 264 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 GTSF1LQ9H1H1 148 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 VCX2Q9H322 139 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 NGBQ9NPG2 151 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 NXT2Q9NPJ8 142 aaKnown RBP3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 TIMM8BQ9Y5J9 83 aaPredicted RBP3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 F11RQ9Y624 299 aaKnown RBP3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 RIF1Q5UIP0 2472 aaKnown RBP3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 TRAV8-1A0A0A6YYK1 113 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 LOC389332A0A1B0GUA5 103 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 IGLC6P0CF74 106 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 RAB9AP51151 201 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 SMAGPQ0VAQ4 97 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 TWIST1Q15672 202 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 C12orf74Q32Q52 190 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 KLF17Q5JT82 389 aaPredicted RBP3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 PRR31Q5SQ13 230 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 AMN1Q8IY45 258 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 TTC9CQ8N5M4 171 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 ARPC1AQ92747 370 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 ZNF479Q96JC4 524 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 CCL13Q99616 98 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 SHANK2-AS3Q9BTD1 123 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 CNFNQ9BYD5 112 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 MAP1LC3AQ9H492 121 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 DKK2Q9UBU2 259 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 PRO0461Q9UI25 63 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 PROCRQ9UNN8 238 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 FAM215AQ9Y5M1 114 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 PTPRQQ9UMZ3 2332 aa3.28□□□□□ -1.88
PTP4A1-205ENST00000626021 URB1O60287 2271 aaKnown RBP3.28□□□□□ -1.89
PTP4A1-205ENST00000626021 ARFGEF3Q5TH69 2177 aa3.28□□□□□ -1.89
PTP4A1-205ENST00000626021 ACACAQ13085 2346 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 CADP27708 2225 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 FRYQ5TBA9 3013 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 NPIPB5A8MRT5 1133 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 I3L2K1 104 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 SPRY3O43610 288 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 DPM2O94777 84 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 NPYP01303 97 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 CKS2P33552 79 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 TNFAIP6P98066 277 aaPredicted RBP3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 WFDC2Q14508 124 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 GAGE13Q4V321 117 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 C10orf55Q5SWW7 151 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 FAM201AQ5SY85 155 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 RUSC1-AS1Q66K80 236 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 DUX4L9Q6RFH8 374 aaPredicted RBP3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 EXOC3-AS1Q8N2X6 119 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 CNEP1R1Q8N9A8 125 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 FAM57AQ8TBR7 257 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 ZNF48Q96MX3 618 aaPredicted RBP3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 C18orf15Q96N68 181 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 RNF5Q99942 180 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 CYSLTR1Q9Y271 337 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 APC2O95996 2303 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 AGRNO00468 2067 aa3.27□□□□□ -1.89
PTP4A1-205ENST00000626021 TRBV7-3A0A075B6L6 115 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms