RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ZNF680Q8NEM1 530 aa9.97□□□□□ -0.81
PNKP-218ENST00000625299 ZNF431Q8TF32 576 aaPredicted RBP9.97□□□□□ -0.81
PNKP-218ENST00000625299 PSENENQ9NZ42 101 aa9.97□□□□□ -0.81
PNKP-218ENST00000625299 RNF24Q9Y225 148 aa9.97□□□□□ -0.81
PNKP-218ENST00000625299 LY96Q9Y6Y9 160 aa9.97□□□□□ -0.81
PNKP-218ENST00000625299 IGLV5-52A0A0A0MRZ9 124 aa9.96□□□□□ -0.82
PNKP-218ENST00000625299 ZNF324O75467 553 aaPredicted RBP9.96□□□□□ -0.82
PNKP-218ENST00000625299 CCNKO75909 580 aa9.96□□□□□ -0.82
PNKP-218ENST00000625299 POLR2GP62487 172 aaKnown RBP eCLIP9.96□□□□□ -0.82
PNKP-218ENST00000625299 BPIFA4PQ86YQ2 179 aa9.96□□□□□ -0.82
PNKP-218ENST00000625299 LRTM2Q8N967 370 aa9.96□□□□□ -0.82
PNKP-218ENST00000625299 LINC00467Q9BRT7 94 aa9.96□□□□□ -0.82
PNKP-218ENST00000625299 MSRB1Q9NZV6 116 aa9.96□□□□□ -0.82
PNKP-218ENST00000625299 NPIPB6E9PJ23 425 aa9.95□□□□□ -0.82
PNKP-218ENST00000625299 SSSCA1O60232 199 aa9.95□□□□□ -0.82
PNKP-218ENST00000625299 TEPPQ6URK8 271 aa9.95□□□□□ -0.82
PNKP-218ENST00000625299 LYPD5Q6UWN5 251 aa9.95□□□□□ -0.82
PNKP-218ENST00000625299 ZBTB8BQ8NAP8 495 aaPredicted RBP9.95□□□□□ -0.82
PNKP-218ENST00000625299 C11orf72Q8NBR9 251 aa9.95□□□□□ -0.82
PNKP-218ENST00000625299 CCDC59Q9P031 241 aaKnown RBP9.95□□□□□ -0.82
PNKP-218ENST00000625299 RABL2AQ9UBK7 228 aaPredicted RBP9.95□□□□□ -0.82
PNKP-218ENST00000625299 KLF12Q9Y4X4 402 aa9.95□□□□□ -0.82
PNKP-218ENST00000625299 GOSR2O14653 212 aa9.94□□□□□ -0.82
PNKP-218ENST00000625299 COX7A2P2O60397 106 aa9.94□□□□□ -0.82
PNKP-218ENST00000625299 FAUP35544 74 aaKnown RBP9.94□□□□□ -0.82
PNKP-218ENST00000625299 PPP1R1AQ13522 171 aa9.94□□□□□ -0.82
PNKP-218ENST00000625299 SPCS2Q15005 226 aa9.94□□□□□ -0.82
PNKP-218ENST00000625299 WFDC10BQ8IUB3 73 aa9.94□□□□□ -0.82
PNKP-218ENST00000625299 C8orf49Q96NF6 230 aa9.94□□□□□ -0.82
PNKP-218ENST00000625299 ODF3Q96PU9 254 aa9.94□□□□□ -0.82
PNKP-218ENST00000625299 NPVFQ9HCQ7 196 aa9.94□□□□□ -0.82
PNKP-218ENST00000625299 MRPL16Q9NX20 251 aaKnown RBP9.94□□□□□ -0.82
PNKP-218ENST00000625299 MGAT4CQ9UBM8 478 aa9.94□□□□□ -0.82
PNKP-218ENST00000625299 RSL24D1Q9UHA3 163 aaKnown RBP9.94□□□□□ -0.82
PNKP-218ENST00000625299 PXMP4Q9Y6I8 212 aa9.94□□□□□ -0.82
PNKP-218ENST00000625299 C7orf71A4D174 169 aa9.93□□□□□ -0.82
PNKP-218ENST00000625299 PRAF2O60831 178 aa9.93□□□□□ -0.82
PNKP-218ENST00000625299 SFT2D2O95562 160 aa9.93□□□□□ -0.82
PNKP-218ENST00000625299 SLC25A5P05141 298 aaKnown RBP9.93□□□□□ -0.82
PNKP-218ENST00000625299 METTL15P1P0C7V9 234 aa9.93□□□□□ -0.82
PNKP-218ENST00000625299 BTN1A1Q13410 526 aa9.93□□□□□ -0.82
PNKP-218ENST00000625299 MORN5Q5VZ52 161 aa9.93□□□□□ -0.82
PNKP-218ENST00000625299 ZNF546Q86UE3 836 aa9.93□□□□□ -0.82
PNKP-218ENST00000625299 ST6GAL2Q96JF0 529 aa9.93□□□□□ -0.82
PNKP-218ENST00000625299 PRO0255Q9UI72 69 aa9.93□□□□□ -0.82
PNKP-218ENST00000625299 H3BQ15 152 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 PSCAO43653 123 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 SPINK4O60575 86 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 IGLC2P0DOY2 106 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 EVI2AP22794 236 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 CRYBA4P53673 196 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 ERCC8Q13216 396 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 OPCMLQ14982 345 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 MRPL23Q16540 153 aaKnown RBP9.92□□□□□ -0.82
PNKP-218ENST00000625299 PXDC1Q5TGL8 231 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 NEGR1Q7Z3B1 354 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 EIF4E3Q8N5X7 224 aaKnown RBP9.92□□□□□ -0.82
PNKP-218ENST00000625299 MCFD2Q8NI22 146 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 TMEM70Q9BUB7 260 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 HHLA3Q9XRX5 114 aa9.92□□□□□ -0.82
PNKP-218ENST00000625299 E5RGE8 158 aa9.91□□□□□ -0.82
PNKP-218ENST00000625299 K7EPK0 472 aa9.91□□□□□ -0.82
PNKP-218ENST00000625299 AGPAT2O15120 278 aa9.91□□□□□ -0.82
PNKP-218ENST00000625299 SRIP30626 198 aa9.91□□□□□ -0.82
PNKP-218ENST00000625299 RNASE4P34096 147 aaKnown RBP9.91□□□□□ -0.82
PNKP-218ENST00000625299 TCL1AP56279 114 aa9.91□□□□□ -0.82
PNKP-218ENST00000625299 ID3Q02535 119 aa9.91□□□□□ -0.82
PNKP-218ENST00000625299 CD300CQ08708 224 aa9.91□□□□□ -0.82
PNKP-218ENST00000625299 C10orf113Q5VZT2 155 aa9.91□□□□□ -0.82
PNKP-218ENST00000625299 OR10P1Q8NGE3 313 aa9.91□□□□□ -0.82
PNKP-218ENST00000625299 UBR4Q5T4S7 5183 aa9.91□□□□□ -0.82
PNKP-218ENST00000625299 SCGB1D2O95969 90 aa9.9□□□□□ -0.82
PNKP-218ENST00000625299 CRYGDP07320 174 aa9.9□□□□□ -0.82
PNKP-218ENST00000625299 SLAQ13239 276 aa9.9□□□□□ -0.82
PNKP-218ENST00000625299 ANXA2RQ3ZCQ2 193 aa9.9□□□□□ -0.82
PNKP-218ENST00000625299 TMEM37Q8WXS4 190 aa9.9□□□□□ -0.82
PNKP-218ENST00000625299 SAT2Q96F10 170 aaPredicted RBP9.9□□□□□ -0.82
PNKP-218ENST00000625299 TP53TG3Q9ULZ0 132 aa9.9□□□□□ -0.82
PNKP-218ENST00000625299 DNAH8Q96JB1 4490 aa9.9□□□□□ -0.83
PNKP-218ENST00000625299 TRAV5A0A0B4J249 113 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 TRGV4A0A0C4DH28 118 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 FABP12A6NFH5 140 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 M0R3E3 92 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 RGS13O14921 159 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 OR4E1P0C645 316 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 SMIM18P0DKX4 95 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 ZNF415Q09FC8 603 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 FHL2Q14192 279 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 TMEM14EPQ6UXP3 125 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 TOMM5Q8N4H5 51 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 PCNPQ8WW12 178 aaKnown RBP9.89□□□□□ -0.83
PNKP-218ENST00000625299 SMIM8Q96KF7 97 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 VGLL1Q99990 258 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 ARPC5LQ9BPX5 153 aa9.89□□□□□ -0.83
PNKP-218ENST00000625299 HMCN2Q8NDA2 5059 aa9.88□□□□□ -0.83
PNKP-218ENST00000625299 KLLNB2CW77 178 aa9.88□□□□□ -0.83
PNKP-218ENST00000625299 FNDC10F2Z333 226 aa9.88□□□□□ -0.83
PNKP-218ENST00000625299 K7EQD1 137 aa9.88□□□□□ -0.83
PNKP-218ENST00000625299 MPDU1O75352 247 aa9.88□□□□□ -0.83
PNKP-218ENST00000625299 PLA2G1BP04054 148 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms