RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 CTSGP08311 255 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 HIST1H1EP10412 219 aaKnown RBP7.75□□□□□ -1.17
VTA1-205ENST00000620996 PF4V1P10720 104 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 GATA3P23771 443 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 YPEL3P61236 119 aaPredicted RBP7.75□□□□□ -1.17
VTA1-205ENST00000620996 SLC35B1P78383 322 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 AMMECR1LQ6DCA0 310 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 ASCL2Q99929 193 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 SRP14P37108 136 aaKnown RBP7.74□□□□□ -1.17
VTA1-205ENST00000620996 TMEM95Q3KNT9 176 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 GOLT1AQ6ZVE7 132 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 C20orf144Q9BQM9 153 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 GTSF1LQ9H1H1 148 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 CCDC168Q8NDH2 2452 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 TENM4Q6N022 2769 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 TRAV8-1A0A0A6YYK1 113 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 A6NJY4 79 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 CA1P00915 261 aaPredicted RBP7.74□□□□□ -1.17
VTA1-205ENST00000620996 ADMP35318 185 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 IBA57Q5T440 356 aaKnown RBP7.74□□□□□ -1.17
VTA1-205ENST00000620996 Q6ZS46 218 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 BEX4Q9NWD9 120 aaPredicted RBP7.74□□□□□ -1.17
VTA1-205ENST00000620996 CREBBPQ92793 2442 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 BMPR1BO00238 502 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 C5orf17Q8NAS9 161 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 ZNF502Q8TBZ5 544 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 DUX5Q96PT3 197 aa7.74□□□□□ -1.17
VTA1-205ENST00000620996 TRBV24-1A0A075B6N3 115 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 TRAV26-1A0A087WT03 109 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 WI2-2373I1.2A0A1W2PRP0 233 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 A6NDX4 124 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 PLA2G2AP14555 144 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 RPEL1Q2QD12 228 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 PRNTQ86SH4 94 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 CDC42EP3Q9UKI2 254 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 IGHV4-31P0DP07 118 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 CD99P14209 185 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 SLAQ13239 276 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 KIAA1644Q3SXP7 199 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 IGFL4Q6B9Z1 124 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 IL17RELQ6ZVW7 336 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 NIT1Q86X76 327 aa7.73□□□□□ -1.17
VTA1-205ENST00000620996 GAGE12BA1L429 117 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 IGF2BP2-AS1Q96M15 143 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 CCDC140Q96MF4 163 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 TRAPPC1Q9Y5R8 145 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 ZNF785A8K8V0 405 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 M0R3E3 92 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 TCRAP04437 139 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 LOXL1Q08397 574 aaPredicted RBP7.72□□□□□ -1.17
VTA1-205ENST00000620996 IMMP2LQ96T52 175 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 AAMDCQ9H7C9 122 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 OTORQ9NRC9 128 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 TMEM14CQ9P0S9 112 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 TRBV19A0A075B6N1 114 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 DIRC3C9JPN6 131 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 IL36BQ9NZH7 164 aa7.72□□□□□ -1.17
VTA1-205ENST00000620996 A0A096LNT2 108 aa7.71□□□□□ -1.17
VTA1-205ENST00000620996 CRYBA4P53673 196 aa7.71□□□□□ -1.17
VTA1-205ENST00000620996 SHISA2Q6UWI4 295 aa7.71□□□□□ -1.17
VTA1-205ENST00000620996 ZNF48Q96MX3 618 aaPredicted RBP7.71□□□□□ -1.17
VTA1-205ENST00000620996 RNF114Q9Y508 228 aa7.71□□□□□ -1.17
VTA1-205ENST00000620996 LY96Q9Y6Y9 160 aa7.71□□□□□ -1.17
VTA1-205ENST00000620996 PRRC2AP48634 2157 aaKnown RBP7.71□□□□□ -1.17
VTA1-205ENST00000620996 TLN2Q9Y4G6 2542 aa7.71□□□□□ -1.18
VTA1-205ENST00000620996 J3QLI3 93 aa7.71□□□□□ -1.18
VTA1-205ENST00000620996 RPL7P18124 248 aaKnown RBP7.71□□□□□ -1.18
VTA1-205ENST00000620996 ARL3P36405 182 aa7.71□□□□□ -1.18
VTA1-205ENST00000620996 BAGE3Q86Y29 109 aa7.71□□□□□ -1.18
VTA1-205ENST00000620996 DAZAP1Q96EP5 407 aaKnown RBP7.71□□□□□ -1.18
VTA1-205ENST00000620996 UQCR10Q9UDW1 63 aa7.71□□□□□ -1.18
VTA1-205ENST00000620996 APCP25054 2843 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 TRBV7-1A0A0A6YYK4 115 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 TRBV9A0A0B4J1U6 114 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 F2Z2F3 143 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 IGLV2-8P01709 118 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 MRPL54Q6P161 138 aaKnown RBP7.7□□□□□ -1.18
VTA1-205ENST00000620996 TEX43Q6ZNM6 134 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 WFDC11Q8NEX6 87 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 NAA38Q9BRA0 125 aaKnown RBP7.7□□□□□ -1.18
VTA1-205ENST00000620996 KLK15Q9H2R5 256 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 V9GYV3 84 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 K7EQM0 130 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 IGLC2P0DOY2 106 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 PMCHP20382 165 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 CBLN1P23435 193 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 MYCNOSP40205 109 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 IER3P46695 156 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 CSN1S1P47710 185 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 ZNF414Q96IQ9 312 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 TRBV12-3P01733 135 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 RAB9AP51151 201 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 CIARTQ8N365 385 aaPredicted RBP7.7□□□□□ -1.18
VTA1-205ENST00000620996 FMC1Q96HJ9 113 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 GPR82Q96P67 336 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 METTL26Q96S19 204 aa7.7□□□□□ -1.18
VTA1-205ENST00000620996 SERF1AO75920 110 aa7.69□□□□□ -1.18
VTA1-205ENST00000620996 IGHG2P01859 326 aa7.69□□□□□ -1.18
VTA1-205ENST00000620996 COA6Q5JTJ3 125 aaKnown RBP7.69□□□□□ -1.18
VTA1-205ENST00000620996 IGKV3-7A0A075B6H7 116 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms