RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RPS20P60866 119 aaKnown RBP4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 TWIST1Q15672 202 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 LY6EQ16553 131 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 NIT1Q86X76 327 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 ZNF491Q8N8L2 437 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 FAM231BA6NCW3 169 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 NPFFO15130 113 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 TRGV3P03979 118 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 ARMS2P0C7Q2 107 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 BTF3P20290 206 aaKnown RBP4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 PPIFP30405 207 aaKnown RBP4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 ZNF503Q96F45 646 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 C16orf92Q96LL3 132 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 POLR3KQ9Y2Y1 108 aaPredicted RBP4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 TRBV19A0A075B6N1 114 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 IGHV3-66A0A0C4DH42 116 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 SNAI2O43623 268 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 OR10J3Q5JRS4 329 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 CLEC19AQ6UXS0 136 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 C8orf31Q8N9H6 132 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 C18orf15Q96N68 181 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 ALKBH7Q9BT30 221 aaPredicted RBP4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 BPESC1Q9GZL8 116 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 C7orf69Q9H7B7 122 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 AGRNO00468 2067 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 F2Z2F3 143 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 INS-IGF2F8WCM5 200 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 NDUFB8O95169 186 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 PSG9Q00887 426 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 RASL11AQ6T310 242 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 FER1L6-AS1Q8NA97 138 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 CT83Q5H943 113 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 Q86TA4 180 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 ZNF329Q86UD4 541 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 TANC2Q9HCD6 1990 aa4.49□□□□□ -1.69
SYNCRIP-204ENST00000616122 TRAV8-6A0A0B4J262 113 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 A0A1B0GW15 77 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 A0A1W2PS18 150 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 K7ERU9 68 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 TDRG1Q3Y452 100 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 LYPD1Q8N2G4 141 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 BAHCC1Q9P281 2608 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 FBLL1A6NHQ2 334 aaKnown RBP4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 IGLC2P0DOY2 106 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 IGLC3P0DOY3 106 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 MINOS1Q5TGZ0 78 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 IGFL4Q6B9Z1 124 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 VPS25Q9BRG1 176 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 MINOS1-NBL1R4GNA1 71 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 NMUP48645 174 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 NUTF2P61970 127 aaKnown RBP4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 THAP8Q8NA92 274 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 ZNRF2Q8NHG8 242 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 RCHY1Q96PM5 261 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 TMEM208Q9BTX3 173 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 M0R1W7 72 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 SMIM17P0DL12 118 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 TDGF1P3P51864 188 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 PDE6HQ13956 83 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 ZNF414Q96IQ9 312 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 MUC4Q99102 2169 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 KIAA1549Q9HCM3 1950 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 K7EIM0 57 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 M0R381 172 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 CIDEAO60543 219 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 SAA4P35542 130 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 PDLIM4P50479 330 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 WFDC3Q8IUB2 231 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 ASCL2Q99929 193 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 G3V318 75 aa4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 SSBP2P81877 361 aaPredicted RBP4.48□□□□□ -1.69
SYNCRIP-204ENST00000616122 LRP4O75096 1905 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 TNRC6AQ8NDV7 1962 aaKnown RBP4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 PPBPP02775 128 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 RNASE1P07998 156 aaKnown RBP4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 IFITM1P13164 125 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 UQCRFS1P47985 274 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 HIST1H1AQ02539 215 aaPredicted RBP4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 CYB5R2Q6BCY4 276 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 UNQ6494/PRO21346Q6UXR6 183 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 BRD3OSQ6XYD6 125 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 TMEM219Q86XT9 240 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 SRSF8Q9BRL6 282 aaKnown RBP4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 SLC50A1Q9BRV3 221 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 MCRIP2Q9BUT9 160 aaKnown RBP4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 PLP1P60201 277 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 S100A7L2Q5SY68 101 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 PET117Q6UWS5 81 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 EEF1AKMT3Q96AZ1 226 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 KLK15Q9H2R5 256 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 MAP1LC3AQ9H492 121 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 LYZL1Q6UWQ5 148 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 AMN1Q8IY45 258 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 IGFBPL1Q8WX77 278 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 IGKV1D-37A0A075B6S9 117 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 IGKV2-40A0A087WW87 121 aaPredicted RBP4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 TRAV40A0A0B4J280 105 aa4.47□□□□□ -1.69
SYNCRIP-204ENST00000616122 IGKV2D-40P01614 121 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms