RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 CDX1P47902 265 aaPredicted RBP6.81□□□□□ -1.32
CCDC47-207ENST00000612558 BAGE2Q86Y30 109 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 ARL6IP6Q8N6S5 226 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 SMIM12Q96EX1 92 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 SFRP2Q96HF1 295 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 DAZ1Q9NQZ3 744 aaKnown RBP6.81□□□□□ -1.32
CCDC47-207ENST00000612558 IGHV7-4-1A0A0J9YVY3 117 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 TRBV6-1A0A0K0K1D8 114 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 SERTM2A0A1B0GWG4 89 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 DIRC3C9JPN6 131 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 GCGP01275 180 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 ELOBQ15370 118 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 GOLT1AQ6ZVE7 132 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 FAM24BQ8N5W8 94 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 OR10G8Q8NGN5 311 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 GLMPQ8WWB7 406 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 YPEL4Q96NS1 127 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 SLC50A1Q9BRV3 221 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 C16orf95Q9H693 158 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 ZNF331Q9NQX6 463 aaPredicted RBP6.8□□□□□ -1.32
CCDC47-207ENST00000612558 TMA7Q9Y2S6 64 aaKnown RBP6.8□□□□□ -1.32
CCDC47-207ENST00000612558 UFC1Q9Y3C8 167 aa6.8□□□□□ -1.32
CCDC47-207ENST00000612558 MGST1P10620 155 aaKnown RBP6.79□□□□□ -1.32
CCDC47-207ENST00000612558 TM4SF20Q53R12 229 aa6.79□□□□□ -1.32
CCDC47-207ENST00000612558 TMEM75Q8N9X5 138 aa6.79□□□□□ -1.32
CCDC47-207ENST00000612558 WIPF2Q8TF74 440 aaPredicted RBP6.79□□□□□ -1.32
CCDC47-207ENST00000612558 URGCP-MRPS24S4R325 110 aa6.79□□□□□ -1.32
CCDC47-207ENST00000612558 NF1P21359 2839 aa6.79□□□□□ -1.32
CCDC47-207ENST00000612558 IGHV4OR15-8A0A075B7B6 117 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 A0A087WW49 117 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 M0R3E3 92 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 LGALS9O00182 355 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 CHEK1O14757 476 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 LTAP01374 205 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 IGLV2-11P01706 119 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 PFN1P07737 140 aaKnown RBP6.78□□□□□ -1.32
CCDC47-207ENST00000612558 S100PP25815 95 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 BMI1P35226 326 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 ERVFC1-1P60608 527 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 OR5I1Q13606 314 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 PSG3Q16557 428 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 TCTEX1D4Q5JR98 221 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 REC114Q7Z4M0 266 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 C4orf3Q8WVX3 66 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 SGK494Q96LW2 274 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 IMMP2LQ96T52 175 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 MLST8Q9BVC4 326 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 RHPN1-AS1Q9BWJ2 59 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 OSTCQ9NRP0 149 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 CLEC5AQ9NY25 188 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 SMPXQ9UHP9 88 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 FBLL1A6NHQ2 334 aaKnown RBP6.78□□□□□ -1.32
CCDC47-207ENST00000612558 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 A8MWP6 167 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 INAFM1C9JVW0 142 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 NDUFA7O95182 113 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 RAB5AP20339 215 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 HOXD3P31249 432 aaPredicted RBP6.78□□□□□ -1.32
CCDC47-207ENST00000612558 FLI1Q01543 452 aaPredicted RBP6.78□□□□□ -1.32
CCDC47-207ENST00000612558 LCN12Q6JVE5 192 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 KCNIP4Q6PIL6 250 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 Q71RC1 249 aaPredicted RBP6.78□□□□□ -1.32
CCDC47-207ENST00000612558 Q86TA4 180 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 C1QL4Q86Z23 238 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 TMEM183AQ8IXX5 376 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 NHLRC2Q8NBF2 726 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 LINC01006Q8NI28 216 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 MRPL53Q96EL3 112 aaKnown RBP6.78□□□□□ -1.32
CCDC47-207ENST00000612558 BIN3Q9NQY0 253 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 ZFP30Q9Y2G7 519 aa6.78□□□□□ -1.32
CCDC47-207ENST00000612558 TRBV24-1A0A075B6N3 115 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 TRAV8-1A0A0A6YYK1 113 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 LINC01619G3V211 115 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 FOLR2P14207 255 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 SYNJ2BPP57105 145 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 FOXL1Q12952 345 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 KLF5Q13887 457 aaPredicted RBP6.77□□□□□ -1.33
CCDC47-207ENST00000612558 KHDC1LQ5JSQ8 128 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 IBA57Q5T440 356 aaKnown RBP6.77□□□□□ -1.33
CCDC47-207ENST00000612558 IGFL4Q6B9Z1 124 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 FAM231DQ6ZW35 169 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 PRNTQ86SH4 94 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 C16orf92Q96LL3 132 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 RNASE7Q9H1E1 156 aaKnown RBP6.77□□□□□ -1.33
CCDC47-207ENST00000612558 PSG8Q9UQ74 426 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 V9GYV3 84 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 CUBNO60494 3623 aa6.77□□□□□ -1.33
CCDC47-207ENST00000612558 SETD2Q9BYW2 2564 aaPredicted RBP6.76□□□□□ -1.33
CCDC47-207ENST00000612558 NSD1Q96L73 2696 aaPredicted RBP6.76□□□□□ -1.33
CCDC47-207ENST00000612558 TGIF2-C20orf24A0A0A6YYL0 155 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 TRAV8-2A0A0B4J237 113 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 TMEM213A2RRL7 107 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 RBAKDNA6NC62 111 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 ZNF705FA8MVS1 300 aaPredicted RBP6.76□□□□□ -1.33
CCDC47-207ENST00000612558 TCF21O43680 179 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 CXCL1P09341 107 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 HLA-DMBP28068 263 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms