RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 TMEM219Q86XT9 240 aa9.25□□□□□ -0.93
SRRT-213ENST00000611405 KIR2DL5AQ8N109 375 aa9.25□□□□□ -0.93
SRRT-213ENST00000611405 TRAV41A0A0B4J266 112 aa9.24□□□□□ -0.93
SRRT-213ENST00000611405 TRAV40A0A0B4J280 105 aa9.24□□□□□ -0.93
SRRT-213ENST00000611405 KRTDAPP60985 99 aa9.24□□□□□ -0.93
SRRT-213ENST00000611405 C19orf54Q5BKX5 351 aa9.24□□□□□ -0.93
SRRT-213ENST00000611405 IGHV3-35A0A0C4DH35 117 aa9.24□□□□□ -0.93
SRRT-213ENST00000611405 A0A1B0GUT8 65 aa9.24□□□□□ -0.93
SRRT-213ENST00000611405 BUB3O43684 328 aa9.24□□□□□ -0.93
SRRT-213ENST00000611405 BRD3OSQ6XYD6 125 aa9.24□□□□□ -0.93
SRRT-213ENST00000611405 NIT1Q86X76 327 aa9.24□□□□□ -0.93
SRRT-213ENST00000611405 C8orf49Q96NF6 230 aa9.24□□□□□ -0.93
SRRT-213ENST00000611405 ASCL2Q99929 193 aa9.24□□□□□ -0.93
SRRT-213ENST00000611405 IGHV4-30-2A0A087WSY4 118 aa9.23□□□□□ -0.93
SRRT-213ENST00000611405 FAM223BA6NKX1 122 aa9.23□□□□□ -0.93
SRRT-213ENST00000611405 HSBP1O75506 76 aa9.23□□□□□ -0.93
SRRT-213ENST00000611405 FAM223AQ8IWN6 122 aa9.23□□□□□ -0.93
SRRT-213ENST00000611405 GATD1Q8NB37 220 aa9.23□□□□□ -0.93
SRRT-213ENST00000611405 NDFIP1Q9BT67 221 aa9.23□□□□□ -0.93
SRRT-213ENST00000611405 IGKV2-40A0A087WW87 121 aaPredicted RBP9.23□□□□□ -0.93
SRRT-213ENST00000611405 IGKV2D-40P01614 121 aaPredicted RBP9.23□□□□□ -0.93
SRRT-213ENST00000611405 BMI1P35226 326 aa9.23□□□□□ -0.93
SRRT-213ENST00000611405 BORCS7Q96B45 105 aa9.23□□□□□ -0.93
SRRT-213ENST00000611405 RNF114Q9Y508 228 aa9.23□□□□□ -0.93
SRRT-213ENST00000611405 IGHV3OR16-8A0A075B7F1 116 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 LOC102724200A0A096LPH7 203 aaPredicted RBP9.22□□□□□ -0.93
SRRT-213ENST00000611405 CLPSL1A2RUU4 121 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 HSBP1L1C9JCN9 74 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 NTF3P20783 257 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 PRR25Q96S07 402 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 SVEP1Q4LDE5 3571 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 AKAP6Q13023 2319 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.22□□□□□ -0.93
SRRT-213ENST00000611405 SH2D1AO60880 128 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 IGHG4P01861 327 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 MSMBP08118 114 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 IGHV4-38-2P0DP08 117 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 PRB4P10163 310 aaPredicted RBP9.22□□□□□ -0.93
SRRT-213ENST00000611405 DSCR9P59020 149 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 LCN12Q6JVE5 192 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 RNASEKQ6P5S7 137 aaKnown RBP9.22□□□□□ -0.93
SRRT-213ENST00000611405 Q8N976 141 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 METTL26Q96S19 204 aa9.22□□□□□ -0.93
SRRT-213ENST00000611405 TMEM189A5PLL7 270 aa9.21□□□□□ -0.93
SRRT-213ENST00000611405 C20orf144Q9BQM9 153 aa9.21□□□□□ -0.93
SRRT-213ENST00000611405 SLC50A1Q9BRV3 221 aa9.21□□□□□ -0.93
SRRT-213ENST00000611405 VAMP8Q9BV40 100 aa9.21□□□□□ -0.93
SRRT-213ENST00000611405 ARMS2P0C7Q2 107 aa9.21□□□□□ -0.93
SRRT-213ENST00000611405 CHCHD1Q96BP2 118 aaKnown RBP9.21□□□□□ -0.93
SRRT-213ENST00000611405 CSMD1Q96PZ7 3565 aa9.21□□□□□ -0.94
SRRT-213ENST00000611405 M0R2Z0 102 aa9.21□□□□□ -0.94
SRRT-213ENST00000611405 IGF1P05019 195 aa9.21□□□□□ -0.94
SRRT-213ENST00000611405 C3orf79P0CE67 100 aa9.21□□□□□ -0.94
SRRT-213ENST00000611405 RPS20P60866 119 aaKnown RBP9.21□□□□□ -0.94
SRRT-213ENST00000611405 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.21□□□□□ -0.94
SRRT-213ENST00000611405 A6NDX4 124 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 BRI3O95415 125 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 RNF224P0DH78 156 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 HLA-DMBP28068 263 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 LBHQ53QV2 105 aaPredicted RBP9.2□□□□□ -0.94
SRRT-213ENST00000611405 DMRTA1Q5VZB9 504 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 IGFL4Q6B9Z1 124 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 VGLL1Q99990 258 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 U3KQE9 123 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 RBAKDNA6NC62 111 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 M0QZK8 103 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 TRGV3P03979 118 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 CYB5R2Q6BCY4 276 aa9.2□□□□□ -0.94
SRRT-213ENST00000611405 B4DSR2 109 aa9.19□□□□□ -0.94
SRRT-213ENST00000611405 H3BUA1 57 aa9.19□□□□□ -0.94
SRRT-213ENST00000611405 RAB4AP20338 218 aa9.19□□□□□ -0.94
SRRT-213ENST00000611405 SRSF2Q01130 221 aaKnown RBP9.19□□□□□ -0.94
SRRT-213ENST00000611405 TDRG1Q3Y452 100 aa9.19□□□□□ -0.94
SRRT-213ENST00000611405 PRR31Q5SQ13 230 aa9.19□□□□□ -0.94
SRRT-213ENST00000611405 URB1-AS1Q96HZ7 61 aa9.19□□□□□ -0.94
SRRT-213ENST00000611405 ABCA2Q9BZC7 2435 aa9.19□□□□□ -0.94
SRRT-213ENST00000611405 FAM181BA6NEQ2 426 aa9.19□□□□□ -0.94
SRRT-213ENST00000611405 IGHG2P01859 326 aa9.19□□□□□ -0.94
SRRT-213ENST00000611405 MRPL53Q96EL3 112 aaKnown RBP9.19□□□□□ -0.94
SRRT-213ENST00000611405 H3BUX3 64 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 GATA3P23771 443 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 LY6EQ16553 131 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 Q8TAT8 98 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 TPPP3Q9BW30 176 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 LINC00527Q9UJ94 153 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 PAM16Q9Y3D7 125 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 IGHV3-66A0A0C4DH42 116 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 ZNF493Q6ZR52 646 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 LYZL1Q6UWQ5 148 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 USMG5Q96IX5 58 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 MIEN1Q9BRT3 115 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 HIF1ANQ9NWT6 349 aa9.18□□□□□ -0.94
SRRT-213ENST00000611405 CFAP46Q8IYW2 2715 aa9.17□□□□□ -0.94
SRRT-213ENST00000611405 DOPEY1Q5JWR5 2465 aa9.17□□□□□ -0.94
SRRT-213ENST00000611405 TMSB15BA0A087X1C1 80 aa9.17□□□□□ -0.94
SRRT-213ENST00000611405 LINC00614P0C842 121 aa9.17□□□□□ -0.94
SRRT-213ENST00000611405 SLC25A16P16260 332 aa9.17□□□□□ -0.94
SRRT-213ENST00000611405 ARL3P36405 182 aa9.17□□□□□ -0.94
SRRT-213ENST00000611405 C2orf88Q9BSF0 95 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms