RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 C1QBP02746 253 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 CXCL1P09341 107 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 RAB5CP51148 216 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 ARPP19P56211 112 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 ERVS71-1P61550 626 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 MIR22HGQ0VDD5 57 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 GLYATL3Q5SZD4 288 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 MALSU1Q96EH3 234 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 TEX37Q96LM6 180 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 SIGMAR1Q99720 223 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 HSPG2P98160 4391 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 AHCTF1Q8WYP5 2266 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 TENM4Q6N022 2769 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 ADGBQ8N7X0 1667 aa-0.43□□□□□ -2.48
HDDC2-207ENST00000608532 DSTQ03001 7570 aaKnown RBP-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 MYCBP2O75592 4640 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 CD109Q6YHK3 1445 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 TANC2Q9HCD6 1990 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 LOC107984156A0A0G2JMH3 177 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 A0A0J9YY99 117 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 DUXBA0A1W2PPF3 345 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 A6NN06 94 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 NIPSNAP2O75323 286 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 IDO1P14902 403 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 GOLT1AQ6ZVE7 132 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 ARL17AQ8IVW1 177 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 LINC00269Q8N2A0 174 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 C10orf111Q8N326 155 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 LRRC18Q8N456 261 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 OR4K15Q8NH41 348 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 PLEKHB2Q96CS7 222 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 TAF9BQ9HBM6 251 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 NCAPD3P42695 1498 aa-0.44□□□□□ -2.48
HDDC2-207ENST00000608532 NBDYA0A0U1RRE5 68 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 A0A1W2PRS3 328 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 SULT1C4O75897 302 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 RPP14O95059 124 aaKnown RBP-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 MYL6P60660 151 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 IFT20Q8IY31 132 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 C5orf17Q8NAS9 161 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 GNPDA2Q8TDQ7 276 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 ZHX1-C8orf76Q96EF9 292 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 LINC00208Q96KT6 92 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 IMUPQ9GZP8 106 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 NCOR1O75376 2440 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 MUC2Q02817 5179 aa-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.45□□□□□ -2.48
HDDC2-207ENST00000608532 RREB1Q92766 1687 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 SMIM23A6NLE4 172 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 C10orf142B7Z368 130 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 HMGB3O15347 200 aaKnown RBP-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 CST2P09228 141 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 NFYBP25208 207 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 CCL7P80098 99 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 KLRD1Q13241 179 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 ITGB3BPQ13352 177 aaPredicted RBP-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 TAF1AQ15573 450 aaPredicted RBP-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 MSMO1Q15800 293 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 PTRHD1Q6GMV3 140 aaKnown RBP-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 OR10X1Q8NGY0 326 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 ZNF714Q96N38 554 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 POPDC3Q9HBV1 291 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 NINQ8N4C6 2090 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 MED13LQ71F56 2210 aa-0.46□□□□□ -2.48
HDDC2-207ENST00000608532 TNS1Q9HBL0 1735 aaKnown RBP-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 LPAP08519 4548 aa-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 CADP27708 2225 aa-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 TMEM114B3SHH9 223 aa-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 PIAS1O75925 651 aa-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 IFNA7P01567 189 aa-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 IFITM1P13164 125 aa-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 TMBIM6P55061 237 aa-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 AKIRIN2Q53H80 203 aa-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 VMO1Q7Z5L0 202 aa-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 ARL5BQ96KC2 179 aa-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 GPX7Q96SL4 187 aaPredicted RBP-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 CACYBPQ9HB71 228 aaKnown RBP-0.47□□□□□ -2.48
HDDC2-207ENST00000608532 TNXBP22105 4242 aa-0.47□□□□□ -2.49
HDDC2-207ENST00000608532 DLEC1Q9Y238 1755 aa-0.47□□□□□ -2.49
HDDC2-207ENST00000608532 NUP210Q8TEM1 1887 aaPredicted RBP-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 FAM208BQ5VWN6 2430 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 CHD9Q3L8U1 2897 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 MUC12Q9UKN1 5478 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 FXYD1O00168 92 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 RER1O15258 196 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 BANF1O75531 89 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 IGHV3-30P01768 117 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 TRGC2P03986 189 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 IGHV3-30-5P0DP03 117 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 RPS3P23396 243 aaKnown RBP eCLIP-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 CDKN2CP42773 168 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 NCALDP61601 193 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 HSPE1P61604 102 aaKnown RBP-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 FXYD3Q14802 87 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 ZNF56Q15929 161 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 LIN52Q52LA3 116 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 XAF1Q6GPH4 301 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 CSAG1Q6PB30 78 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 DEFB132Q7Z7B7 95 aa-0.48□□□□□ -2.49
HDDC2-207ENST00000608532 C5orf56Q8N8D9 126 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms