RNA–Protein interactions for RNA: ENST00000601806.5

PRKD2-216, Transcript of protein kinase D2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD2, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-216ENST00000601806 ZFAND3Q9H8U3 227 aa12.55□□□□□ -0.4
PRKD2-216ENST00000601806 TRBV7-1A0A0A6YYK4 115 aa12.55□□□□□ -0.4
PRKD2-216ENST00000601806 TRAV41A0A0B4J266 112 aa12.55□□□□□ -0.4
PRKD2-216ENST00000601806 FOXA3P55318 350 aaPredicted RBP12.55□□□□□ -0.4
PRKD2-216ENST00000601806 PIFOQ8TCI5 191 aa12.55□□□□□ -0.4
PRKD2-216ENST00000601806 TPPP3Q9BW30 176 aa12.55□□□□□ -0.4
PRKD2-216ENST00000601806 RNF114Q9Y508 228 aa12.55□□□□□ -0.4
PRKD2-216ENST00000601806 RAB9AP51151 201 aa12.55□□□□□ -0.4
PRKD2-216ENST00000601806 ATP5G2Q06055 141 aa12.55□□□□□ -0.4
PRKD2-216ENST00000601806 SRSF1Q07955 248 aaKnown RBP eCLIP12.55□□□□□ -0.4
PRKD2-216ENST00000601806 C1orf194Q5T5A4 169 aa12.55□□□□□ -0.4
PRKD2-216ENST00000601806 RNASEKQ6P5S7 137 aaKnown RBP12.55□□□□□ -0.4
PRKD2-216ENST00000601806 IGHV3-66A0A0C4DH42 116 aa12.54□□□□□ -0.4
PRKD2-216ENST00000601806 HLA-DMBP28068 263 aa12.54□□□□□ -0.4
PRKD2-216ENST00000601806 RELQ04864 619 aaPredicted RBP12.54□□□□□ -0.4
PRKD2-216ENST00000601806 LY6EQ16553 131 aa12.54□□□□□ -0.4
PRKD2-216ENST00000601806 BORCS7Q96B45 105 aa12.54□□□□□ -0.4
PRKD2-216ENST00000601806 MEGF9Q9H1U4 602 aa12.54□□□□□ -0.4
PRKD2-216ENST00000601806 A0A1B0GUT8 65 aa12.54□□□□□ -0.4
PRKD2-216ENST00000601806 HAX1O00165 279 aa12.54□□□□□ -0.4
PRKD2-216ENST00000601806 BUB3O43684 328 aa12.54□□□□□ -0.4
PRKD2-216ENST00000601806 CSMD2Q7Z408 3487 aa12.54□□□□□ -0.4
PRKD2-216ENST00000601806 IGHV3OR16-13A0A075B7E8 117 aa12.53□□□□□ -0.4
PRKD2-216ENST00000601806 IGHV3-74A0A0B4J1X5 117 aa12.53□□□□□ -0.4
PRKD2-216ENST00000601806 SAPCD1Q5SSQ6 148 aa12.53□□□□□ -0.4
PRKD2-216ENST00000601806 POLQO75417 2590 aa12.53□□□□□ -0.4
PRKD2-216ENST00000601806 A1L4Q6 167 aa12.53□□□□□ -0.4
PRKD2-216ENST00000601806 MSMBP08118 114 aa12.53□□□□□ -0.4
PRKD2-216ENST00000601806 ARMS2P0C7Q2 107 aa12.53□□□□□ -0.4
PRKD2-216ENST00000601806 ARL6IP6Q8N6S5 226 aa12.53□□□□□ -0.4
PRKD2-216ENST00000601806 NDUFAF3Q9BU61 184 aa12.53□□□□□ -0.4
PRKD2-216ENST00000601806 RIGQ13278 110 aa12.52□□□□□ -0.4
PRKD2-216ENST00000601806 TEX43Q6ZNM6 134 aa12.52□□□□□ -0.4
PRKD2-216ENST00000601806 NIT1Q86X76 327 aa12.52□□□□□ -0.4
PRKD2-216ENST00000601806 ZFHX3Q15911 3703 aa12.52□□□□□ -0.41
PRKD2-216ENST00000601806 TMSB15BA0A087X1C1 80 aa12.52□□□□□ -0.41
PRKD2-216ENST00000601806 ZNF207O43670 478 aaKnown RBP12.52□□□□□ -0.41
PRKD2-216ENST00000601806 APOHP02749 345 aaPredicted RBP12.52□□□□□ -0.41
PRKD2-216ENST00000601806 TDRG1Q3Y452 100 aa12.52□□□□□ -0.41
PRKD2-216ENST00000601806 Q8TAT8 98 aa12.52□□□□□ -0.41
PRKD2-216ENST00000601806 PRR25Q96S07 402 aa12.52□□□□□ -0.41
PRKD2-216ENST00000601806 IGHV3-49A0A0A0MS15 119 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 TMEM189A5PLL7 270 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 M0R2Z0 102 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 TRGV3P03979 118 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 FAM162BQ5T6X4 162 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 LCN12Q6JVE5 192 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 METTL26Q96S19 204 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 VGLL1Q99990 258 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 LOC102724200A0A096LPH7 203 aaPredicted RBP12.51□□□□□ -0.41
PRKD2-216ENST00000601806 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.51□□□□□ -0.41
PRKD2-216ENST00000601806 H3BUX3 64 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 SH2D1AO60880 128 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 VAMP8Q9BV40 100 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 PAM16Q9Y3D7 125 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 ANKRD17O75179 2603 aaKnown RBP12.51□□□□□ -0.41
PRKD2-216ENST00000601806 KIR2DL5BA0A0G2JN68 375 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 KIR2DL5BA0A0G2JPC4 375 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 CLPSL1A2RUU4 121 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 FBLL1A6NHQ2 334 aaKnown RBP12.51□□□□□ -0.41
PRKD2-216ENST00000601806 KIR2DL5AQ8N109 375 aa12.51□□□□□ -0.41
PRKD2-216ENST00000601806 IGHG4P01861 327 aa12.5□□□□□ -0.41
PRKD2-216ENST00000601806 C3orf79P0CE67 100 aa12.5□□□□□ -0.41
PRKD2-216ENST00000601806 Q6AWC8 147 aa12.5□□□□□ -0.41
PRKD2-216ENST00000601806 HIF1ANQ9NWT6 349 aa12.5□□□□□ -0.41
PRKD2-216ENST00000601806 USP9YO00507 2555 aaPredicted RBP12.5□□□□□ -0.41
PRKD2-216ENST00000601806 PTPN13Q12923 2485 aa12.5□□□□□ -0.41
PRKD2-216ENST00000601806 FAM223BA6NKX1 122 aa12.5□□□□□ -0.41
PRKD2-216ENST00000601806 SSTP61278 116 aa12.5□□□□□ -0.41
PRKD2-216ENST00000601806 FAM223AQ8IWN6 122 aa12.5□□□□□ -0.41
PRKD2-216ENST00000601806 FBN2P35556 2912 aa12.49□□□□□ -0.41
PRKD2-216ENST00000601806 COX6B1P14854 86 aa12.49□□□□□ -0.41
PRKD2-216ENST00000601806 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.49□□□□□ -0.414e-6■■■■□ 25.4
PRKD2-216ENST00000601806 A0A087X0K7 114 aa12.49□□□□□ -0.41
PRKD2-216ENST00000601806 M0QZ24 198 aa12.49□□□□□ -0.41
PRKD2-216ENST00000601806 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.49□□□□□ -0.41
PRKD2-216ENST00000601806 RNF182Q8N6D2 247 aa12.49□□□□□ -0.41
PRKD2-216ENST00000601806 NDFIP1Q9BT67 221 aa12.49□□□□□ -0.41
PRKD2-216ENST00000601806 B4DSR2 109 aa12.48□□□□□ -0.41
PRKD2-216ENST00000601806 CRIP2P52943 208 aaPredicted RBP12.48□□□□□ -0.41
PRKD2-216ENST00000601806 C19orf54Q5BKX5 351 aa12.48□□□□□ -0.41
PRKD2-216ENST00000601806 Q8N976 141 aa12.48□□□□□ -0.41
PRKD2-216ENST00000601806 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
PRKD2-216ENST00000601806 A0A1B0GW15 77 aa12.48□□□□□ -0.41
PRKD2-216ENST00000601806 BMI1P35226 326 aa12.48□□□□□ -0.41
PRKD2-216ENST00000601806 LYZL1Q6UWQ5 148 aa12.48□□□□□ -0.41
PRKD2-216ENST00000601806 ARL3P36405 182 aa12.47□□□□□ -0.41
PRKD2-216ENST00000601806 ERCC8Q13216 396 aa12.47□□□□□ -0.41
PRKD2-216ENST00000601806 URB1-AS1Q96HZ7 61 aa12.47□□□□□ -0.41
PRKD2-216ENST00000601806 A6NDX4 124 aa12.47□□□□□ -0.41
PRKD2-216ENST00000601806 FAM181BA6NEQ2 426 aa12.47□□□□□ -0.41
PRKD2-216ENST00000601806 PRAC2D3DTV9 90 aa12.47□□□□□ -0.41
PRKD2-216ENST00000601806 IGF1P05019 195 aa12.47□□□□□ -0.41
PRKD2-216ENST00000601806 COX8CQ7Z4L0 72 aa12.47□□□□□ -0.41
PRKD2-216ENST00000601806 ZNF80P51504 273 aaPredicted RBP12.46□□□□□ -0.41
PRKD2-216ENST00000601806 ABCA12Q86UK0 2595 aa12.46□□□□□ -0.41
PRKD2-216ENST00000601806 DSCR9P59020 149 aa12.46□□□□□ -0.42
PRKD2-216ENST00000601806 PMCHL1Q16048 86 aa12.46□□□□□ -0.42
PRKD2-216ENST00000601806 ATP6V0BQ99437 205 aa12.46□□□□□ -0.42
PRKD2-216ENST00000601806 CSPG4Q6UVK1 2322 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms