RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ZNF709Q8N972 641 aa9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 A8MTW9 85 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 COX7A2P2O60397 106 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 PRM2P04554 102 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 BTF3P20290 206 aaKnown RBP9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 CCL18P55774 89 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 H2BFSP57053 126 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 BAXQ07812 192 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 LRRC37A5PQ49AS3 106 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 FAM78BQ5VT40 261 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 MIC13Q5XKP0 118 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 IGFL4Q6B9Z1 124 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 EBLN2Q6P2I7 272 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 C1orf158Q8N1D5 194 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 RNF182Q8N6D2 247 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 OR4B1Q8NGF8 309 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 TMEM37Q8WXS4 190 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 SLC35B3Q9H1N7 401 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 Q9H8V8 135 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 OR5AC2Q9NZP5 309 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 RNF24Q9Y225 148 aa9.57□□□□□ -0.88
SHKBP1-208ENST00000595726 E5RGE8 158 aa9.56□□□□□ -0.88
SHKBP1-208ENST00000595726 H0YIZ8 118 aa9.56□□□□□ -0.88
SHKBP1-208ENST00000595726 RAB31Q13636 194 aa9.56□□□□□ -0.88
SHKBP1-208ENST00000595726 OPCMLQ14982 345 aa9.56□□□□□ -0.88
SHKBP1-208ENST00000595726 ATP6V1FQ16864 119 aa9.56□□□□□ -0.88
SHKBP1-208ENST00000595726 MORN5Q5VZ52 161 aa9.56□□□□□ -0.88
SHKBP1-208ENST00000595726 SSX7Q7RTT5 188 aa9.56□□□□□ -0.88
SHKBP1-208ENST00000595726 F5H768 121 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 SSNA1O43805 119 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 HBE1P02100 147 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 RLN2P04090 185 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 CXCL3P19876 107 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 FGF7P21781 194 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 RPL29P47914 159 aaKnown RBP9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 CYCSP99999 105 aaKnown RBP9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 PSG9Q00887 426 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 NHLH2Q02577 135 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 C10orf113Q5VZT2 155 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 AMTNQ6UX39 209 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 Q6ZRG5 221 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 CHAC2Q8WUX2 184 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 PPP1R1CQ8WVI7 109 aa9.55□□□□□ -0.88
SHKBP1-208ENST00000595726 DEFB130BP0DP73 79 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 DEFB130AP0DP74 79 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 CXCL2P19875 107 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 CNN1P51911 297 aaKnown RBP9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 KRTAP10-1P60331 282 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 B2MP61769 119 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 HAMPP81172 84 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 FCN2Q15485 313 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 BPIFA4PQ86YQ2 179 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 ZNF738Q8NE65 137 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 OR5C1Q8NGR4 320 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 OR1L4Q8NGR5 311 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 SLC25A31Q9H0C2 315 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 DNAJC4Q9NNZ3 241 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 SLC39A9Q9NUM3 307 aa9.54□□□□□ -0.88
SHKBP1-208ENST00000595726 MPDU1O75352 247 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 IGLC2P0DOY2 106 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 CLINT1Q14677 625 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 RRN3P1Q2M238 152 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 LCN15Q6UWW0 184 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 THAP6Q8TBB0 222 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 LRRC20Q8TCA0 184 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 RNF141Q8WVD5 230 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 PFDN5Q99471 154 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 NPCDR1Q9BY65 106 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 ZNF331Q9NQX6 463 aaPredicted RBP9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 PGPEP1Q9NXJ5 209 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 GOLT1BQ9Y3E0 138 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 PXMP4Q9Y6I8 212 aa9.53□□□□□ -0.88
SHKBP1-208ENST00000595726 LRP1Q07954 4544 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-208ENST00000595726 SLC17A3O00476 420 aa9.52□□□□□ -0.89
SHKBP1-208ENST00000595726 DUSP14O95147 198 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-208ENST00000595726 MPC2O95563 127 aa9.52□□□□□ -0.89
SHKBP1-208ENST00000595726 PTTG1O95997 202 aa9.52□□□□□ -0.89
SHKBP1-208ENST00000595726 SNRPCP09234 159 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-208ENST00000595726 PSG3Q16557 428 aa9.52□□□□□ -0.89
SHKBP1-208ENST00000595726 OR11H7Q8NGC8 314 aa9.52□□□□□ -0.89
SHKBP1-208ENST00000595726 SLC50A1Q9BRV3 221 aa9.52□□□□□ -0.89
SHKBP1-208ENST00000595726 Q9H3A6 140 aa9.52□□□□□ -0.89
SHKBP1-208ENST00000595726 TRAV5A0A0B4J249 113 aa9.51□□□□□ -0.89
SHKBP1-208ENST00000595726 ZNF705GA8MUZ8 300 aaPredicted RBP9.51□□□□□ -0.89
SHKBP1-208ENST00000595726 H3BTX0 84 aa9.51□□□□□ -0.89
SHKBP1-208ENST00000595726 PET100P0DJ07 73 aa9.51□□□□□ -0.89
SHKBP1-208ENST00000595726 OR8A1Q8NGG7 326 aa9.51□□□□□ -0.89
SHKBP1-208ENST00000595726 ZNF586Q9NXT0 402 aa9.51□□□□□ -0.89
SHKBP1-208ENST00000595726 ALG5Q9Y673 324 aa9.51□□□□□ -0.89
SHKBP1-208ENST00000595726 H3BQ15 152 aa9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 FAM229AH3BQW9 127 aa9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 M0R2Z0 102 aa9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 CRXO43186 299 aaPredicted RBP9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 PRB4P10163 310 aaPredicted RBP9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 HIST1H1AQ02539 215 aaPredicted RBP9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 SPINK13Q1W4C9 94 aa9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 TTC32Q5I0X7 151 aa9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 GCSAMLQ5JQS6 135 aa9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 RPUSD4Q96CM3 377 aaKnown RBP9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 SAT2Q96F10 170 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms